RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C CPS1P27614 576 aa3.58□□□□□ -1.84
SSN2YDR443C BIM1P40013 344 aa3.58□□□□□ -1.84
SSN2YDR443C FAR11P53917 953 aa3.58□□□□□ -1.84
SSN2YDR443C RPL34AP87262 121 aaPredicted RBP3.58□□□□□ -1.84
SSN2YDR443C VPS72Q03388 795 aa3.58□□□□□ -1.84
SSN2YDR443C BUD21Q08492 214 aaPredicted RBP3.58□□□□□ -1.84
SSN2YDR443C HIR3P47171 1648 aa3.58□□□□□ -1.84
SSN2YDR443C ATF2P53296 535 aa3.57□□□□□ -1.84
SSN2YDR443C ERG12P07277 443 aa3.57□□□□□ -1.84
SSN2YDR443C ATG32P40458 529 aa3.57□□□□□ -1.84
SSN2YDR443C AIM7Q12156 149 aa3.57□□□□□ -1.84
SSN2YDR443C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SSN2YDR443C SSA4P22202 642 aaKnown RBP3.56□□□□□ -1.84
SSN2YDR443C SSF1P38789 453 aaPredicted RBP3.56□□□□□ -1.84
SSN2YDR443C ITT1Q04638 464 aa3.56□□□□□ -1.84
SSN2YDR443C HAT1Q12341 374 aa3.55□□□□□ -1.84
SSN2YDR443C SSK2P53599 1579 aa3.54□□□□□ -1.84
SSN2YDR443C BUD4P47136 1447 aa3.54□□□□□ -1.84
SSN2YDR443C GIN4Q12263 1142 aa3.54□□□□□ -1.84
SSN2YDR443C TPO2P53283 614 aa3.54□□□□□ -1.84
SSN2YDR443C PEP1P32319 1579 aa3.54□□□□□ -1.84
SSN2YDR443C GLN1P32288 370 aaKnown RBP3.54□□□□□ -1.84
SSN2YDR443C CDC3P32457 520 aaKnown RBP3.54□□□□□ -1.84
SSN2YDR443C RCR1P38212 213 aa3.54□□□□□ -1.84
SSN2YDR443C RPL34BP40525 121 aaKnown RBP3.54□□□□□ -1.84
SSN2YDR443C ASF1P32447 279 aa3.53□□□□□ -1.84
SSN2YDR443C HPC2Q01448 625 aa3.53□□□□□ -1.84
SSN2YDR443C SPA2P23201 1466 aaKnown RBP3.53□□□□□ -1.84
SSN2YDR443C HEM3P28789 327 aa3.53□□□□□ -1.84
SSN2YDR443C NUP42P49686 430 aaKnown RBP3.53□□□□□ -1.84
SSN2YDR443C PRI1P10363 409 aa3.53□□□□□ -1.84
SSN2YDR443C YPR204WQ08995 1032 aa3.53□□□□□ -1.84
SSN2YDR443C MDS3P53094 1487 aa3.53□□□□□ -1.84
SSN2YDR443C OCA5P38738 679 aa3.53□□□□□ -1.85
SSN2YDR443C SEN54Q02825 467 aaPredicted RBP3.52□□□□□ -1.85
SSN2YDR443C CST6P40535 587 aa3.52□□□□□ -1.85
SSN2YDR443C SIN3P22579 1536 aa3.52□□□□□ -1.85
SSN2YDR443C PSD2P53037 1138 aaKnown RBP3.51□□□□□ -1.85
SSN2YDR443C YML083CQ04526 418 aa3.51□□□□□ -1.85
SSN2YDR443C NOB1Q08444 459 aaKnown RBP3.51□□□□□ -1.85
SSN2YDR443C TSR4P25040 408 aa3.51□□□□□ -1.85
SSN2YDR443C IPL1P38991 367 aa3.51□□□□□ -1.85
SSN2YDR443C RNH70P53331 553 aa3.51□□□□□ -1.85
SSN2YDR443C AAD16Q02895 342 aa3.51□□□□□ -1.85
SSN2YDR443C ALD2P47771 506 aa3.5□□□□□ -1.85
SSN2YDR443C YAF9P53930 226 aa3.5□□□□□ -1.85
SSN2YDR443C ATG2P53855 1592 aa3.5□□□□□ -1.85
SSN2YDR443C TIF1P10081 395 aaKnown RBP3.5□□□□□ -1.85
SSN2YDR443C PDR1P12383 1068 aa3.5□□□□□ -1.85
SSN2YDR443C PPG1P32838 368 aa3.5□□□□□ -1.85
SSN2YDR443C AIM21P40563 679 aa3.5□□□□□ -1.85
SSN2YDR443C AI2P03876 854 aa3.5□□□□□ -1.85
SSN2YDR443C UBX5Q06682 500 aa3.5□□□□□ -1.85
SSN2YDR443C MAK21Q12176 1025 aaKnown RBP3.49□□□□□ -1.85
SSN2YDR443C REV3P14284 1504 aa3.49□□□□□ -1.85
SSN2YDR443C TOM20P35180 183 aa3.48□□□□□ -1.85
SSN2YDR443C DOS2P54858 310 aa3.48□□□□□ -1.85
SSN2YDR443C TTI1P36097 1038 aa3.48□□□□□ -1.85
SSN2YDR443C ZDS1P50111 915 aaKnown RBP3.48□□□□□ -1.85
SSN2YDR443C OSW7P43611 510 aa3.47□□□□□ -1.85
SSN2YDR443C JIP5Q06214 492 aaPredicted RBP3.47□□□□□ -1.85
SSN2YDR443C ECM5Q03214 1411 aa3.47□□□□□ -1.85
SSN2YDR443C RTG2P32608 588 aaKnown RBP3.47□□□□□ -1.85
SSN2YDR443C DCD1P06773 312 aa3.47□□□□□ -1.85
SSN2YDR443C HOP09932 586 aa3.47□□□□□ -1.85
SSN2YDR443C KRI1P42846 591 aaKnown RBP3.47□□□□□ -1.85
SSN2YDR443C MRM1P25270 412 aa3.47□□□□□ -1.85
SSN2YDR443C REF2P42073 533 aaPredicted RBP3.47□□□□□ -1.85
SSN2YDR443C CSN12P47130 423 aa3.47□□□□□ -1.85
SSN2YDR443C NNF1P47149 201 aa3.47□□□□□ -1.85
SSN2YDR443C NMD2P38798 1089 aaKnown RBP3.46□□□□□ -1.86
SSN2YDR443C RPA135P22138 1203 aaKnown RBP3.46□□□□□ -1.86
SSN2YDR443C FPR4Q06205 392 aaPredicted RBP3.46□□□□□ -1.86
SSN2YDR443C TSR3Q12094 313 aaKnown RBP3.45□□□□□ -1.86
SSN2YDR443C PMC1P38929 1173 aaPredicted RBP3.45□□□□□ -1.86
SSN2YDR443C YNL108CP53929 270 aa3.45□□□□□ -1.86
SSN2YDR443C KEX1P09620 729 aa3.44□□□□□ -1.86
SSN2YDR443C YKR023WP36119 530 aaKnown RBP3.44□□□□□ -1.86
SSN2YDR443C YFR016CP43597 1233 aaKnown RBP3.44□□□□□ -1.86
SSN2YDR443C KIP3P53086 805 aaKnown RBP3.44□□□□□ -1.86
SSN2YDR443C YBL036CP38197 257 aa3.44□□□□□ -1.86
SSN2YDR443C TYW1Q08960 810 aaKnown RBP3.44□□□□□ -1.86
SSN2YDR443C SSA2P10592 639 aaKnown RBP3.44□□□□□ -1.86
SSN2YDR443C BIO2P32451 375 aa3.44□□□□□ -1.86
SSN2YDR443C THI12P42883 340 aa3.43□□□□□ -1.86
SSN2YDR443C THI5P43534 340 aa3.43□□□□□ -1.86
SSN2YDR443C THI11P47183 340 aa3.43□□□□□ -1.86
SSN2YDR443C THI13Q07748 340 aa3.43□□□□□ -1.86
SSN2YDR443C YBL113CQ7M4S9 792 aa3.43□□□□□ -1.86
SSN2YDR443C ATE1P16639 503 aa3.43□□□□□ -1.86
SSN2YDR443C RRP14P36080 434 aaKnown RBP3.43□□□□□ -1.86
SSN2YDR443C POL32P47110 350 aa3.43□□□□□ -1.86
SSN2YDR443C OYE2Q03558 400 aaKnown RBP3.43□□□□□ -1.86
SSN2YDR443C ECM16Q04217 1267 aaKnown RBP3.43□□□□□ -1.86
SSN2YDR443C YOL057WQ08225 711 aa3.43□□□□□ -1.86
SSN2YDR443C BPT1P14772 1559 aa3.43□□□□□ -1.86
SSN2YDR443C PUP1P25043 261 aa3.43□□□□□ -1.86
SSN2YDR443C SRP40P32583 406 aaPredicted RBP3.43□□□□□ -1.86
SSN2YDR443C HAA1Q12753 694 aaKnown RBP3.43□□□□□ -1.86
SSN2YDR443C COQ8P27697 501 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms