RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W KRI1P42846 591 aaKnown RBP7.64□□□□□ -1.19
VMS1YDR049W YPR148CQ06523 435 aa7.64□□□□□ -1.19
VMS1YDR049W YFR016CP43597 1233 aaKnown RBP7.62□□□□□ -1.19
VMS1YDR049W SLD2P34252 453 aa7.62□□□□□ -1.19
VMS1YDR049W DSF2P38213 736 aa7.62□□□□□ -1.19
VMS1YDR049W YIL055CP40523 627 aaKnown RBP7.62□□□□□ -1.19
VMS1YDR049W GUA1P38625 525 aaKnown RBP7.59□□□□□ -1.19
VMS1YDR049W AIM7Q12156 149 aa7.59□□□□□ -1.19
VMS1YDR049W YJR008WP47085 338 aa7.58□□□□□ -1.2
VMS1YDR049W MST1P07236 462 aa7.58□□□□□ -1.2
VMS1YDR049W OSW7P43611 510 aa7.58□□□□□ -1.2
VMS1YDR049W YOR238WQ08634 303 aa7.58□□□□□ -1.2
VMS1YDR049W SET1P38827 1080 aaKnown RBP7.57□□□□□ -1.2
VMS1YDR049W TPO2P53283 614 aa7.57□□□□□ -1.2
VMS1YDR049W GLC3P32775 704 aa7.56□□□□□ -1.2
VMS1YDR049W RRN6P32786 894 aa7.56□□□□□ -1.2
VMS1YDR049W SSF1P38789 453 aaPredicted RBP7.55□□□□□ -1.2
VMS1YDR049W SIS2P36024 562 aa7.54□□□□□ -1.2
VMS1YDR049W OCA5P38738 679 aa7.53□□□□□ -1.2
VMS1YDR049W YBL029C-AQ3E756 94 aa7.53□□□□□ -1.2
VMS1YDR049W PBS2P08018 668 aa7.51□□□□□ -1.21
VMS1YDR049W BBC1P47068 1157 aa7.51□□□□□ -1.21
VMS1YDR049W HPC2Q01448 625 aa7.51□□□□□ -1.21
VMS1YDR049W CST9Q06032 482 aa7.51□□□□□ -1.21
VMS1YDR049W HEM3P28789 327 aa7.49□□□□□ -1.21
VMS1YDR049W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
VMS1YDR049W BUD21Q08492 214 aaPredicted RBP7.49□□□□□ -1.21
VMS1YDR049W NSR1P27476 414 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
VMS1YDR049W YAF9P53930 226 aa7.47□□□□□ -1.21
VMS1YDR049W NAB3P38996 802 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
VMS1YDR049W RPS0BP46654 252 aaKnown RBP7.47□□□□□ -1.21
VMS1YDR049W RSM7P47150 247 aa7.47□□□□□ -1.21
VMS1YDR049W TFB3Q03290 321 aa7.47□□□□□ -1.21
VMS1YDR049W SSA4P22202 642 aaKnown RBP7.46□□□□□ -1.22
VMS1YDR049W SEN54Q02825 467 aaPredicted RBP7.46□□□□□ -1.22
VMS1YDR049W FPR4Q06205 392 aaPredicted RBP7.46□□□□□ -1.22
VMS1YDR049W PDR1P12383 1068 aa7.45□□□□□ -1.22
VMS1YDR049W YAP5P40574 245 aa7.45□□□□□ -1.22
VMS1YDR049W VNX1P42839 908 aa7.44□□□□□ -1.22
VMS1YDR049W ALD4P46367 519 aaKnown RBP7.43□□□□□ -1.22
VMS1YDR049W AI2P03876 854 aa7.43□□□□□ -1.22
VMS1YDR049W RAM2P29703 316 aa7.43□□□□□ -1.22
VMS1YDR049W NMD2P38798 1089 aaKnown RBP7.43□□□□□ -1.22
VMS1YDR049W UBX5Q06682 500 aa7.42□□□□□ -1.22
VMS1YDR049W CDC3P32457 520 aaKnown RBP7.41□□□□□ -1.22
VMS1YDR049W SPP1Q03012 353 aa7.4□□□□□ -1.23
VMS1YDR049W MAK21Q12176 1025 aaKnown RBP7.4□□□□□ -1.23
VMS1YDR049W DIT2P21595 489 aa7.39□□□□□ -1.23
VMS1YDR049W RPL34AP87262 121 aaPredicted RBP7.39□□□□□ -1.23
VMS1YDR049W KEX1P09620 729 aa7.38□□□□□ -1.23
VMS1YDR049W TOA1P32773 286 aa7.38□□□□□ -1.23
VMS1YDR049W TOM20P35180 183 aa7.38□□□□□ -1.23
VMS1YDR049W ZDS1P50111 915 aaKnown RBP7.38□□□□□ -1.23
VMS1YDR049W ITT1Q04638 464 aa7.38□□□□□ -1.23
VMS1YDR049W NUP42P49686 430 aaKnown RBP7.38□□□□□ -1.23
VMS1YDR049W PKC1P24583 1151 aa7.37□□□□□ -1.23
VMS1YDR049W BIM1P40013 344 aa7.37□□□□□ -1.23
VMS1YDR049W IES2P40154 320 aa7.37□□□□□ -1.23
VMS1YDR049W WSC3Q12215 556 aa7.37□□□□□ -1.23
VMS1YDR049W CST6P40535 587 aa7.36□□□□□ -1.23
VMS1YDR049W NNF1P47149 201 aa7.36□□□□□ -1.23
VMS1YDR049W GLN1P32288 370 aaKnown RBP7.35□□□□□ -1.23
VMS1YDR049W HIF1Q12373 385 aa7.34□□□□□ -1.23
VMS1YDR049W ATG32P40458 529 aa7.34□□□□□ -1.23
VMS1YDR049W GTT3P39996 337 aa7.33□□□□□ -1.24
VMS1YDR049W KIP3P53086 805 aaKnown RBP7.33□□□□□ -1.24
VMS1YDR049W YJL007CP47080 104 aa7.32□□□□□ -1.24
VMS1YDR049W ATF2P53296 535 aa7.32□□□□□ -1.24
VMS1YDR049W PSD2P53037 1138 aaKnown RBP7.32□□□□□ -1.24
VMS1YDR049W CPS1P27614 576 aa7.31□□□□□ -1.24
VMS1YDR049W RNH70P53331 553 aa7.31□□□□□ -1.24
VMS1YDR049W CWC22P53333 577 aaKnown RBP7.31□□□□□ -1.24
VMS1YDR049W NOB1Q08444 459 aaKnown RBP7.3□□□□□ -1.24
VMS1YDR049W TIF11P38912 153 aaKnown RBP7.3□□□□□ -1.24
VMS1YDR049W YJL171CP46992 396 aa7.3□□□□□ -1.24
VMS1YDR049W BRE1Q07457 700 aaKnown RBP7.3□□□□□ -1.24
VMS1YDR049W HAT1Q12341 374 aa7.3□□□□□ -1.24
VMS1YDR049W TY4A-JP47023 414 aa7.29□□□□□ -1.24
VMS1YDR049W ISW1P38144 1129 aa7.28□□□□□ -1.24
VMS1YDR049W ALD2P47771 506 aa7.28□□□□□ -1.24
VMS1YDR049W PMC1P38929 1173 aaPredicted RBP7.28□□□□□ -1.24
VMS1YDR049W TSR4P25040 408 aa7.27□□□□□ -1.25
VMS1YDR049W RRP14P36080 434 aaKnown RBP7.27□□□□□ -1.25
VMS1YDR049W TPM2P40414 161 aa7.26□□□□□ -1.25
VMS1YDR049W AIM21P40563 679 aa7.26□□□□□ -1.25
VMS1YDR049W GAL11P19659 1081 aa7.26□□□□□ -1.25
VMS1YDR049W FPR3P38911 411 aaKnown RBP7.26□□□□□ -1.25
VMS1YDR049W IPL1P38991 367 aa7.26□□□□□ -1.25
VMS1YDR049W TIF1P10081 395 aaKnown RBP7.25□□□□□ -1.25
VMS1YDR049W SSA2P10592 639 aaKnown RBP7.25□□□□□ -1.25
VMS1YDR049W TTI1P36097 1038 aa7.25□□□□□ -1.25
VMS1YDR049W RPL34BP40525 121 aaKnown RBP7.25□□□□□ -1.25
VMS1YDR049W AIR2Q12476 344 aaKnown RBP7.25□□□□□ -1.25
VMS1YDR049W ERG12P07277 443 aa7.24□□□□□ -1.25
VMS1YDR049W EBP2P36049 427 aaKnown RBP7.24□□□□□ -1.25
VMS1YDR049W RPT2P40327 437 aaKnown RBP7.24□□□□□ -1.25
VMS1YDR049W SVF1Q05515 481 aa7.24□□□□□ -1.25
VMS1YDR049W RLP24Q07915 199 aaKnown RBP7.24□□□□□ -1.25
VMS1YDR049W YOL098CQ12496 1037 aa7.24□□□□□ -1.25
VMS1YDR049W PPG1P32838 368 aa7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms