RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B YDR344CQ05510 147 aa5.9□□□□□ -1.46
HTL1YCR020W-B YDL129WQ07555 291 aa5.9□□□□□ -1.46
HTL1YCR020W-B YEL023CP39992 682 aa5.88□□□□□ -1.47
HTL1YCR020W-B TFG1P41895 735 aaPredicted RBP5.88□□□□□ -1.47
HTL1YCR020W-B MIF2P35201 549 aa5.86□□□□□ -1.47
HTL1YCR020W-B PTC4P38089 393 aa5.85□□□□□ -1.47
HTL1YCR020W-B CHL1P22516 861 aaPredicted RBP5.84□□□□□ -1.47
HTL1YCR020W-B EDS1P38073 919 aa5.84□□□□□ -1.47
HTL1YCR020W-B PRE3P38624 215 aa5.84□□□□□ -1.47
HTL1YCR020W-B RAM2P29703 316 aa5.83□□□□□ -1.48
HTL1YCR020W-B RGA1P39083 1007 aa5.83□□□□□ -1.48
HTL1YCR020W-B NST1P53935 1240 aa5.83□□□□□ -1.48
HTL1YCR020W-B MAK11P20484 414 aaKnown RBP5.81□□□□□ -1.48
HTL1YCR020W-B GRE2Q12068 342 aaKnown RBP5.81□□□□□ -1.48
HTL1YCR020W-B PTC3P34221 468 aaKnown RBP5.78□□□□□ -1.48
HTL1YCR020W-B ATH1P48016 1211 aa5.78□□□□□ -1.48
HTL1YCR020W-B SOL3P38858 249 aa5.77□□□□□ -1.49
HTL1YCR020W-B PML39Q03760 334 aa5.77□□□□□ -1.49
HTL1YCR020W-B COQ8P27697 501 aa5.75□□□□□ -1.49
HTL1YCR020W-B GUT1P32190 709 aa5.74□□□□□ -1.49
HTL1YCR020W-B XDJ1P39102 459 aa5.74□□□□□ -1.49
HTL1YCR020W-B ILV3P39522 585 aaKnown RBP5.74□□□□□ -1.49
HTL1YCR020W-B MID1P41821 548 aa5.72□□□□□ -1.49
HTL1YCR020W-B VRP1P37370 817 aa5.7□□□□□ -1.5
HTL1YCR020W-B DPS1P04802 557 aaKnown RBP5.69□□□□□ -1.5
HTL1YCR020W-B ARH1P48360 493 aa5.69□□□□□ -1.5
HTL1YCR020W-B ELP4Q02884 456 aaKnown RBP5.69□□□□□ -1.5
HTL1YCR020W-B MPH3P0CE00 602 aa5.67□□□□□ -1.5
HTL1YCR020W-B AI4P03878 556 aa5.66□□□□□ -1.5
HTL1YCR020W-B PEX29Q03370 554 aa5.62□□□□□ -1.51
HTL1YCR020W-B YGR273CP53329 174 aa5.61□□□□□ -1.51
HTL1YCR020W-B SPT23P35210 1082 aa5.59□□□□□ -1.51
HTL1YCR020W-B MPC54Q08550 464 aa5.59□□□□□ -1.51
HTL1YCR020W-B HAP5Q02516 242 aa5.58□□□□□ -1.52
HTL1YCR020W-B SRC1Q03707 834 aa5.58□□□□□ -1.52
HTL1YCR020W-B NOP53Q12080 455 aaKnown RBP5.58□□□□□ -1.52
HTL1YCR020W-B BNI4P53858 892 aa5.57□□□□□ -1.52
HTL1YCR020W-B SET1P38827 1080 aaKnown RBP5.55□□□□□ -1.52
HTL1YCR020W-B SLI15P38283 698 aa5.54□□□□□ -1.52
HTL1YCR020W-B YML082WQ04533 649 aaKnown RBP5.54□□□□□ -1.52
HTL1YCR020W-B YPR015CQ12531 247 aa5.53□□□□□ -1.52
HTL1YCR020W-B PTC2P39966 464 aaKnown RBP5.51□□□□□ -1.53
HTL1YCR020W-B RAM1P22007 431 aa5.5□□□□□ -1.53
HTL1YCR020W-B NMA111P53920 997 aa5.5□□□□□ -1.53
HTL1YCR020W-B KEX1P09620 729 aa5.48□□□□□ -1.53
HTL1YCR020W-B DPL1Q05567 589 aa5.48□□□□□ -1.53
HTL1YCR020W-B VHR2P40041 505 aa5.47□□□□□ -1.53
HTL1YCR020W-B RAS1P01119 309 aa5.44□□□□□ -1.54
HTL1YCR020W-B YLR326WQ06170 240 aaKnown RBP5.44□□□□□ -1.54
HTL1YCR020W-B CDC73Q06697 393 aa5.44□□□□□ -1.54
HTL1YCR020W-B UBP14P38237 781 aaKnown RBP5.43□□□□□ -1.54
HTL1YCR020W-B SDH2P21801 266 aa5.42□□□□□ -1.54
HTL1YCR020W-B RAD54P32863 898 aa5.4□□□□□ -1.54
HTL1YCR020W-B ISU2Q12056 156 aa5.4□□□□□ -1.54
HTL1YCR020W-B PDR1P12383 1068 aa5.39□□□□□ -1.55
HTL1YCR020W-B PCS60P38137 543 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
HTL1YCR020W-B KIC1P38692 1080 aa5.37□□□□□ -1.55
HTL1YCR020W-B IFH1P39520 1085 aa5.36□□□□□ -1.55
HTL1YCR020W-B RPP1BP10622 106 aaKnown RBP5.35□□□□□ -1.55
HTL1YCR020W-B GYP1Q08484 637 aa5.34□□□□□ -1.55
HTL1YCR020W-B AMS1P22855 1083 aa5.33□□□□□ -1.56
HTL1YCR020W-B YDR090CQ03193 310 aa5.33□□□□□ -1.56
HTL1YCR020W-B REF2P42073 533 aaPredicted RBP5.32□□□□□ -1.56
HTL1YCR020W-B VPS70P47161 811 aa5.32□□□□□ -1.56
HTL1YCR020W-B PEX21P50091 288 aa5.31□□□□□ -1.56
HTL1YCR020W-B GAP1P19145 602 aaPredicted RBP5.3□□□□□ -1.56
HTL1YCR020W-B YRR1Q12172 810 aa5.29□□□□□ -1.56
HTL1YCR020W-B YPL062WQ02781 134 aa5.28□□□□□ -1.56
HTL1YCR020W-B YPR148CQ06523 435 aa5.28□□□□□ -1.56
HTL1YCR020W-B TRK1P12685 1235 aa5.27□□□□□ -1.57
HTL1YCR020W-B STR2P47164 639 aa5.27□□□□□ -1.57
HTL1YCR020W-B BUD20Q08004 166 aaPredicted RBP5.27□□□□□ -1.57
HTL1YCR020W-B SAS4Q04003 481 aa5.26□□□□□ -1.57
HTL1YCR020W-B TUM1Q08686 304 aaKnown RBP5.26□□□□□ -1.57
HTL1YCR020W-B ISM1P48526 1002 aa5.24□□□□□ -1.57
HTL1YCR020W-B CSC1Q06538 782 aa5.24□□□□□ -1.57
HTL1YCR020W-B COX6P00427 148 aa5.22□□□□□ -1.57
HTL1YCR020W-B ORC6P38826 435 aa5.22□□□□□ -1.57
HTL1YCR020W-B TFB4Q12004 338 aa5.22□□□□□ -1.57
HTL1YCR020W-B TY1A-DR4O74302 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B PRT1P06103 763 aaKnown RBP5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-HP0C2I4 478 aaKnown RBP5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-AP0CX57 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-PR1P0CX58 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-ORP0CX59 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-PR2P0CX60 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-DR5P0CX65 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-ER2P0CX66 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-GR3P0CX67 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-LR1P0CX68 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-MR2P0CX69 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B NUD1P32336 851 aa5.21□□□□□ -1.58
HTL1YCR020W-B NPL4P33755 580 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-JR2P47099 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-DR1Q03856 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-ML1Q04706 440 aaKnown RBP5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-BRQ12217 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-NL2Q12470 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B TY1A-GR2Q12485 440 aa5.21□□□□□ -1.58
HTL1YCR020W-B YEL077CQ3E7X8 1277 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms