RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeastyeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT2YCR005C TY1B-PR2P0C2J0 1756 aa11□□□□□ -0.65
CIT2YCR005C TY1B-PR3P0C2J1 1755 aaKnown RBP11□□□□□ -0.65
CIT2YCR005C TY1B-JR1P47098 1755 aa11□□□□□ -0.65
CIT2YCR005C TY1B-ML2Q03434 1755 aaKnown RBP11□□□□□ -0.65
CIT2YCR005C TY1B-ER1Q03612 1755 aa11□□□□□ -0.65
CIT2YCR005C TY1B-ML1Q04711 1755 aaKnown RBP11□□□□□ -0.65
CIT2YCR005C TY1B-GR2Q12269 1755 aa11□□□□□ -0.65
CIT2YCR005C TY1B-OLQ12273 1755 aa11□□□□□ -0.65
CIT2YCR005C TY1B-PLQ12414 1755 aaKnown RBP11□□□□□ -0.65
CIT2YCR005C SPP41P38904 1435 aa10.98□□□□□ -0.65
CIT2YCR005C YGL015CP33199 130 aa10.96□□□□□ -0.65
CIT2YCR005C DCD1P06773 312 aa10.94□□□□□ -0.66
CIT2YCR005C RSM7P47150 247 aa10.94□□□□□ -0.66
CIT2YCR005C TRM732Q03496 1420 aa10.93□□□□□ -0.66
CIT2YCR005C SAS10Q12136 610 aaPredicted RBP10.91□□□□□ -0.66
CIT2YCR005C DNF1P32660 1571 aa10.9□□□□□ -0.66
CIT2YCR005C TSC11P40061 1430 aa10.89□□□□□ -0.67
CIT2YCR005C VTH1P40438 1549 aa10.88□□□□□ -0.67
CIT2YCR005C VTH2P40890 1549 aa10.88□□□□□ -0.67
CIT2YCR005C RPA190P10964 1664 aaKnown RBP10.87□□□□□ -0.67
CIT2YCR005C UBP10P53874 792 aaPredicted RBP10.85□□□□□ -0.67
CIT2YCR005C TAF7Q05021 590 aa10.85□□□□□ -0.67
CIT2YCR005C YLR271WQ06152 274 aa10.85□□□□□ -0.67
CIT2YCR005C STH1P32597 1359 aa10.84□□□□□ -0.67
CIT2YCR005C SNQ2P32568 1501 aaKnown RBP10.84□□□□□ -0.67
CIT2YCR005C MET5P47169 1442 aa10.82□□□□□ -0.68
CIT2YCR005C BCH2P36122 765 aa10.81□□□□□ -0.68
CIT2YCR005C BBC1P47068 1157 aa10.8□□□□□ -0.68
CIT2YCR005C TY1B-JR2P47100 1755 aaKnown RBP10.8□□□□□ -0.68
CIT2YCR005C TY1B-ER2Q03619 1755 aa10.8□□□□□ -0.68
CIT2YCR005C TY1B-MR1Q04214 1755 aa10.8□□□□□ -0.68
CIT2YCR005C TY1B-MR2Q04670 1755 aaKnown RBP10.8□□□□□ -0.68
CIT2YCR005C TY1B-LR1Q12088 1755 aaKnown RBP10.8□□□□□ -0.68
CIT2YCR005C TY1B-NL1Q12112 1755 aa10.8□□□□□ -0.68
CIT2YCR005C TY1B-GR1Q12141 1755 aa10.8□□□□□ -0.68
CIT2YCR005C TY1B-BLQ12490 1755 aa10.8□□□□□ -0.68
CIT2YCR005C NTE1Q04958 1679 aa10.79□□□□□ -0.68
CIT2YCR005C MLP2P40457 1679 aa10.79□□□□□ -0.68
CIT2YCR005C NUP159P40477 1460 aa10.76□□□□□ -0.69
CIT2YCR005C RTT106P40161 455 aa10.75□□□□□ -0.69
CIT2YCR005C RPO21P04050 1733 aaKnown RBP10.73□□□□□ -0.69
CIT2YCR005C PDR15Q04182 1529 aaKnown RBP10.73□□□□□ -0.69
CIT2YCR005C AI2P03876 854 aa10.73□□□□□ -0.69
CIT2YCR005C MGA2P40578 1113 aa10.73□□□□□ -0.69
CIT2YCR005C SNT2P53127 1403 aa10.7□□□□□ -0.7
CIT2YCR005C IFH1P39520 1085 aa10.7□□□□□ -0.7
CIT2YCR005C SCY1P53009 804 aa10.68□□□□□ -0.7
CIT2YCR005C ULS1Q08562 1619 aa10.68□□□□□ -0.7
CIT2YCR005C MAP2P38174 421 aaKnown RBP10.67□□□□□ -0.7
CIT2YCR005C GEA2P39993 1459 aaKnown RBP10.66□□□□□ -0.7
CIT2YCR005C EPS1P40557 701 aa10.65□□□□□ -0.71
CIT2YCR005C LTE1P07866 1435 aa10.64□□□□□ -0.71
CIT2YCR005C YRF1-1P0CX20 1796 aa10.63□□□□□ -0.71
CIT2YCR005C YRF1-5P0CX21 1796 aa10.63□□□□□ -0.71
CIT2YCR005C YRF1-8P0CX22 1796 aa10.63□□□□□ -0.71
CIT2YCR005C VPS15P22219 1454 aa10.63□□□□□ -0.71
CIT2YCR005C MET10P39692 1035 aa10.62□□□□□ -0.71
CIT2YCR005C GEA1P47102 1408 aaPredicted RBP10.6□□□□□ -0.71
CIT2YCR005C PSD2P53037 1138 aaKnown RBP10.6□□□□□ -0.71
CIT2YCR005C SLX5P32828 619 aaKnown RBP10.57□□□□□ -0.72
CIT2YCR005C BDF1P35817 686 aa10.56□□□□□ -0.72
CIT2YCR005C IRC20Q06554 1556 aa10.54□□□□□ -0.72
CIT2YCR005C PDR12Q02785 1511 aa10.54□□□□□ -0.72
CIT2YCR005C SPO14P36126 1683 aa10.52□□□□□ -0.72
CIT2YCR005C CAT8P39113 1433 aa10.51□□□□□ -0.73
CIT2YCR005C NUP157P40064 1391 aaKnown RBP10.5□□□□□ -0.73
CIT2YCR005C GDB1Q06625 1536 aa10.5□□□□□ -0.73
CIT2YCR005C TIF4632P39936 914 aaKnown RBP10.49□□□□□ -0.73
CIT2YCR005C DRS2P39524 1355 aa10.48□□□□□ -0.73
CIT2YCR005C NUP170P38181 1502 aa10.47□□□□□ -0.73
CIT2YCR005C CST9Q06032 482 aa10.47□□□□□ -0.73
CIT2YCR005C TY3B-GQ99315 1547 aa10.46□□□□□ -0.74
CIT2YCR005C PDR10P51533 1564 aa10.46□□□□□ -0.74
CIT2YCR005C YBT1P32386 1661 aa10.45□□□□□ -0.74
CIT2YCR005C IKI3Q06706 1349 aaKnown RBP10.44□□□□□ -0.74
CIT2YCR005C IQG1Q12280 1495 aa10.43□□□□□ -0.74
CIT2YCR005C BUD3P25558 1636 aa10.42□□□□□ -0.74
CIT2YCR005C CKB1P43639 278 aa10.4□□□□□ -0.74
CIT2YCR005C ITT1Q04638 464 aa10.4□□□□□ -0.74
CIT2YCR005C DMA1P38823 416 aa10.39□□□□□ -0.75
CIT2YCR005C MRM1P25270 412 aa10.37□□□□□ -0.75
CIT2YCR005C ARO1P08566 1588 aaKnown RBP10.37□□□□□ -0.75
CIT2YCR005C BNI1P41832 1953 aa10.36□□□□□ -0.75
CIT2YCR005C TRM3Q07527 1436 aa10.35□□□□□ -0.75
CIT2YCR005C TGL3P40308 642 aa10.34□□□□□ -0.75
CIT2YCR005C SRB8P25648 1427 aa10.34□□□□□ -0.75
CIT2YCR005C MMS1Q06211 1407 aa10.33□□□□□ -0.76
CIT2YCR005C DOP1Q03921 1698 aa10.33□□□□□ -0.76
CIT2YCR005C RTG3P38165 486 aa10.32□□□□□ -0.76
CIT2YCR005C YSP2Q06681 1438 aa10.27□□□□□ -0.77
CIT2YCR005C BNR1P40450 1375 aa10.27□□□□□ -0.77
CIT2YCR005C SSM4P40318 1319 aa10.26□□□□□ -0.77
CIT2YCR005C BUD21Q08492 214 aaPredicted RBP10.26□□□□□ -0.77
CIT2YCR005C CHC1P22137 1653 aaKnown RBP10.23□□□□□ -0.77
CIT2YCR005C SEC7P11075 2009 aaKnown RBP10.21□□□□□ -0.77
CIT2YCR005C NSR1P27476 414 aaKnown RBP RIP-Chip data10.21□□□□□ -0.78not detected
CIT2YCR005C DNF2Q12675 1612 aa10.17□□□□□ -0.78
CIT2YCR005C ABP1P15891 592 aaKnown RBP10.16□□□□□ -0.78
CIT2YCR005C YAP5P40574 245 aa10.15□□□□□ -0.78
CIT2YCR005C YMR1P47147 688 aaKnown RBP RIP-Chip data10.14□□□□□ -0.79not detected
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms