RNA–Protein interactions for RNA: YCL069W

VBA3, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA3YCL069W TY1B-MR1Q04214 1755 aa12.96□□□□□ -0.33
VBA3YCL069W TY1B-MR2Q04670 1755 aaKnown RBP12.96□□□□□ -0.33
VBA3YCL069W TY1B-LR1Q12088 1755 aaKnown RBP12.96□□□□□ -0.33
VBA3YCL069W TY1B-NL1Q12112 1755 aa12.96□□□□□ -0.33
VBA3YCL069W TY1B-GR1Q12141 1755 aa12.96□□□□□ -0.33
VBA3YCL069W TY1B-BLQ12490 1755 aa12.96□□□□□ -0.33
VBA3YCL069W TSC11P40061 1430 aa12.96□□□□□ -0.33
VBA3YCL069W VTH1P40438 1549 aa12.94□□□□□ -0.34
VBA3YCL069W VTH2P40890 1549 aa12.94□□□□□ -0.34
VBA3YCL069W MET5P47169 1442 aa12.93□□□□□ -0.34
VBA3YCL069W REB1P21538 810 aa12.93□□□□□ -0.34
VBA3YCL069W MRPL32P25348 183 aa12.92□□□□□ -0.34
VBA3YCL069W SAS10Q12136 610 aaPredicted RBP12.9□□□□□ -0.34
VBA3YCL069W NTE1Q04958 1679 aa12.84□□□□□ -0.35
VBA3YCL069W SNQ2P32568 1501 aaKnown RBP12.84□□□□□ -0.35
VBA3YCL069W NUP159P40477 1460 aa12.83□□□□□ -0.36
VBA3YCL069W STH1P32597 1359 aa12.82□□□□□ -0.36
VBA3YCL069W RPO21P04050 1733 aaKnown RBP12.82□□□□□ -0.36
VBA3YCL069W YRF1-1P0CX20 1796 aa12.82□□□□□ -0.36
VBA3YCL069W YRF1-5P0CX21 1796 aa12.82□□□□□ -0.36
VBA3YCL069W YRF1-8P0CX22 1796 aa12.82□□□□□ -0.36
VBA3YCL069W MLP2P40457 1679 aa12.78□□□□□ -0.36
VBA3YCL069W SNT2P53127 1403 aa12.76□□□□□ -0.37
VBA3YCL069W ULS1Q08562 1619 aa12.72□□□□□ -0.37
VBA3YCL069W LTE1P07866 1435 aa12.71□□□□□ -0.37
VBA3YCL069W PDR15Q04182 1529 aaKnown RBP12.71□□□□□ -0.38
VBA3YCL069W RTT106P40161 455 aa12.7□□□□□ -0.38
VBA3YCL069W TAF7Q05021 590 aa12.69□□□□□ -0.38
VBA3YCL069W VPS15P22219 1454 aa12.67□□□□□ -0.38
VBA3YCL069W IFH1P39520 1085 aa12.67□□□□□ -0.38
VBA3YCL069W MET10P39692 1035 aa12.64□□□□□ -0.39
VBA3YCL069W GEA2P39993 1459 aaKnown RBP12.62□□□□□ -0.39
VBA3YCL069W SPO14P36126 1683 aa12.59□□□□□ -0.39
VBA3YCL069W BNI1P41832 1953 aa12.57□□□□□ -0.4
VBA3YCL069W ITT1Q04638 464 aa12.56□□□□□ -0.4
VBA3YCL069W IRC20Q06554 1556 aa12.54□□□□□ -0.4
VBA3YCL069W GEA1P47102 1408 aaPredicted RBP12.54□□□□□ -0.4
VBA3YCL069W PDR12Q02785 1511 aa12.54□□□□□ -0.4
VBA3YCL069W DRS2P39524 1355 aa12.49□□□□□ -0.41
VBA3YCL069W NUP157P40064 1391 aaKnown RBP12.49□□□□□ -0.41
VBA3YCL069W GDB1Q06625 1536 aa12.48□□□□□ -0.41
VBA3YCL069W NUP170P38181 1502 aa12.46□□□□□ -0.42
VBA3YCL069W TY3B-GQ99315 1547 aa12.46□□□□□ -0.42
VBA3YCL069W PDR10P51533 1564 aa12.43□□□□□ -0.42
VBA3YCL069W YBT1P32386 1661 aa12.42□□□□□ -0.42
VBA3YCL069W CAT8P39113 1433 aa12.4□□□□□ -0.42
VBA3YCL069W SPT21P35209 758 aa12.4□□□□□ -0.42
VBA3YCL069W IQG1Q12280 1495 aa12.39□□□□□ -0.43
VBA3YCL069W MMS1Q06211 1407 aa12.39□□□□□ -0.43
VBA3YCL069W YGL015CP33199 130 aa12.38□□□□□ -0.43
VBA3YCL069W CKB1P43639 278 aa12.35□□□□□ -0.43
VBA3YCL069W BUD3P25558 1636 aa12.33□□□□□ -0.44
VBA3YCL069W ARO1P08566 1588 aaKnown RBP12.31□□□□□ -0.44
VBA3YCL069W DOP1Q03921 1698 aa12.3□□□□□ -0.44
VBA3YCL069W SEC7P11075 2009 aaKnown RBP12.27□□□□□ -0.44
VBA3YCL069W YSP2Q06681 1438 aa12.25□□□□□ -0.45
VBA3YCL069W TRM3Q07527 1436 aa12.25□□□□□ -0.45
VBA3YCL069W IKI3Q06706 1349 aaKnown RBP12.24□□□□□ -0.45
VBA3YCL069W YKR023WP36119 530 aaKnown RBP12.24□□□□□ -0.45
VBA3YCL069W CDC27P38042 758 aa12.24□□□□□ -0.45
VBA3YCL069W ABP1P15891 592 aaKnown RBP12.22□□□□□ -0.45
VBA3YCL069W DNF2Q12675 1612 aa12.2□□□□□ -0.46
VBA3YCL069W SRB8P25648 1427 aa12.19□□□□□ -0.46
VBA3YCL069W CHC1P22137 1653 aaKnown RBP12.18□□□□□ -0.46
VBA3YCL069W BNR1P40450 1375 aa12.18□□□□□ -0.46
VBA3YCL069W SSM4P40318 1319 aa12.15□□□□□ -0.46
VBA3YCL069W BUD21Q08492 214 aaPredicted RBP12.1□□□□□ -0.47
VBA3YCL069W MIF2P35201 549 aa12.05□□□□□ -0.48
VBA3YCL069W YOR093CQ12275 1648 aa12.02□□□□□ -0.49
VBA3YCL069W TFC8Q12308 588 aa12.01□□□□□ -0.49
VBA3YCL069W RIM101P33400 625 aa12□□□□□ -0.49
VBA3YCL069W HOP09932 586 aa11.99□□□□□ -0.49
VBA3YCL069W YAP3P38749 330 aa11.95□□□□□ -0.5
VBA3YCL069W UBP10P53874 792 aaPredicted RBP11.93□□□□□ -0.5
VBA3YCL069W DCD1P06773 312 aa11.92□□□□□ -0.5
VBA3YCL069W URN1Q06525 465 aaKnown RBP11.91□□□□□ -0.5
VBA3YCL069W NUP188P52593 1655 aaKnown RBP11.89□□□□□ -0.51
VBA3YCL069W DNF3Q12674 1656 aa11.89□□□□□ -0.51
VBA3YCL069W GCN2P15442 1659 aa11.88□□□□□ -0.51
VBA3YCL069W VMR1P38735 1592 aa11.87□□□□□ -0.51
VBA3YCL069W MAP2P38174 421 aaKnown RBP11.86□□□□□ -0.51
VBA3YCL069W TYS1P36421 394 aaKnown RBP11.85□□□□□ -0.51
VBA3YCL069W IPL1P38991 367 aa11.85□□□□□ -0.51
VBA3YCL069W PDR5P33302 1511 aaKnown RBP11.8□□□□□ -0.52
VBA3YCL069W IML1P47170 1584 aa11.79□□□□□ -0.52
VBA3YCL069W MAK10Q02197 733 aa11.78□□□□□ -0.52
VBA3YCL069W PDR11P40550 1411 aa11.77□□□□□ -0.52
VBA3YCL069W TFA1P36100 482 aa11.72□□□□□ -0.53
VBA3YCL069W YFR006WP43590 535 aa11.72□□□□□ -0.53
VBA3YCL069W PAF1P38351 445 aa11.71□□□□□ -0.53
VBA3YCL069W USO1P25386 1790 aa11.68□□□□□ -0.54
VBA3YCL069W NOP7P53261 605 aaKnown RBP11.67□□□□□ -0.54
VBA3YCL069W SCY1P53009 804 aa11.66□□□□□ -0.54
VBA3YCL069W HAP1P0CE41 1502 aa11.65□□□□□ -0.54
VBA3YCL069W RAV1P47104 1357 aa11.64□□□□□ -0.55
VBA3YCL069W BCH2P36122 765 aa11.62□□□□□ -0.55
VBA3YCL069W RTC1Q08281 1341 aa11.6□□□□□ -0.55
VBA3YCL069W OXP1P28273 1286 aa11.58□□□□□ -0.56
VBA3YCL069W NUP192P47054 1683 aa11.55□□□□□ -0.56
VBA3YCL069W KRE5P22023 1365 aa11.53□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms