RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W TY1B-BRQ12193 1756 aa9.7□□□□□ -0.86
LDB16YCL005W TY1B-GR3Q12316 1755 aa9.7□□□□□ -0.86
LDB16YCL005W TY1B-ORQ92393 1755 aa9.7□□□□□ -0.86
LDB16YCL005W TY1B-HO13535 1793 aa9.69□□□□□ -0.86
LDB16YCL005W TY1B-DR5P0C2I2 1755 aa9.69□□□□□ -0.86
LDB16YCL005W TY1B-DR6P0C2I3 1755 aa9.69□□□□□ -0.86
LDB16YCL005W TY1B-LR2P0C2I5 1755 aa9.69□□□□□ -0.86
LDB16YCL005W TY1B-LR3P0C2I6 1755 aaKnown RBP9.69□□□□□ -0.86
LDB16YCL005W TY1B-PR1P0C2I9 1755 aaKnown RBP9.69□□□□□ -0.86
LDB16YCL005W TY1B-PR2P0C2J0 1756 aa9.69□□□□□ -0.86
LDB16YCL005W TY1B-PR3P0C2J1 1755 aaKnown RBP9.69□□□□□ -0.86
LDB16YCL005W TY1B-JR1P47098 1755 aa9.69□□□□□ -0.86
LDB16YCL005W TY1B-ML2Q03434 1755 aaKnown RBP9.69□□□□□ -0.86
LDB16YCL005W TY1B-ER1Q03612 1755 aa9.69□□□□□ -0.86
LDB16YCL005W TY1B-ML1Q04711 1755 aaKnown RBP9.69□□□□□ -0.86
LDB16YCL005W TY1B-GR2Q12269 1755 aa9.69□□□□□ -0.86
LDB16YCL005W TY1B-OLQ12273 1755 aa9.69□□□□□ -0.86
LDB16YCL005W TY1B-PLQ12414 1755 aaKnown RBP9.69□□□□□ -0.86
LDB16YCL005W EPS1P40557 701 aa9.68□□□□□ -0.86
LDB16YCL005W RSM7P47150 247 aa9.68□□□□□ -0.86
LDB16YCL005W YLR271WQ06152 274 aa9.67□□□□□ -0.86
LDB16YCL005W CDC25P04821 1589 aa9.67□□□□□ -0.86
LDB16YCL005W SAS10Q12136 610 aaPredicted RBP9.66□□□□□ -0.86
LDB16YCL005W BDF1P35817 686 aa9.64□□□□□ -0.87
LDB16YCL005W SPP41P38904 1435 aa9.63□□□□□ -0.87
LDB16YCL005W PAN1P32521 1480 aa9.61□□□□□ -0.87
LDB16YCL005W TAF7Q05021 590 aa9.6□□□□□ -0.87
LDB16YCL005W ESC1Q03661 1658 aaKnown RBP9.59□□□□□ -0.87
LDB16YCL005W SNQ2P32568 1501 aaKnown RBP9.59□□□□□ -0.87
LDB16YCL005W STH1P32597 1359 aa9.58□□□□□ -0.88
LDB16YCL005W MLP2P40457 1679 aa9.57□□□□□ -0.88
LDB16YCL005W TSC11P40061 1430 aa9.56□□□□□ -0.88
LDB16YCL005W VTH1P40438 1549 aa9.55□□□□□ -0.88
LDB16YCL005W VTH2P40890 1549 aa9.55□□□□□ -0.88
LDB16YCL005W MGA2P40578 1113 aa9.53□□□□□ -0.88
LDB16YCL005W TY1B-JR2P47100 1755 aaKnown RBP9.52□□□□□ -0.88
LDB16YCL005W TY1B-ER2Q03619 1755 aa9.52□□□□□ -0.88
LDB16YCL005W TY1B-MR1Q04214 1755 aa9.52□□□□□ -0.88
LDB16YCL005W TY1B-MR2Q04670 1755 aaKnown RBP9.52□□□□□ -0.88
LDB16YCL005W TY1B-LR1Q12088 1755 aaKnown RBP9.52□□□□□ -0.88
LDB16YCL005W TY1B-NL1Q12112 1755 aa9.52□□□□□ -0.88
LDB16YCL005W TY1B-GR1Q12141 1755 aa9.52□□□□□ -0.88
LDB16YCL005W TY1B-BLQ12490 1755 aa9.52□□□□□ -0.88
LDB16YCL005W TRM732Q03496 1420 aa9.51□□□□□ -0.89
LDB16YCL005W DMA1P38823 416 aa9.51□□□□□ -0.89
LDB16YCL005W RPA190P10964 1664 aaKnown RBP9.51□□□□□ -0.89
LDB16YCL005W DNF1P32660 1571 aa9.5□□□□□ -0.89
LDB16YCL005W PDR15Q04182 1529 aaKnown RBP9.49□□□□□ -0.89
LDB16YCL005W AI2P03876 854 aa9.48□□□□□ -0.89
LDB16YCL005W BBC1P47068 1157 aa9.48□□□□□ -0.89
LDB16YCL005W ULS1Q08562 1619 aa9.46□□□□□ -0.89
LDB16YCL005W MST1P07236 462 aa9.46□□□□□ -0.9
LDB16YCL005W YOR238WQ08634 303 aa9.45□□□□□ -0.9
LDB16YCL005W NTE1Q04958 1679 aa9.45□□□□□ -0.9
LDB16YCL005W IFH1P39520 1085 aa9.44□□□□□ -0.9
LDB16YCL005W SNT2P53127 1403 aa9.44□□□□□ -0.9
LDB16YCL005W RPO21P04050 1733 aaKnown RBP9.43□□□□□ -0.9
LDB16YCL005W PSD2P53037 1138 aaKnown RBP9.41□□□□□ -0.9
LDB16YCL005W GEA1P47102 1408 aaPredicted RBP9.4□□□□□ -0.9
LDB16YCL005W NSR1P27476 414 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
LDB16YCL005W RTT106P40161 455 aa9.39□□□□□ -0.91
LDB16YCL005W NUP159P40477 1460 aa9.38□□□□□ -0.91
LDB16YCL005W YBL029C-AQ3E756 94 aa9.37□□□□□ -0.91
LDB16YCL005W MET5P47169 1442 aa9.37□□□□□ -0.91
LDB16YCL005W GEA2P39993 1459 aaKnown RBP9.36□□□□□ -0.91
LDB16YCL005W CST9Q06032 482 aa9.35□□□□□ -0.91
LDB16YCL005W IKI3Q06706 1349 aaKnown RBP9.34□□□□□ -0.91
LDB16YCL005W YAP5P40574 245 aa9.33□□□□□ -0.92
LDB16YCL005W IRC20Q06554 1556 aa9.31□□□□□ -0.92
LDB16YCL005W YRF1-1P0CX20 1796 aa9.31□□□□□ -0.92
LDB16YCL005W YRF1-5P0CX21 1796 aa9.31□□□□□ -0.92
LDB16YCL005W YRF1-8P0CX22 1796 aa9.31□□□□□ -0.92
LDB16YCL005W VPS15P22219 1454 aa9.29□□□□□ -0.92
LDB16YCL005W TY3B-GQ99315 1547 aa9.29□□□□□ -0.92
LDB16YCL005W CAT8P39113 1433 aa9.28□□□□□ -0.92
LDB16YCL005W NUP170P38181 1502 aa9.27□□□□□ -0.93
LDB16YCL005W YBT1P32386 1661 aa9.27□□□□□ -0.93
LDB16YCL005W MET10P39692 1035 aa9.27□□□□□ -0.93
LDB16YCL005W VNX1P42839 908 aa9.26□□□□□ -0.93
LDB16YCL005W PDR12Q02785 1511 aa9.25□□□□□ -0.93
LDB16YCL005W SPO14P36126 1683 aa9.24□□□□□ -0.93
LDB16YCL005W GDB1Q06625 1536 aa9.21□□□□□ -0.93
LDB16YCL005W SSM4P40318 1319 aa9.2□□□□□ -0.94
LDB16YCL005W NUP157P40064 1391 aaKnown RBP9.2□□□□□ -0.94
LDB16YCL005W PDR10P51533 1564 aa9.2□□□□□ -0.94
LDB16YCL005W SPP1Q03012 353 aa9.19□□□□□ -0.94
LDB16YCL005W WSC3Q12215 556 aa9.19□□□□□ -0.94
LDB16YCL005W MRM1P25270 412 aa9.18□□□□□ -0.94
LDB16YCL005W LTE1P07866 1435 aa9.16□□□□□ -0.94
LDB16YCL005W ARO1P08566 1588 aaKnown RBP9.16□□□□□ -0.94
LDB16YCL005W GTT3P39996 337 aa9.15□□□□□ -0.94
LDB16YCL005W CKB1P43639 278 aa9.15□□□□□ -0.94
LDB16YCL005W SRB8P25648 1427 aa9.14□□□□□ -0.95
LDB16YCL005W RTG3P38165 486 aa9.12□□□□□ -0.95
LDB16YCL005W IQG1Q12280 1495 aa9.11□□□□□ -0.95
LDB16YCL005W BUD3P25558 1636 aa9.11□□□□□ -0.95
LDB16YCL005W TIF11P38912 153 aaKnown RBP9.08□□□□□ -0.96
LDB16YCL005W SEC7P11075 2009 aaKnown RBP9.07□□□□□ -0.96
LDB16YCL005W YSP2Q06681 1438 aa9.05□□□□□ -0.96
LDB16YCL005W DRS2P39524 1355 aa9.05□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms