RNA–Protein interactions for RNA: YBR183W

YPC1, Transcript of Alkaline ceramidase, yeastyeast

Gene YPC1, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPC1YBR183W NTE1Q04958 1679 aa11.1□□□□□ -0.63
YPC1YBR183W SNT2P53127 1403 aa11.09□□□□□ -0.63
YPC1YBR183W TRM732Q03496 1420 aa11.09□□□□□ -0.63
YPC1YBR183W RQC2Q12532 1038 aaKnown RBP11.07□□□□□ -0.64
YPC1YBR183W RPO21P04050 1733 aaKnown RBP11.06□□□□□ -0.64
YPC1YBR183W NUP170P38181 1502 aa11.04□□□□□ -0.64
YPC1YBR183W GEA1P47102 1408 aaPredicted RBP11.02□□□□□ -0.64
YPC1YBR183W TY3B-GQ99315 1547 aa10.99□□□□□ -0.65
YPC1YBR183W IRC20Q06554 1556 aa10.99□□□□□ -0.65
YPC1YBR183W IKI3Q06706 1349 aaKnown RBP10.98□□□□□ -0.65
YPC1YBR183W GEA2P39993 1459 aaKnown RBP10.97□□□□□ -0.65
YPC1YBR183W YBT1P32386 1661 aa10.95□□□□□ -0.66
YPC1YBR183W NUP159P40477 1460 aa10.93□□□□□ -0.66
YPC1YBR183W YRF1-1P0CX20 1796 aa10.9□□□□□ -0.66
YPC1YBR183W YRF1-5P0CX21 1796 aa10.9□□□□□ -0.66
YPC1YBR183W YRF1-8P0CX22 1796 aa10.9□□□□□ -0.66
YPC1YBR183W IFH1P39520 1085 aa10.89□□□□□ -0.67
YPC1YBR183W MET5P47169 1442 aa10.89□□□□□ -0.67
YPC1YBR183W PDR12Q02785 1511 aa10.87□□□□□ -0.67
YPC1YBR183W CAT8P39113 1433 aa10.86□□□□□ -0.67
YPC1YBR183W VPS15P22219 1454 aa10.85□□□□□ -0.67
YPC1YBR183W SPO14P36126 1683 aa10.82□□□□□ -0.68
YPC1YBR183W GDB1Q06625 1536 aa10.81□□□□□ -0.68
YPC1YBR183W SSM4P40318 1319 aa10.81□□□□□ -0.68
YPC1YBR183W RTT106P40161 455 aa10.8□□□□□ -0.68
YPC1YBR183W PDR10P51533 1564 aa10.79□□□□□ -0.68
YPC1YBR183W ARO1P08566 1588 aaKnown RBP10.76□□□□□ -0.69
YPC1YBR183W MET10P39692 1035 aa10.72□□□□□ -0.69
YPC1YBR183W SRB8P25648 1427 aa10.68□□□□□ -0.7
YPC1YBR183W NUP157P40064 1391 aaKnown RBP10.68□□□□□ -0.7
YPC1YBR183W BUD3P25558 1636 aa10.63□□□□□ -0.71
YPC1YBR183W IQG1Q12280 1495 aa10.62□□□□□ -0.71
YPC1YBR183W LTE1P07866 1435 aa10.61□□□□□ -0.71
YPC1YBR183W GCN2P15442 1659 aa10.61□□□□□ -0.71
YPC1YBR183W YSP2Q06681 1438 aa10.6□□□□□ -0.71
YPC1YBR183W MMS1Q06211 1407 aa10.57□□□□□ -0.72
YPC1YBR183W SEC7P11075 2009 aaKnown RBP10.55□□□□□ -0.72
YPC1YBR183W DOP1Q03921 1698 aa10.54□□□□□ -0.72
YPC1YBR183W CKB1P43639 278 aa10.54□□□□□ -0.72
YPC1YBR183W CHC1P22137 1653 aaKnown RBP10.52□□□□□ -0.73
YPC1YBR183W TRM3Q07527 1436 aa10.5□□□□□ -0.73
YPC1YBR183W YOR093CQ12275 1648 aa10.47□□□□□ -0.73
YPC1YBR183W BNI1P41832 1953 aa10.45□□□□□ -0.74
YPC1YBR183W PDR5P33302 1511 aaKnown RBP10.44□□□□□ -0.74
YPC1YBR183W DRS2P39524 1355 aa10.44□□□□□ -0.74
YPC1YBR183W BNR1P40450 1375 aa10.44□□□□□ -0.74
YPC1YBR183W BUD21Q08492 214 aaPredicted RBP10.44□□□□□ -0.74
YPC1YBR183W VMR1P38735 1592 aa10.36□□□□□ -0.75
YPC1YBR183W NUP188P52593 1655 aaKnown RBP10.36□□□□□ -0.75
YPC1YBR183W FAP1P53971 965 aa10.35□□□□□ -0.75
YPC1YBR183W DNF2Q12675 1612 aa10.33□□□□□ -0.76
YPC1YBR183W ITT1Q04638 464 aa10.3□□□□□ -0.76
YPC1YBR183W IML1P47170 1584 aa10.28□□□□□ -0.76
YPC1YBR183W NOP7P53261 605 aaKnown RBP10.26□□□□□ -0.77
YPC1YBR183W PDR11P40550 1411 aa10.25□□□□□ -0.77
YPC1YBR183W RAV1P47104 1357 aa10.25□□□□□ -0.77
YPC1YBR183W PAF1P38351 445 aa10.23□□□□□ -0.77
YPC1YBR183W POL5P39985 1022 aaKnown RBP10.22□□□□□ -0.77
YPC1YBR183W BFR2Q06631 534 aaKnown RBP10.22□□□□□ -0.77
YPC1YBR183W RTC1Q08281 1341 aa10.19□□□□□ -0.78
YPC1YBR183W NUP192P47054 1683 aa10.18□□□□□ -0.78
YPC1YBR183W TY3B-IQ7LHG5 1498 aaKnown RBP10.18□□□□□ -0.78
YPC1YBR183W HAP1P0CE41 1502 aa10.17□□□□□ -0.78
YPC1YBR183W URN1Q06525 465 aaKnown RBP10.12□□□□□ -0.79
YPC1YBR183W IPL1P38991 367 aa10.1□□□□□ -0.79
YPC1YBR183W DNF3Q12674 1656 aa10.09□□□□□ -0.79
YPC1YBR183W TYS1P36421 394 aaKnown RBP10.06□□□□□ -0.8
YPC1YBR183W MHP1P43638 1398 aa10.05□□□□□ -0.8
YPC1YBR183W YAP3P38749 330 aa10.05□□□□□ -0.8
YPC1YBR183W SEC3P33332 1336 aaKnown RBP10.05□□□□□ -0.8
YPC1YBR183W ESL2P36168 1195 aa10.03□□□□□ -0.8
YPC1YBR183W YLR419WQ06698 1435 aaKnown RBP10.03□□□□□ -0.8
YPC1YBR183W BCK1Q01389 1478 aa10.01□□□□□ -0.81
YPC1YBR183W TAF5P38129 798 aa10□□□□□ -0.81
YPC1YBR183W NSR1P27476 414 aaKnown RBP RIP-Chip data9.95□□□□□ -0.82not detected
YPC1YBR183W SPT7P35177 1332 aa9.95□□□□□ -0.82
YPC1YBR183W ALD4P46367 519 aaKnown RBP9.94□□□□□ -0.82
YPC1YBR183W ENP1P38333 483 aaKnown RBP9.93□□□□□ -0.82
YPC1YBR183W KIP3P53086 805 aaKnown RBP9.93□□□□□ -0.82
YPC1YBR183W RAD9P14737 1309 aa9.92□□□□□ -0.82
YPC1YBR183W ORC1P54784 914 aaPredicted RBP9.92□□□□□ -0.82
YPC1YBR183W SCT1P32784 759 aa9.91□□□□□ -0.82
YPC1YBR183W MLP1Q02455 1875 aaKnown RBP9.9□□□□□ -0.82
YPC1YBR183W SPE2P21182 396 aa9.89□□□□□ -0.83
YPC1YBR183W CFT1Q06632 1357 aaKnown RBP9.87□□□□□ -0.83
YPC1YBR183W TAF8Q03750 510 aa9.86□□□□□ -0.83
YPC1YBR183W PDS5Q04264 1277 aa9.86□□□□□ -0.83
YPC1YBR183W TY1B-NL2Q99337 1749 aaKnown RBP9.86□□□□□ -0.83
YPC1YBR183W PRI1P10363 409 aa9.84□□□□□ -0.83
YPC1YBR183W PSD2P53037 1138 aaKnown RBP9.84□□□□□ -0.83
YPC1YBR183W CAB1Q04430 367 aa9.84□□□□□ -0.83
YPC1YBR183W MAK10Q02197 733 aa9.83□□□□□ -0.84
YPC1YBR183W USO1P25386 1790 aa9.83□□□□□ -0.84
YPC1YBR183W NAP1P25293 417 aaKnown RBP9.82□□□□□ -0.84
YPC1YBR183W KRE5P22023 1365 aa9.82□□□□□ -0.84
YPC1YBR183W ABP1P15891 592 aaKnown RBP9.81□□□□□ -0.84
YPC1YBR183W MRX12P47084 519 aa9.79□□□□□ -0.84
YPC1YBR183W FKH1P40466 484 aa9.77□□□□□ -0.85
YPC1YBR183W YML133CQ03099 1374 aa9.76□□□□□ -0.85
YPC1YBR183W YLL067CQ07888 1374 aa9.76□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms