RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	TY1B-PL	Q12414	1755 aa	Known RBP	5.55	□□□□□ -1.52
PIM1	YBL022C	TFA1	P36100	482 aa		5.54	□□□□□ -1.52
PIM1	YBL022C	PDR15	Q04182	1529 aa	Known RBP	5.53	□□□□□ -1.52
PIM1	YBL022C	CFT1	Q06632	1357 aa	Known RBP	5.53	□□□□□ -1.52
PIM1	YBL022C	SWR1	Q05471	1514 aa		5.5	□□□□□ -1.53
PIM1	YBL022C	NUP159	P40477	1460 aa		5.5	□□□□□ -1.53
PIM1	YBL022C	TCB2	P48231	1178 aa		5.5	□□□□□ -1.53
PIM1	YBL022C	SEC3	P33332	1336 aa	Known RBP	5.5	□□□□□ -1.53
PIM1	YBL022C	TY1B-BR	Q12193	1756 aa		5.49	□□□□□ -1.53
PIM1	YBL022C	TY1B-GR3	Q12316	1755 aa		5.49	□□□□□ -1.53
PIM1	YBL022C	TY1B-OR	Q92393	1755 aa		5.49	□□□□□ -1.53
PIM1	YBL022C	SMC4	Q12267	1418 aa		5.49	□□□□□ -1.53
PIM1	YBL022C	RPO31	P04051	1460 aa		5.48	□□□□□ -1.53
PIM1	YBL022C	DNF1	P32660	1571 aa		5.48	□□□□□ -1.53
PIM1	YBL022C	TAF2	P23255	1407 aa		5.47	□□□□□ -1.53
PIM1	YBL022C	ARO1	P08566	1588 aa	Known RBP	5.46	□□□□□ -1.53
PIM1	YBL022C	TY1B-JR2	P47100	1755 aa	Known RBP	5.46	□□□□□ -1.53
PIM1	YBL022C	TY1B-ER2	Q03619	1755 aa		5.46	□□□□□ -1.53
PIM1	YBL022C	TY1B-MR1	Q04214	1755 aa		5.46	□□□□□ -1.53
PIM1	YBL022C	TY1B-MR2	Q04670	1755 aa	Known RBP	5.46	□□□□□ -1.53
PIM1	YBL022C	TY1B-LR1	Q12088	1755 aa	Known RBP	5.46	□□□□□ -1.53
PIM1	YBL022C	TY1B-NL1	Q12112	1755 aa		5.46	□□□□□ -1.53
PIM1	YBL022C	TY1B-GR1	Q12141	1755 aa		5.46	□□□□□ -1.53
PIM1	YBL022C	TY1B-BL	Q12490	1755 aa		5.46	□□□□□ -1.53
PIM1	YBL022C	GDB1	Q06625	1536 aa		5.46	□□□□□ -1.54
PIM1	YBL022C	TSC11	P40061	1430 aa		5.46	□□□□□ -1.54
PIM1	YBL022C	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.43	□□□□□ -1.54
PIM1	YBL022C	TAF7	Q05021	590 aa		5.43	□□□□□ -1.54
PIM1	YBL022C	PDR12	Q02785	1511 aa		5.43	□□□□□ -1.54
PIM1	YBL022C	GEA1	P47102	1408 aa	Predicted RBP	5.42	□□□□□ -1.54
PIM1	YBL022C	MMS1	Q06211	1407 aa		5.42	□□□□□ -1.54
PIM1	YBL022C	DNF2	Q12675	1612 aa		5.42	□□□□□ -1.54
PIM1	YBL022C	POL5	P39985	1022 aa	Known RBP	5.41	□□□□□ -1.54
PIM1	YBL022C	SNF2	P22082	1703 aa		5.41	□□□□□ -1.54
PIM1	YBL022C	VPS15	P22219	1454 aa		5.4	□□□□□ -1.54
PIM1	YBL022C	YIR014W	P40570	242 aa		5.4	□□□□□ -1.55
PIM1	YBL022C	CLC1	P17891	233 aa		5.39	□□□□□ -1.55
PIM1	YBL022C	DOP1	Q03921	1698 aa		5.39	□□□□□ -1.55
PIM1	YBL022C	SPO14	P36126	1683 aa		5.38	□□□□□ -1.55
PIM1	YBL022C	PAN1	P32521	1480 aa		5.38	□□□□□ -1.55
PIM1	YBL022C	RPO21	P04050	1733 aa	Known RBP	5.37	□□□□□ -1.55
PIM1	YBL022C	SNT2	P53127	1403 aa		5.36	□□□□□ -1.55
PIM1	YBL022C	AVT3	P36062	692 aa		5.36	□□□□□ -1.55
PIM1	YBL022C	GEA2	P39993	1459 aa	Known RBP	5.35	□□□□□ -1.55
PIM1	YBL022C	YOR093C	Q12275	1648 aa		5.33	□□□□□ -1.56
PIM1	YBL022C	SNF7	P39929	240 aa	Known RBP	5.32	□□□□□ -1.56
PIM1	YBL022C	EDE1	P34216	1381 aa		5.32	□□□□□ -1.56
PIM1	YBL022C	NUP157	P40064	1391 aa	Known RBP	5.32	□□□□□ -1.56
PIM1	YBL022C	HAP1	P0CE41	1502 aa		5.31	□□□□□ -1.56
PIM1	YBL022C	NUP192	P47054	1683 aa		5.3	□□□□□ -1.56
PIM1	YBL022C	IQG1	Q12280	1495 aa		5.3	□□□□□ -1.56
PIM1	YBL022C	MHP1	P43638	1398 aa		5.3	□□□□□ -1.56
PIM1	YBL022C	ABP1	P15891	592 aa	Known RBP	5.29	□□□□□ -1.56
PIM1	YBL022C	YFR016C	P43597	1233 aa	Known RBP	5.29	□□□□□ -1.56
PIM1	YBL022C	RLF2	Q12495	606 aa		5.29	□□□□□ -1.56
PIM1	YBL022C	YGR130C	P53278	816 aa		5.28	□□□□□ -1.56
PIM1	YBL022C	VTH1	P40438	1549 aa		5.27	□□□□□ -1.57
PIM1	YBL022C	VTH2	P40890	1549 aa		5.27	□□□□□ -1.57
PIM1	YBL022C	PSD2	P53037	1138 aa	Known RBP	5.27	□□□□□ -1.57
PIM1	YBL022C	NOP53	Q12080	455 aa	Known RBP	5.27	□□□□□ -1.57
PIM1	YBL022C	DNF3	Q12674	1656 aa		5.26	□□□□□ -1.57
PIM1	YBL022C	IML1	P47170	1584 aa		5.26	□□□□□ -1.57
PIM1	YBL022C	CHC1	P22137	1653 aa	Known RBP	5.26	□□□□□ -1.57
PIM1	YBL022C	NTE1	Q04958	1679 aa		5.26	□□□□□ -1.57
PIM1	YBL022C	TRM3	Q07527	1436 aa		5.25	□□□□□ -1.57
PIM1	YBL022C	ROX1	P25042	368 aa		5.25	□□□□□ -1.57
PIM1	YBL022C	RTT106	P40161	455 aa		5.25	□□□□□ -1.57
PIM1	YBL022C	SLN1	P39928	1220 aa	Predicted RBP	5.24	□□□□□ -1.57
PIM1	YBL022C	DUR1,2	P32528	1835 aa	Known RBP	5.23	□□□□□ -1.57
PIM1	YBL022C	NST1	P53935	1240 aa		5.23	□□□□□ -1.57
PIM1	YBL022C	RPC31	P17890	251 aa		5.23	□□□□□ -1.57
PIM1	YBL022C	SPT21	P35209	758 aa		5.22	□□□□□ -1.57
PIM1	YBL022C	SAS10	Q12136	610 aa	Predicted RBP	5.22	□□□□□ -1.57
PIM1	YBL022C	KNS1	P32350	737 aa	Predicted RBP	5.21	□□□□□ -1.58
PIM1	YBL022C	CDC25	P04821	1589 aa		5.21	□□□□□ -1.58
PIM1	YBL022C	MET5	P47169	1442 aa		5.21	□□□□□ -1.58
PIM1	YBL022C	IOC4	Q04213	475 aa		5.2	□□□□□ -1.58
PIM1	YBL022C	CAT8	P39113	1433 aa		5.2	□□□□□ -1.58
PIM1	YBL022C	NOT3	P06102	836 aa	Known RBP	5.19	□□□□□ -1.58
PIM1	YBL022C	RPA190	P10964	1664 aa	Known RBP	5.18	□□□□□ -1.58
PIM1	YBL022C	RPS0B	P46654	252 aa	Known RBP	5.17	□□□□□ -1.58
PIM1	YBL022C	CTR9	P89105	1077 aa		5.17	□□□□□ -1.58
PIM1	YBL022C	MDS3	P53094	1487 aa		5.17	□□□□□ -1.58
PIM1	YBL022C	VMR1	P38735	1592 aa		5.17	□□□□□ -1.58
PIM1	YBL022C	MLP1	Q02455	1875 aa	Known RBP	5.17	□□□□□ -1.58
PIM1	YBL022C	CWC22	P53333	577 aa	Known RBP	5.17	□□□□□ -1.58
PIM1	YBL022C	RRP5	Q05022	1729 aa	Known RBP	5.17	□□□□□ -1.58
PIM1	YBL022C	NUG1	P40010	520 aa	Known RBP	5.16	□□□□□ -1.58
PIM1	YBL022C	PAF1	P38351	445 aa		5.16	□□□□□ -1.58
PIM1	YBL022C	PCT1	P13259	424 aa		5.15	□□□□□ -1.58
PIM1	YBL022C	USO1	P25386	1790 aa		5.15	□□□□□ -1.59
PIM1	YBL022C	ENV11	P53246	860 aa		5.14	□□□□□ -1.59
PIM1	YBL022C	RPP0	P05317	312 aa	Known RBP	5.12	□□□□□ -1.59
PIM1	YBL022C	LEO1	P38439	464 aa		5.12	□□□□□ -1.59
PIM1	YBL022C	FPR3	P38911	411 aa	Known RBP	5.12	□□□□□ -1.59
PIM1	YBL022C	FUN12	P39730	1002 aa	Known RBP	5.11	□□□□□ -1.59
PIM1	YBL022C	RVB2	Q12464	471 aa	Known RBP	5.11	□□□□□ -1.59
PIM1	YBL022C	MSP1	P28737	362 aa		5.11	□□□□□ -1.59
PIM1	YBL022C	KIP3	P53086	805 aa	Known RBP	5.11	□□□□□ -1.59
PIM1	YBL022C	LTE1	P07866	1435 aa		5.11	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms