RNA–Protein interactions for RNA: YAL058W

CNE1, Transcript of Calnexin, yeastyeast

Gene CNE1, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNE1YAL058W VTH1P40438 1549 aa9.12□□□□□ -0.95
CNE1YAL058W VTH2P40890 1549 aa9.12□□□□□ -0.95
CNE1YAL058W NTE1Q04958 1679 aa9.11□□□□□ -0.95
CNE1YAL058W MYO4P32492 1471 aa9.11□□□□□ -0.95
CNE1YAL058W TSC11P40061 1430 aa9.1□□□□□ -0.95
CNE1YAL058W YTA7P40340 1379 aa9.09□□□□□ -0.95
CNE1YAL058W TY1B-JR2P47100 1755 aaKnown RBP9.09□□□□□ -0.95
CNE1YAL058W TY1B-ER2Q03619 1755 aa9.09□□□□□ -0.95
CNE1YAL058W TY1B-MR1Q04214 1755 aa9.09□□□□□ -0.95
CNE1YAL058W TY1B-MR2Q04670 1755 aaKnown RBP9.09□□□□□ -0.95
CNE1YAL058W TY1B-LR1Q12088 1755 aaKnown RBP9.09□□□□□ -0.95
CNE1YAL058W TY1B-NL1Q12112 1755 aa9.09□□□□□ -0.95
CNE1YAL058W TY1B-GR1Q12141 1755 aa9.09□□□□□ -0.95
CNE1YAL058W TY1B-BLQ12490 1755 aa9.09□□□□□ -0.95
CNE1YAL058W GEA2P39993 1459 aaKnown RBP9.08□□□□□ -0.96
CNE1YAL058W NUP159P40477 1460 aa9.08□□□□□ -0.96
CNE1YAL058W RPO21P04050 1733 aaKnown RBP9.05□□□□□ -0.96
CNE1YAL058W VPS15P22219 1454 aa9.03□□□□□ -0.96
CNE1YAL058W YRF1-1P0CX20 1796 aa9.02□□□□□ -0.97
CNE1YAL058W YRF1-5P0CX21 1796 aa9.02□□□□□ -0.97
CNE1YAL058W YRF1-8P0CX22 1796 aa9.02□□□□□ -0.97
CNE1YAL058W SNQ2P32568 1501 aaKnown RBP8.99□□□□□ -0.97
CNE1YAL058W BNI1P41832 1953 aa8.97□□□□□ -0.97
CNE1YAL058W STH1P32597 1359 aa8.95□□□□□ -0.98
CNE1YAL058W DRS2P39524 1355 aa8.94□□□□□ -0.98
CNE1YAL058W SNT2P53127 1403 aa8.92□□□□□ -0.98
CNE1YAL058W MLP2P40457 1679 aa8.91□□□□□ -0.98
CNE1YAL058W ITT1Q04638 464 aa8.9□□□□□ -0.99
CNE1YAL058W ULS1Q08562 1619 aa8.88□□□□□ -0.99
CNE1YAL058W MMS1Q06211 1407 aa8.87□□□□□ -0.99
CNE1YAL058W NUP170P38181 1502 aa8.87□□□□□ -0.99
CNE1YAL058W SPO14P36126 1683 aa8.87□□□□□ -0.99
CNE1YAL058W RTT106P40161 455 aa8.86□□□□□ -0.99
CNE1YAL058W PDR15Q04182 1529 aaKnown RBP8.86□□□□□ -0.99
CNE1YAL058W PDR12Q02785 1511 aa8.85□□□□□ -0.99
CNE1YAL058W MET10P39692 1035 aa8.84□□□□□ -0.99
CNE1YAL058W SAS10Q12136 610 aaPredicted RBP8.82□□□□□ -1
CNE1YAL058W GDB1Q06625 1536 aa8.81□□□□□ -1
CNE1YAL058W MIF2P35201 549 aa8.8□□□□□ -1
CNE1YAL058W IRC20Q06554 1556 aa8.79□□□□□ -1
CNE1YAL058W TAF7Q05021 590 aa8.79□□□□□ -1
CNE1YAL058W IQG1Q12280 1495 aa8.77□□□□□ -1.01
CNE1YAL058W DNF2Q12675 1612 aa8.76□□□□□ -1.01
CNE1YAL058W NUP157P40064 1391 aaKnown RBP8.76□□□□□ -1.01
CNE1YAL058W TRM3Q07527 1436 aa8.76□□□□□ -1.01
CNE1YAL058W DOP1Q03921 1698 aa8.76□□□□□ -1.01
CNE1YAL058W ABP1P15891 592 aaKnown RBP8.75□□□□□ -1.01
CNE1YAL058W SPT21P35209 758 aa8.75□□□□□ -1.01
CNE1YAL058W BUD3P25558 1636 aa8.74□□□□□ -1.01
CNE1YAL058W YGL015CP33199 130 aa8.74□□□□□ -1.01
CNE1YAL058W PDR10P51533 1564 aa8.73□□□□□ -1.01
CNE1YAL058W IFH1P39520 1085 aa8.7□□□□□ -1.02
CNE1YAL058W GEA1P47102 1408 aaPredicted RBP8.68□□□□□ -1.02
CNE1YAL058W TFA1P36100 482 aa8.68□□□□□ -1.02
CNE1YAL058W CAT8P39113 1433 aa8.68□□□□□ -1.02
CNE1YAL058W CHC1P22137 1653 aaKnown RBP8.66□□□□□ -1.02
CNE1YAL058W YBT1P32386 1661 aa8.66□□□□□ -1.02
CNE1YAL058W TY3B-GQ99315 1547 aa8.64□□□□□ -1.03
CNE1YAL058W YKR023WP36119 530 aaKnown RBP8.64□□□□□ -1.03
CNE1YAL058W CDC27P38042 758 aa8.64□□□□□ -1.03
CNE1YAL058W IKI3Q06706 1349 aaKnown RBP8.62□□□□□ -1.03
CNE1YAL058W ARO1P08566 1588 aaKnown RBP8.62□□□□□ -1.03
CNE1YAL058W YOR093CQ12275 1648 aa8.55□□□□□ -1.04
CNE1YAL058W SSM4P40318 1319 aa8.55□□□□□ -1.04
CNE1YAL058W SEC7P11075 2009 aaKnown RBP8.54□□□□□ -1.04
CNE1YAL058W CKB1P43639 278 aa8.54□□□□□ -1.04
CNE1YAL058W YSP2Q06681 1438 aa8.52□□□□□ -1.05
CNE1YAL058W BNR1P40450 1375 aa8.51□□□□□ -1.05
CNE1YAL058W YFR006WP43590 535 aa8.5□□□□□ -1.05
CNE1YAL058W DNF3Q12674 1656 aa8.49□□□□□ -1.05
CNE1YAL058W SRB8P25648 1427 aa8.48□□□□□ -1.05
CNE1YAL058W HOP09932 586 aa8.47□□□□□ -1.05
CNE1YAL058W TFC8Q12308 588 aa8.47□□□□□ -1.05
CNE1YAL058W RIM101P33400 625 aa8.46□□□□□ -1.05
CNE1YAL058W NSR1P27476 414 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
CNE1YAL058W DCD1P06773 312 aa8.42□□□□□ -1.06
CNE1YAL058W UBP10P53874 792 aaPredicted RBP8.42□□□□□ -1.06
CNE1YAL058W YAP3P38749 330 aa8.4□□□□□ -1.06
CNE1YAL058W MAP2P38174 421 aaKnown RBP8.38□□□□□ -1.07
CNE1YAL058W URN1Q06525 465 aaKnown RBP8.38□□□□□ -1.07
CNE1YAL058W BUD21Q08492 214 aaPredicted RBP8.36□□□□□ -1.07
CNE1YAL058W NOP2P40991 618 aaKnown RBP8.34□□□□□ -1.07
CNE1YAL058W NUP188P52593 1655 aaKnown RBP8.34□□□□□ -1.07
CNE1YAL058W VMR1P38735 1592 aa8.3□□□□□ -1.08
CNE1YAL058W IML1P47170 1584 aa8.3□□□□□ -1.08
CNE1YAL058W HAP1P0CE41 1502 aa8.3□□□□□ -1.08
CNE1YAL058W MAK10Q02197 733 aa8.29□□□□□ -1.08
CNE1YAL058W GCN2P15442 1659 aa8.28□□□□□ -1.08
CNE1YAL058W POL5P39985 1022 aaKnown RBP8.27□□□□□ -1.09
CNE1YAL058W IPL1P38991 367 aa8.25□□□□□ -1.09
CNE1YAL058W USO1P25386 1790 aa8.25□□□□□ -1.09
CNE1YAL058W PDR5P33302 1511 aaKnown RBP8.23□□□□□ -1.09
CNE1YAL058W SCY1P53009 804 aa8.23□□□□□ -1.09
CNE1YAL058W TY1B-NL2Q99337 1749 aaKnown RBP8.21□□□□□ -1.1
CNE1YAL058W BCH2P36122 765 aa8.19□□□□□ -1.1
CNE1YAL058W TYS1P36421 394 aaKnown RBP8.19□□□□□ -1.1
CNE1YAL058W ENP1P38333 483 aaKnown RBP8.19□□□□□ -1.1
CNE1YAL058W SPT7P35177 1332 aa8.18□□□□□ -1.1
CNE1YAL058W OXP1P28273 1286 aa8.17□□□□□ -1.1
CNE1YAL058W YMR196WQ04336 1088 aa8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms