RNA–Protein interactions for RNA: YAL016W

TPD3, Transcript of Regulatory subunit A of the heterotrimeric PP2A complex, yeastyeast

Gene TPD3, Length 1,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPD3YAL016W YDR090CQ03193 310 aa6.01□□□□□ -1.45
TPD3YAL016W BRL1P38770 471 aa5.99□□□□□ -1.45
TPD3YAL016W YOR238WQ08634 303 aa5.99□□□□□ -1.45
TPD3YAL016W UBP14P38237 781 aaKnown RBP5.98□□□□□ -1.45
TPD3YAL016W SUB2Q07478 446 aaKnown RBP5.98□□□□□ -1.45
TPD3YAL016W SSA1P10591 642 aaKnown RBP5.97□□□□□ -1.45
TPD3YAL016W GEF1P37020 779 aa5.96□□□□□ -1.46
TPD3YAL016W BIM1P40013 344 aa5.96□□□□□ -1.46
TPD3YAL016W YLR326WQ06170 240 aaKnown RBP5.96□□□□□ -1.46
TPD3YAL016W GLN1P32288 370 aaKnown RBP5.95□□□□□ -1.46
TPD3YAL016W SLX8P40072 274 aa5.95□□□□□ -1.46
TPD3YAL016W YJL007CP47080 104 aa5.95□□□□□ -1.46
TPD3YAL016W CSN12P47130 423 aa5.95□□□□□ -1.46
TPD3YAL016W NOP8Q08287 484 aaPredicted RBP5.95□□□□□ -1.46
TPD3YAL016W PIB1Q06651 286 aa5.95□□□□□ -1.46
TPD3YAL016W SSA2P10592 639 aaKnown RBP5.94□□□□□ -1.46
TPD3YAL016W ATG32P40458 529 aa5.94□□□□□ -1.46
TPD3YAL016W PSE1P32337 1089 aaKnown RBP5.91□□□□□ -1.46
TPD3YAL016W KIC1P38692 1080 aa5.91□□□□□ -1.46
TPD3YAL016W ATH1P48016 1211 aa5.91□□□□□ -1.46
TPD3YAL016W VMA1P17255 1071 aaKnown RBP5.9□□□□□ -1.46
TPD3YAL016W KTR1P27810 393 aaKnown RBP5.9□□□□□ -1.46
TPD3YAL016W ERG12P07277 443 aa5.89□□□□□ -1.47
TPD3YAL016W PCS60P38137 543 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
TPD3YAL016W GRE2Q12068 342 aaKnown RBP5.89□□□□□ -1.47
TPD3YAL016W GUT1P32190 709 aa5.88□□□□□ -1.47
TPD3YAL016W RAD54P32863 898 aa5.88□□□□□ -1.47
TPD3YAL016W YGR273CP53329 174 aa5.88□□□□□ -1.47
TPD3YAL016W TYW1Q08960 810 aaKnown RBP5.88□□□□□ -1.47
TPD3YAL016W TIF1P10081 395 aaKnown RBP5.87□□□□□ -1.47
TPD3YAL016W TIF4632P39936 914 aaKnown RBP5.87□□□□□ -1.47
TPD3YAL016W KEX1P09620 729 aa5.87□□□□□ -1.47
TPD3YAL016W SSA4P22202 642 aaKnown RBP5.87□□□□□ -1.47
TPD3YAL016W CPS1P27614 576 aa5.86□□□□□ -1.47
TPD3YAL016W RPL34BP40525 121 aaKnown RBP5.86□□□□□ -1.47
TPD3YAL016W SOL3P38858 249 aa5.86□□□□□ -1.47
TPD3YAL016W TEA1P47988 759 aa5.86□□□□□ -1.47
TPD3YAL016W ORC6P38826 435 aa5.85□□□□□ -1.47
TPD3YAL016W NSR1P27476 414 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
TPD3YAL016W BIO2P32451 375 aa5.84□□□□□ -1.47
TPD3YAL016W YAP5P40574 245 aa5.84□□□□□ -1.47
TPD3YAL016W YBL036CP38197 257 aa5.84□□□□□ -1.48
TPD3YAL016W YPR204WQ08995 1032 aa5.84□□□□□ -1.48
TPD3YAL016W TGL3P40308 642 aa5.82□□□□□ -1.48
TPD3YAL016W TTI1P36097 1038 aa5.82□□□□□ -1.48
TPD3YAL016W RGR1P19263 1082 aa5.81□□□□□ -1.48
TPD3YAL016W RTG2P32608 588 aaKnown RBP5.8□□□□□ -1.48
TPD3YAL016W NOB1Q08444 459 aaKnown RBP5.8□□□□□ -1.48
TPD3YAL016W YNL108CP53929 270 aa5.8□□□□□ -1.48
TPD3YAL016W SAM3Q08986 587 aa5.8□□□□□ -1.48
TPD3YAL016W NIS1P53939 407 aa5.79□□□□□ -1.48
TPD3YAL016W ORC1P54784 914 aaPredicted RBP5.79□□□□□ -1.48
TPD3YAL016W GYP5Q12344 894 aa5.79□□□□□ -1.48
TPD3YAL016W MRX12P47084 519 aa5.78□□□□□ -1.48
TPD3YAL016W RPL34AP87262 121 aaPredicted RBP5.78□□□□□ -1.48
TPD3YAL016W MVP1P40959 511 aaKnown RBP5.78□□□□□ -1.48
TPD3YAL016W FPK1P53739 893 aa5.78□□□□□ -1.48
TPD3YAL016W PKH3Q03306 898 aaPredicted RBP5.78□□□□□ -1.48
TPD3YAL016W RAD59Q12223 238 aa5.78□□□□□ -1.48
TPD3YAL016W AIM44Q99299 758 aa5.78□□□□□ -1.48
TPD3YAL016W SCJ1P25303 377 aa5.77□□□□□ -1.49
TPD3YAL016W NST1P53935 1240 aa5.77□□□□□ -1.49
TPD3YAL016W ESS1P22696 170 aa5.76□□□□□ -1.49
TPD3YAL016W ILV3P39522 585 aaKnown RBP5.76□□□□□ -1.49
TPD3YAL016W HST2P53686 357 aa5.76□□□□□ -1.49
TPD3YAL016W YMR196WQ04336 1088 aa5.76□□□□□ -1.49
TPD3YAL016W YML083CQ04526 418 aa5.76□□□□□ -1.49
TPD3YAL016W CLB5P30283 435 aa5.75□□□□□ -1.49
TPD3YAL016W CDC3P32457 520 aaKnown RBP5.75□□□□□ -1.49
TPD3YAL016W YJU3P28321 313 aa5.74□□□□□ -1.49
TPD3YAL016W SLD2P34252 453 aa5.74□□□□□ -1.49
TPD3YAL016W DCW1P36091 449 aa5.74□□□□□ -1.49
TPD3YAL016W MMP1Q12372 583 aa5.74□□□□□ -1.49
TPD3YAL016W SUP45P12385 437 aaKnown RBP5.73□□□□□ -1.49
TPD3YAL016W CSE4P36012 229 aa5.73□□□□□ -1.49
TPD3YAL016W GAP1P19145 602 aaPredicted RBP5.72□□□□□ -1.49
TPD3YAL016W PUP1P25043 261 aa5.72□□□□□ -1.49
TPD3YAL016W ENO1P00924 437 aaKnown RBP5.72□□□□□ -1.49
TPD3YAL016W SSF1P38789 453 aaPredicted RBP5.72□□□□□ -1.49
TPD3YAL016W YPR109WQ06104 294 aa5.72□□□□□ -1.49
TPD3YAL016W ENO2P00925 437 aaKnown RBP5.71□□□□□ -1.5
TPD3YAL016W YDJ1P25491 409 aaKnown RBP5.71□□□□□ -1.5
TPD3YAL016W NOP7P53261 605 aaKnown RBP5.71□□□□□ -1.5
TPD3YAL016W ARG8P18544 423 aa5.7□□□□□ -1.5
TPD3YAL016W MPH3P0CE00 602 aa5.7□□□□□ -1.5
TPD3YAL016W SEN54Q02825 467 aaPredicted RBP5.7□□□□□ -1.5
TPD3YAL016W HAT1Q12341 374 aa5.7□□□□□ -1.5
TPD3YAL016W AI4P03878 556 aa5.69□□□□□ -1.5
TPD3YAL016W SLI15P38283 698 aa5.68□□□□□ -1.5
TPD3YAL016W GTT3P39996 337 aa5.68□□□□□ -1.5
TPD3YAL016W MRX10Q05648 414 aa5.68□□□□□ -1.5
TPD3YAL016W CSC1Q06538 782 aa5.68□□□□□ -1.5
TPD3YAL016W MST1P07236 462 aa5.68□□□□□ -1.5
TPD3YAL016W SNU71P53207 620 aaKnown RBP5.68□□□□□ -1.5
TPD3YAL016W YOL036WQ08206 761 aa5.68□□□□□ -1.5
TPD3YAL016W SIT4P20604 311 aa5.67□□□□□ -1.5
TPD3YAL016W SET4P42948 560 aa5.67□□□□□ -1.5
TPD3YAL016W HTA1P04911 132 aaKnown RBP5.66□□□□□ -1.5
TPD3YAL016W HTA2P04912 132 aa5.66□□□□□ -1.5
TPD3YAL016W TGL4P36165 910 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms