RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W CSN12P47130 423 aa3.28□□□□□ -1.88
VPS8YAL002W YML020WQ03722 664 aa3.28□□□□□ -1.88
VPS8YAL002W YBL036CP38197 257 aa3.27□□□□□ -1.89
VPS8YAL002W AIM7Q12156 149 aa3.27□□□□□ -1.89
VPS8YAL002W MAK21Q12176 1025 aaKnown RBP3.27□□□□□ -1.89
VPS8YAL002W PTC3P34221 468 aaKnown RBP3.27□□□□□ -1.89
VPS8YAL002W TYW1Q08960 810 aaKnown RBP3.27□□□□□ -1.89
VPS8YAL002W GTT3P39996 337 aa3.26□□□□□ -1.89
VPS8YAL002W SSA1P10591 642 aaKnown RBP3.26□□□□□ -1.89
VPS8YAL002W RAD54P32863 898 aa3.26□□□□□ -1.89
VPS8YAL002W BIM1P40013 344 aa3.26□□□□□ -1.89
VPS8YAL002W NUP42P49686 430 aaKnown RBP3.25□□□□□ -1.89
VPS8YAL002W CPS1P27614 576 aa3.25□□□□□ -1.89
VPS8YAL002W SLX8P40072 274 aa3.25□□□□□ -1.89
VPS8YAL002W ERG12P07277 443 aa3.25□□□□□ -1.89
VPS8YAL002W SSA2P10592 639 aaKnown RBP3.25□□□□□ -1.89
VPS8YAL002W GRE2Q12068 342 aaKnown RBP3.25□□□□□ -1.89
VPS8YAL002W UBP14P38237 781 aaKnown RBP3.24□□□□□ -1.89
VPS8YAL002W ATG32P40458 529 aa3.24□□□□□ -1.89
VPS8YAL002W SSA4P22202 642 aaKnown RBP3.23□□□□□ -1.89
VPS8YAL002W DCW1P36091 449 aa3.23□□□□□ -1.89
VPS8YAL002W KTR7P40504 517 aa3.23□□□□□ -1.89
VPS8YAL002W PKH3Q03306 898 aaPredicted RBP3.22□□□□□ -1.89
VPS8YAL002W INO80P53115 1489 aa3.22□□□□□ -1.89
VPS8YAL002W COX6P00427 148 aa3.22□□□□□ -1.89
VPS8YAL002W GEF1P37020 779 aa3.22□□□□□ -1.89
VPS8YAL002W YNL108CP53929 270 aa3.22□□□□□ -1.89
VPS8YAL002W TEA1P47988 759 aa3.21□□□□□ -1.9
VPS8YAL002W AIM44Q99299 758 aa3.21□□□□□ -1.9
VPS8YAL002W ARG8P18544 423 aa3.21□□□□□ -1.9
VPS8YAL002W RTG2P32608 588 aaKnown RBP3.21□□□□□ -1.9
VPS8YAL002W NOP7P53261 605 aaKnown RBP3.2□□□□□ -1.9
VPS8YAL002W UBP10P53874 792 aaPredicted RBP3.2□□□□□ -1.9
VPS8YAL002W PEX21P50091 288 aa3.2□□□□□ -1.9
VPS8YAL002W HPC2Q01448 625 aa3.2□□□□□ -1.9
VPS8YAL002W SUB2Q07478 446 aaKnown RBP3.2□□□□□ -1.9
VPS8YAL002W GYP5Q12344 894 aa3.2□□□□□ -1.9
VPS8YAL002W TIF4632P39936 914 aaKnown RBP3.19□□□□□ -1.9
VPS8YAL002W ESS1P22696 170 aa3.19□□□□□ -1.9
VPS8YAL002W SET4P42948 560 aa3.19□□□□□ -1.9
VPS8YAL002W VMA1P17255 1071 aaKnown RBP3.18□□□□□ -1.9
VPS8YAL002W SLD2P34252 453 aa3.18□□□□□ -1.9
VPS8YAL002W TIF1P10081 395 aaKnown RBP3.18□□□□□ -1.9
VPS8YAL002W SCJ1P25303 377 aa3.18□□□□□ -1.9
VPS8YAL002W YGL015CP33199 130 aa3.18□□□□□ -1.9
VPS8YAL002W YAP5P40574 245 aa3.18□□□□□ -1.9
VPS8YAL002W YLR326WQ06170 240 aaKnown RBP3.17□□□□□ -1.9
VPS8YAL002W WSC3Q12215 556 aa3.17□□□□□ -1.9
VPS8YAL002W GUT1P32190 709 aa3.16□□□□□ -1.9
VPS8YAL002W GLN1P32288 370 aaKnown RBP3.16□□□□□ -1.9
VPS8YAL002W HAT1Q12341 374 aa3.16□□□□□ -1.9
VPS8YAL002W THI12P42883 340 aa3.16□□□□□ -1.9
VPS8YAL002W THI5P43534 340 aa3.16□□□□□ -1.9
VPS8YAL002W THI11P47183 340 aa3.16□□□□□ -1.9
VPS8YAL002W THI13Q07748 340 aa3.16□□□□□ -1.9
VPS8YAL002W MMP1Q12372 583 aa3.16□□□□□ -1.9
VPS8YAL002W KEX1P09620 729 aa3.15□□□□□ -1.9
VPS8YAL002W RPP1BP10622 106 aaKnown RBP3.15□□□□□ -1.9
VPS8YAL002W MET10P39692 1035 aa3.15□□□□□ -1.9
VPS8YAL002W YCK3P39962 524 aa3.15□□□□□ -1.9
VPS8YAL002W BIO2P32451 375 aa3.15□□□□□ -1.91
VPS8YAL002W PCS60P38137 543 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
VPS8YAL002W YJU3P28321 313 aa3.14□□□□□ -1.91
VPS8YAL002W CDC3P32457 520 aaKnown RBP3.14□□□□□ -1.91
VPS8YAL002W YGR273CP53329 174 aa3.14□□□□□ -1.91
VPS8YAL002W YPR109WQ06104 294 aa3.14□□□□□ -1.91
VPS8YAL002W NOP53Q12080 455 aaKnown RBP3.14□□□□□ -1.91
VPS8YAL002W RAD59Q12223 238 aa3.14□□□□□ -1.91
VPS8YAL002W YML083CQ04526 418 aa3.14□□□□□ -1.91
VPS8YAL002W KTR1P27810 393 aaKnown RBP3.13□□□□□ -1.91
VPS8YAL002W TBF1Q02457 562 aa3.13□□□□□ -1.91
VPS8YAL002W YDR090CQ03193 310 aa3.13□□□□□ -1.91
VPS8YAL002W PEX29Q03370 554 aa3.13□□□□□ -1.91
VPS8YAL002W SLY41P22215 453 aa3.13□□□□□ -1.91
VPS8YAL002W TUM1Q08686 304 aaKnown RBP3.13□□□□□ -1.91
VPS8YAL002W PSE1P32337 1089 aaKnown RBP3.13□□□□□ -1.91
VPS8YAL002W FPK1P53739 893 aa3.12□□□□□ -1.91
VPS8YAL002W ENV9Q08651 330 aa3.12□□□□□ -1.91
VPS8YAL002W NIS1P53939 407 aa3.11□□□□□ -1.91
VPS8YAL002W TY1B-DR4Q07793 1604 aa3.11□□□□□ -1.91
VPS8YAL002W YDJ1P25491 409 aaKnown RBP3.11□□□□□ -1.91
VPS8YAL002W TTI1P36097 1038 aa3.11□□□□□ -1.91
VPS8YAL002W ECM23Q02710 187 aa3.11□□□□□ -1.91
VPS8YAL002W HTA1P04911 132 aaKnown RBP3.1□□□□□ -1.91
VPS8YAL002W HTA2P04912 132 aa3.1□□□□□ -1.91
VPS8YAL002W MRX12P47084 519 aa3.1□□□□□ -1.91
VPS8YAL002W ENO1P00924 437 aaKnown RBP3.1□□□□□ -1.91
VPS8YAL002W CLB5P30283 435 aa3.1□□□□□ -1.91
VPS8YAL002W ITT1Q04638 464 aa3.1□□□□□ -1.91
VPS8YAL002W UBX7P38349 436 aa3.09□□□□□ -1.91
VPS8YAL002W SNU71P53207 620 aaKnown RBP3.09□□□□□ -1.91
VPS8YAL002W CDC73Q06697 393 aa3.09□□□□□ -1.91
VPS8YAL002W ISF1P32488 338 aa3.09□□□□□ -1.91
VPS8YAL002W YOL036WQ08206 761 aa3.09□□□□□ -1.92
VPS8YAL002W RGR1P19263 1082 aa3.08□□□□□ -1.92
VPS8YAL002W YRR1Q12172 810 aa3.08□□□□□ -1.92
VPS8YAL002W TCB3Q03640 1545 aaKnown RBP3.08□□□□□ -1.92
VPS8YAL002W ENO2P00925 437 aaKnown RBP3.08□□□□□ -1.92
VPS8YAL002W NPL4P33755 580 aa3.08□□□□□ -1.92
VPS8YAL002W ORC6P38826 435 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms