RNA–Protein interactions for RNA: RUF20

RUF20, Transcript of RNA of Unknown Function, yeastyeast

Gene RUF20, Length 443 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUF20RUF20 YEL023CP39992 682 aa10.07□□□□□ -0.8
RUF20RUF20 PTC4P38089 393 aa10.05□□□□□ -0.8
RUF20RUF20 BCK2P33306 851 aa10.03□□□□□ -0.8
RUF20RUF20 CHL1P22516 861 aaPredicted RBP10□□□□□ -0.81
RUF20RUF20 PRE3P38624 215 aa9.98□□□□□ -0.81
RUF20RUF20 GRE2Q12068 342 aaKnown RBP9.97□□□□□ -0.81
RUF20RUF20 MIF2P35201 549 aa9.92□□□□□ -0.82
RUF20RUF20 MAK11P20484 414 aaKnown RBP9.91□□□□□ -0.82
RUF20RUF20 RAM2P29703 316 aa9.88□□□□□ -0.83
RUF20RUF20 EDS1P38073 919 aa9.87□□□□□ -0.83
RUF20RUF20 ATH1P48016 1211 aa9.87□□□□□ -0.83
RUF20RUF20 PML39Q03760 334 aa9.87□□□□□ -0.83
RUF20RUF20 PTC3P34221 468 aaKnown RBP9.86□□□□□ -0.83
RUF20RUF20 GUT1P32190 709 aa9.85□□□□□ -0.83
RUF20RUF20 YDR344CQ05510 147 aa9.85□□□□□ -0.83
RUF20RUF20 NST1P53935 1240 aa9.78□□□□□ -0.84
RUF20RUF20 ELP4Q02884 456 aaKnown RBP9.78□□□□□ -0.84
RUF20RUF20 COQ8P27697 501 aa9.77□□□□□ -0.85
RUF20RUF20 VRP1P37370 817 aa9.76□□□□□ -0.85
RUF20RUF20 XDJ1P39102 459 aa9.76□□□□□ -0.85
RUF20RUF20 MID1P41821 548 aa9.73□□□□□ -0.85
RUF20RUF20 SOL3P38858 249 aa9.72□□□□□ -0.85
RUF20RUF20 ARH1P48360 493 aa9.71□□□□□ -0.86
RUF20RUF20 AI4P03878 556 aa9.67□□□□□ -0.86
RUF20RUF20 MPH3P0CE00 602 aa9.67□□□□□ -0.86
RUF20RUF20 PEX29Q03370 554 aa9.65□□□□□ -0.86
RUF20RUF20 RQC2Q12532 1038 aaKnown RBP9.65□□□□□ -0.86
RUF20RUF20 ILV3P39522 585 aaKnown RBP9.63□□□□□ -0.87
RUF20RUF20 SPT23P35210 1082 aa9.6□□□□□ -0.87
RUF20RUF20 DPS1P04802 557 aaKnown RBP9.58□□□□□ -0.88
RUF20RUF20 HAP5Q02516 242 aa9.57□□□□□ -0.88
RUF20RUF20 YGR273CP53329 174 aa9.56□□□□□ -0.88
RUF20RUF20 NOP53Q12080 455 aaKnown RBP9.56□□□□□ -0.88
RUF20RUF20 BNI4P53858 892 aa9.52□□□□□ -0.89
RUF20RUF20 MPC54Q08550 464 aa9.51□□□□□ -0.89
RUF20RUF20 PTC2P39966 464 aaKnown RBP9.47□□□□□ -0.89
RUF20RUF20 YML082WQ04533 649 aaKnown RBP9.46□□□□□ -0.9
RUF20RUF20 SLI15P38283 698 aa9.45□□□□□ -0.9
RUF20RUF20 NMA111P53920 997 aa9.43□□□□□ -0.9
RUF20RUF20 DPL1Q05567 589 aa9.4□□□□□ -0.9
RUF20RUF20 RGA2Q06407 1009 aa9.39□□□□□ -0.91
RUF20RUF20 KEX1P09620 729 aa9.35□□□□□ -0.91
RUF20RUF20 DMA1P38823 416 aa9.35□□□□□ -0.91
RUF20RUF20 SRC1Q03707 834 aa9.35□□□□□ -0.91
RUF20RUF20 YPR015CQ12531 247 aa9.3□□□□□ -0.92
RUF20RUF20 ISU2Q12056 156 aa9.28□□□□□ -0.92
RUF20RUF20 RAM1P22007 431 aa9.27□□□□□ -0.93
RUF20RUF20 SET1P38827 1080 aaKnown RBP9.27□□□□□ -0.93
RUF20RUF20 CDC73Q06697 393 aa9.26□□□□□ -0.93
RUF20RUF20 RGA1P39083 1007 aa9.25□□□□□ -0.93
RUF20RUF20 YLR326WQ06170 240 aaKnown RBP9.25□□□□□ -0.93
RUF20RUF20 UBP14P38237 781 aaKnown RBP9.22□□□□□ -0.93
RUF20RUF20 VHR2P40041 505 aa9.22□□□□□ -0.93
RUF20RUF20 RAS1P01119 309 aa9.21□□□□□ -0.94
RUF20RUF20 PCS60P38137 543 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
RUF20RUF20 GYP1Q08484 637 aa9.17□□□□□ -0.94
RUF20RUF20 PDR1P12383 1068 aa9.16□□□□□ -0.94
RUF20RUF20 RAD54P32863 898 aa9.15□□□□□ -0.94
RUF20RUF20 AMS1P22855 1083 aa9.11□□□□□ -0.95
RUF20RUF20 RPP1BP10622 106 aaKnown RBP9.09□□□□□ -0.95
RUF20RUF20 SDH2P21801 266 aa9.08□□□□□ -0.96
RUF20RUF20 SAS4Q04003 481 aa9.08□□□□□ -0.96
RUF20RUF20 YDR090CQ03193 310 aa9.04□□□□□ -0.96
RUF20RUF20 TRK1P12685 1235 aa9.02□□□□□ -0.97
RUF20RUF20 KIC1P38692 1080 aa9.01□□□□□ -0.97
RUF20RUF20 IFH1P39520 1085 aa9□□□□□ -0.97
RUF20RUF20 YEL077CQ3E7X8 1277 aa8.99□□□□□ -0.97
RUF20RUF20 YRR1Q12172 810 aa8.98□□□□□ -0.97
RUF20RUF20 PEX21P50091 288 aa8.97□□□□□ -0.97
RUF20RUF20 BUD20Q08004 166 aaPredicted RBP8.97□□□□□ -0.97
RUF20RUF20 GAP1P19145 602 aaPredicted RBP8.95□□□□□ -0.98
RUF20RUF20 MRF1P30775 413 aaPredicted RBP8.95□□□□□ -0.98
RUF20RUF20 PRT1P06103 763 aaKnown RBP8.93□□□□□ -0.98
RUF20RUF20 STR2P47164 639 aa8.93□□□□□ -0.98
RUF20RUF20 CSC1Q06538 782 aa8.92□□□□□ -0.98
RUF20RUF20 TFB4Q12004 338 aa8.92□□□□□ -0.98
RUF20RUF20 REF2P42073 533 aaPredicted RBP8.91□□□□□ -0.98
RUF20RUF20 ISM1P48526 1002 aa8.91□□□□□ -0.98
RUF20RUF20 YPR148CQ06523 435 aa8.91□□□□□ -0.98
RUF20RUF20 TUM1Q08686 304 aaKnown RBP8.9□□□□□ -0.98
RUF20RUF20 NUD1P32336 851 aa8.89□□□□□ -0.99
RUF20RUF20 SAS10Q12136 610 aaPredicted RBP8.88□□□□□ -0.99
RUF20RUF20 ORC6P38826 435 aa8.86□□□□□ -0.99
RUF20RUF20 ERG12P07277 443 aa8.84□□□□□ -0.99
RUF20RUF20 NPL4P33755 580 aa8.82□□□□□ -1
RUF20RUF20 TY1A-DR4O74302 440 aa8.79□□□□□ -1
RUF20RUF20 TY1A-HP0C2I4 478 aaKnown RBP8.79□□□□□ -1
RUF20RUF20 TY1A-AP0CX57 440 aa8.79□□□□□ -1
RUF20RUF20 TY1A-PR1P0CX58 440 aa8.79□□□□□ -1
RUF20RUF20 TY1A-ORP0CX59 440 aa8.79□□□□□ -1
RUF20RUF20 TY1A-PR2P0CX60 440 aa8.79□□□□□ -1
RUF20RUF20 TY1A-DR5P0CX65 440 aa8.79□□□□□ -1
RUF20RUF20 TY1A-ER2P0CX66 440 aa8.79□□□□□ -1
RUF20RUF20 TY1A-GR3P0CX67 440 aa8.79□□□□□ -1
RUF20RUF20 TY1A-LR1P0CX68 440 aa8.79□□□□□ -1
RUF20RUF20 TY1A-MR2P0CX69 440 aa8.79□□□□□ -1
RUF20RUF20 CST6P40535 587 aa8.79□□□□□ -1
RUF20RUF20 TY1A-JR2P47099 440 aa8.79□□□□□ -1
RUF20RUF20 VPS70P47161 811 aa8.79□□□□□ -1
RUF20RUF20 TY1A-DR1Q03856 440 aa8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms