RNA–Protein interactions for RNA: RDN5-3

RDN5-3, Transcript of Variant 5S ribosomal RNA (5S rRNA) gene, yeastyeast

Gene RDN5-3, Length 119 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN5-3RDN5-3 TY1B-NL1Q12112 1755 aa9.47□□□□□ -0.89
RDN5-3RDN5-3 TY1B-GR1Q12141 1755 aa9.47□□□□□ -0.89
RDN5-3RDN5-3 TY1B-BLQ12490 1755 aa9.47□□□□□ -0.89
RDN5-3RDN5-3 TY3B-GQ99315 1547 aa9.46□□□□□ -0.89
RDN5-3RDN5-3 RQC2Q12532 1038 aaKnown RBP9.42□□□□□ -0.9
RDN5-3RDN5-3 GEA2P39993 1459 aaKnown RBP9.41□□□□□ -0.9
RDN5-3RDN5-3 CAT8P39113 1433 aa9.41□□□□□ -0.9
RDN5-3RDN5-3 YBT1P32386 1661 aa9.41□□□□□ -0.9
RDN5-3RDN5-3 ESC1Q03661 1658 aaKnown RBP9.4□□□□□ -0.9
RDN5-3RDN5-3 IRC20Q06554 1556 aa9.4□□□□□ -0.9
RDN5-3RDN5-3 VPS15P22219 1454 aa9.39□□□□□ -0.91
RDN5-3RDN5-3 NTE1Q04958 1679 aa9.37□□□□□ -0.91
RDN5-3RDN5-3 RPO21P04050 1733 aaKnown RBP9.36□□□□□ -0.91
RDN5-3RDN5-3 RTT106P40161 455 aa9.34□□□□□ -0.91
RDN5-3RDN5-3 RPA190P10964 1664 aaKnown RBP9.34□□□□□ -0.91
RDN5-3RDN5-3 PDR10P51533 1564 aa9.33□□□□□ -0.92
RDN5-3RDN5-3 POL5P39985 1022 aaKnown RBP9.31□□□□□ -0.92
RDN5-3RDN5-3 DNF1P32660 1571 aa9.3□□□□□ -0.92
RDN5-3RDN5-3 SRB8P25648 1427 aa9.3□□□□□ -0.92
RDN5-3RDN5-3 NSR1P27476 414 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
RDN5-3RDN5-3 GCN2P15442 1659 aa9.26□□□□□ -0.93
RDN5-3RDN5-3 PDR12Q02785 1511 aa9.26□□□□□ -0.93
RDN5-3RDN5-3 ARO1P08566 1588 aaKnown RBP9.24□□□□□ -0.93
RDN5-3RDN5-3 NUP159P40477 1460 aa9.24□□□□□ -0.93
RDN5-3RDN5-3 GDB1Q06625 1536 aa9.22□□□□□ -0.93
RDN5-3RDN5-3 SEC3P33332 1336 aaKnown RBP9.22□□□□□ -0.93
RDN5-3RDN5-3 ENP1P38333 483 aaKnown RBP9.2□□□□□ -0.94
RDN5-3RDN5-3 MMS1Q06211 1407 aa9.19□□□□□ -0.94
RDN5-3RDN5-3 PDR5P33302 1511 aaKnown RBP9.18□□□□□ -0.94
RDN5-3RDN5-3 MET10P39692 1035 aa9.18□□□□□ -0.94
RDN5-3RDN5-3 NOP2P40991 618 aaKnown RBP9.18□□□□□ -0.94
RDN5-3RDN5-3 IQG1Q12280 1495 aa9.18□□□□□ -0.94
RDN5-3RDN5-3 SPO14P36126 1683 aa9.16□□□□□ -0.94
RDN5-3RDN5-3 NUP157P40064 1391 aaKnown RBP9.14□□□□□ -0.95
RDN5-3RDN5-3 CKB1P43639 278 aa9.14□□□□□ -0.95
RDN5-3RDN5-3 YRF1-1P0CX20 1796 aa9.12□□□□□ -0.95
RDN5-3RDN5-3 YRF1-5P0CX21 1796 aa9.12□□□□□ -0.95
RDN5-3RDN5-3 YRF1-8P0CX22 1796 aa9.12□□□□□ -0.95
RDN5-3RDN5-3 NOP7P53261 605 aaKnown RBP9.11□□□□□ -0.95
RDN5-3RDN5-3 BUD21Q08492 214 aaPredicted RBP9.11□□□□□ -0.95
RDN5-3RDN5-3 MET5P47169 1442 aa9.11□□□□□ -0.95
RDN5-3RDN5-3 YSP2Q06681 1438 aa9.11□□□□□ -0.95
RDN5-3RDN5-3 BUD3P25558 1636 aa9.08□□□□□ -0.96
RDN5-3RDN5-3 SEC7P11075 2009 aaKnown RBP9.06□□□□□ -0.96
RDN5-3RDN5-3 SPT7P35177 1332 aa9.05□□□□□ -0.96
RDN5-3RDN5-3 PAF1P38351 445 aa9.05□□□□□ -0.96
RDN5-3RDN5-3 YOR093CQ12275 1648 aa9.05□□□□□ -0.96
RDN5-3RDN5-3 MHP1P43638 1398 aa9.02□□□□□ -0.97
RDN5-3RDN5-3 MTC1P47018 478 aaKnown RBP9.02□□□□□ -0.97
RDN5-3RDN5-3 CHC1P22137 1653 aaKnown RBP9□□□□□ -0.97
RDN5-3RDN5-3 BFR2Q06631 534 aaKnown RBP9□□□□□ -0.97
RDN5-3RDN5-3 BNR1P40450 1375 aa8.99□□□□□ -0.97
RDN5-3RDN5-3 LTE1P07866 1435 aa8.97□□□□□ -0.97
RDN5-3RDN5-3 TY3B-IQ7LHG5 1498 aaKnown RBP8.97□□□□□ -0.97
RDN5-3RDN5-3 RAV1P47104 1357 aa8.96□□□□□ -0.98
RDN5-3RDN5-3 RTC1Q08281 1341 aa8.93□□□□□ -0.98
RDN5-3RDN5-3 YLR419WQ06698 1435 aaKnown RBP8.93□□□□□ -0.98
RDN5-3RDN5-3 TRM3Q07527 1436 aa8.91□□□□□ -0.98
RDN5-3RDN5-3 SCT1P32784 759 aa8.91□□□□□ -0.98
RDN5-3RDN5-3 PRS1P32895 427 aaKnown RBP8.9□□□□□ -0.98
RDN5-3RDN5-3 DOP1Q03921 1698 aa8.88□□□□□ -0.99
RDN5-3RDN5-3 NUP188P52593 1655 aaKnown RBP8.88□□□□□ -0.99
RDN5-3RDN5-3 VMR1P38735 1592 aa8.86□□□□□ -0.99
RDN5-3RDN5-3 PSD2P53037 1138 aaKnown RBP8.86□□□□□ -0.99
RDN5-3RDN5-3 IML1P47170 1584 aa8.85□□□□□ -0.99
RDN5-3RDN5-3 ESL2P36168 1195 aa8.84□□□□□ -0.99
RDN5-3RDN5-3 PDR11P40550 1411 aa8.84□□□□□ -0.99
RDN5-3RDN5-3 PDS5Q04264 1277 aa8.83□□□□□ -1
RDN5-3RDN5-3 DRS2P39524 1355 aa8.83□□□□□ -1
RDN5-3RDN5-3 LEU3P08638 886 aa8.8□□□□□ -1
RDN5-3RDN5-3 ORC1P54784 914 aaPredicted RBP8.8□□□□□ -1
RDN5-3RDN5-3 DNF2Q12675 1612 aa8.8□□□□□ -1
RDN5-3RDN5-3 TAF5P38129 798 aa8.79□□□□□ -1
RDN5-3RDN5-3 NUP192P47054 1683 aa8.78□□□□□ -1
RDN5-3RDN5-3 TFA1P36100 482 aa8.78□□□□□ -1
RDN5-3RDN5-3 KIP3P53086 805 aaKnown RBP8.77□□□□□ -1.01
RDN5-3RDN5-3 MLP1Q02455 1875 aaKnown RBP8.74□□□□□ -1.01
RDN5-3RDN5-3 IOC4Q04213 475 aa8.73□□□□□ -1.01
RDN5-3RDN5-3 URN1Q06525 465 aaKnown RBP8.72□□□□□ -1.01
RDN5-3RDN5-3 RPP0P05317 312 aaKnown RBP8.71□□□□□ -1.02
RDN5-3RDN5-3 SPE2P21182 396 aa8.7□□□□□ -1.02
RDN5-3RDN5-3 HAP1P0CE41 1502 aa8.67□□□□□ -1.02
RDN5-3RDN5-3 IPL1P38991 367 aa8.67□□□□□ -1.02
RDN5-3RDN5-3 BCK1Q01389 1478 aa8.67□□□□□ -1.02
RDN5-3RDN5-3 VPS27P40343 622 aaKnown RBP8.65□□□□□ -1.02
RDN5-3RDN5-3 NST1P53935 1240 aa8.65□□□□□ -1.02
RDN5-3RDN5-3 CDC45Q08032 650 aa8.65□□□□□ -1.02
RDN5-3RDN5-3 NAP1P25293 417 aaKnown RBP8.64□□□□□ -1.03
RDN5-3RDN5-3 ALD4P46367 519 aaKnown RBP8.64□□□□□ -1.03
RDN5-3RDN5-3 TYS1P36421 394 aaKnown RBP8.62□□□□□ -1.03
RDN5-3RDN5-3 YAP3P38749 330 aa8.62□□□□□ -1.03
RDN5-3RDN5-3 FKH1P40466 484 aa8.62□□□□□ -1.03
RDN5-3RDN5-3 YRB30P53107 440 aaPredicted RBP8.62□□□□□ -1.03
RDN5-3RDN5-3 TAF8Q03750 510 aa8.61□□□□□ -1.03
RDN5-3RDN5-3 RTG3P38165 486 aa8.6□□□□□ -1.03
RDN5-3RDN5-3 BNI1P41832 1953 aa8.59□□□□□ -1.03
RDN5-3RDN5-3 CHZ1P40019 153 aaPredicted RBP8.59□□□□□ -1.03
RDN5-3RDN5-3 CFT1Q06632 1357 aaKnown RBP8.59□□□□□ -1.03
RDN5-3RDN5-3 RAD9P14737 1309 aa8.58□□□□□ -1.04
RDN5-3RDN5-3 SNF2P22082 1703 aa8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms