RNA–Protein interactions for RNA: ENST00000642082.1

CASC19-277, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-277ENST00000642082 ASTLQ6HA08 431 aaPredicted RBP15.34■□□□□ 0.05
CASC19-277ENST00000642082 ATMINO43313 823 aaPredicted RBP15.29■□□□□ 0.04
CASC19-277ENST00000642082 SCUBE2Q9NQ36 999 aa15.26■□□□□ 0.03
CASC19-277ENST00000642082 MS4A3Q96HJ5 214 aa15.22■□□□□ 0.03
CASC19-277ENST00000642082 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
CASC19-277ENST00000642082 CDAN1Q8IWY9 1227 aa15.19■□□□□ 0.02
CASC19-277ENST00000642082 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
CASC19-277ENST00000642082 ATN1P54259 1190 aaPredicted RBP15.07■□□□□ 0
CASC19-277ENST00000642082 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
CASC19-277ENST00000642082 POTEFA5A3E0 1075 aa15.05■□□□□ -0
CASC19-277ENST00000642082 NISCHQ9Y2I1 1504 aa14.96□□□□□ -0.01
CASC19-277ENST00000642082 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
CASC19-277ENST00000642082 BMP2KQ9NSY1 1161 aaPredicted RBP14.89□□□□□ -0.03
CASC19-277ENST00000642082 SPNS2Q8IVW8 549 aa14.85□□□□□ -0.03
CASC19-277ENST00000642082 ST18O60284 1047 aa14.84□□□□□ -0.03
CASC19-277ENST00000642082 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
CASC19-277ENST00000642082 COLQQ9Y215 455 aaPredicted RBP14.82□□□□□ -0.04
CASC19-277ENST00000642082 TRPC6Q9Y210 931 aa14.82□□□□□ -0.04
CASC19-277ENST00000642082 CCDC61Q9Y6R9 512 aa14.82□□□□□ -0.04
CASC19-277ENST00000642082 KIF12Q96FN5 646 aa14.81□□□□□ -0.04
CASC19-277ENST00000642082 SEC24BO95487 1268 aa14.77□□□□□ -0.04
CASC19-277ENST00000642082 TIE1P35590 1138 aa14.76□□□□□ -0.05
CASC19-277ENST00000642082 SLAIN1Q8ND83 568 aa14.72□□□□□ -0.05
CASC19-277ENST00000642082 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
CASC19-277ENST00000642082 TTLL13PA6NNM8 815 aa14.66□□□□□ -0.06
CASC19-277ENST00000642082 MAP3K13O43283 966 aa14.65□□□□□ -0.06
CASC19-277ENST00000642082 IER5LQ5T953 404 aa14.61□□□□□ -0.07
CASC19-277ENST00000642082 TMEM121BQ9BXQ6 578 aaPredicted RBP14.59□□□□□ -0.07
CASC19-277ENST00000642082 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
CASC19-277ENST00000642082 MARVELD3Q96A59 401 aa14.47□□□□□ -0.09
CASC19-277ENST00000642082 SNPHO15079 494 aa14.43□□□□□ -0.1
CASC19-277ENST00000642082 PLCG2P16885 1265 aa14.41□□□□□ -0.1
CASC19-277ENST00000642082 RASEFQ8IZ41 740 aa14.41□□□□□ -0.1
CASC19-277ENST00000642082 SGIP1Q9BQI5 828 aa14.38□□□□□ -0.11
CASC19-277ENST00000642082 PCDHB13Q9Y5F0 798 aa14.35□□□□□ -0.11
CASC19-277ENST00000642082 KRTAP3-3Q9BYR6 98 aa14.34□□□□□ -0.11
CASC19-277ENST00000642082 KRTAP3-2Q9BYR7 98 aa14.34□□□□□ -0.11
CASC19-277ENST00000642082 IRX5P78411 483 aaPredicted RBP14.33□□□□□ -0.12
CASC19-277ENST00000642082 EMP3P54852 163 aa14.28□□□□□ -0.12
CASC19-277ENST00000642082 TMEM106CQ9BVX2 250 aa14.28□□□□□ -0.12
CASC19-277ENST00000642082 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.27□□□□□ -0.12
CASC19-277ENST00000642082 POTEB3A0JP26 581 aa14.25□□□□□ -0.13
CASC19-277ENST00000642082 POTEBQ6S5H4 581 aa14.25□□□□□ -0.13
CASC19-277ENST00000642082 IFNL1Q8IU54 200 aa14.25□□□□□ -0.13
CASC19-277ENST00000642082 HS3ST6Q96QI5 342 aa14.22□□□□□ -0.13
CASC19-277ENST00000642082 OCEL1Q9H607 264 aa14.21□□□□□ -0.13
CASC19-277ENST00000642082 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
CASC19-277ENST00000642082 PROM2Q8N271 834 aa14.2□□□□□ -0.14
CASC19-277ENST00000642082 FAM205CA6NFA0 338 aa14.16□□□□□ -0.14
CASC19-277ENST00000642082 MIER1Q8N108 512 aa14.15□□□□□ -0.14
CASC19-277ENST00000642082 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
CASC19-277ENST00000642082 NUBP1P53384 320 aa14.01□□□□□ -0.17
CASC19-277ENST00000642082 RNF166Q96A37 237 aaPredicted RBP14.01□□□□□ -0.17
CASC19-277ENST00000642082 C3orf67Q6ZVT6 689 aa14□□□□□ -0.17
CASC19-277ENST00000642082 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
CASC19-277ENST00000642082 FAM212AQ96EL1 285 aa13.91□□□□□ -0.18
CASC19-277ENST00000642082 L3MBTL3Q96JM7 780 aaPredicted RBP13.9□□□□□ -0.18
CASC19-277ENST00000642082 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.19
CASC19-277ENST00000642082 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
CASC19-277ENST00000642082 MYT1LQ9UL68 1186 aa13.85□□□□□ -0.19
CASC19-277ENST00000642082 PCDHB8Q9UN66 801 aa13.8□□□□□ -0.2
CASC19-277ENST00000642082 HOXB3P14651 431 aaPredicted RBP13.8□□□□□ -0.2
CASC19-277ENST00000642082 HOXB1P14653 301 aaPredicted RBP13.78□□□□□ -0.2
CASC19-277ENST00000642082 ERBB3P21860 1342 aa13.77□□□□□ -0.2
CASC19-277ENST00000642082 PYGBP11216 843 aa13.76□□□□□ -0.21
CASC19-277ENST00000642082 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
CASC19-277ENST00000642082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.7□□□□□ -0.227e-8■□□□□ 10.2
CASC19-277ENST00000642082 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
CASC19-277ENST00000642082 ZNF710Q8N1W2 664 aa13.69□□□□□ -0.22
CASC19-277ENST00000642082 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
CASC19-277ENST00000642082 VARS2Q5ST30 1063 aaKnown RBP13.65□□□□□ -0.22
CASC19-277ENST00000642082 PTGER2P43116 358 aa13.63□□□□□ -0.23
CASC19-277ENST00000642082 DOK7Q18PE1 504 aa13.62□□□□□ -0.23
CASC19-277ENST00000642082 ILDR1Q86SU0 546 aaPredicted RBP13.6□□□□□ -0.23
CASC19-277ENST00000642082 DPY19L2Q6NUT2 758 aa13.59□□□□□ -0.23
CASC19-277ENST00000642082 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
CASC19-277ENST00000642082 ZNF467Q7Z7K2 595 aaPredicted RBP13.54□□□□□ -0.24
CASC19-277ENST00000642082 BOLA1Q9Y3E2 137 aa13.54□□□□□ -0.24
CASC19-277ENST00000642082 G3V3G9 751 aa13.51□□□□□ -0.25
CASC19-277ENST00000642082 RIMBP2O15034 1052 aa13.51□□□□□ -0.25
CASC19-277ENST00000642082 PLA2G2EQ9NZK7 142 aa13.48□□□□□ -0.25
CASC19-277ENST00000642082 PSEN1P49768 467 aa13.46□□□□□ -0.25
CASC19-277ENST00000642082 ANKRD13DQ6ZTN6 518 aa13.44□□□□□ -0.26
CASC19-277ENST00000642082 ZSWIM6Q9HCJ5 1215 aa13.41□□□□□ -0.26
CASC19-277ENST00000642082 GPR153Q6NV75 609 aa13.36□□□□□ -0.27
CASC19-277ENST00000642082 CHRM1P11229 460 aaPredicted RBP13.33□□□□□ -0.28
CASC19-277ENST00000642082 LSM11P83369 360 aaKnown RBP eCLIP13.32□□□□□ -0.28
CASC19-277ENST00000642082 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
CASC19-277ENST00000642082 GSE1Q14687 1217 aa13.3□□□□□ -0.28
CASC19-277ENST00000642082 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
CASC19-277ENST00000642082 PDAP1Q13442 181 aaKnown RBP13.29□□□□□ -0.28
CASC19-277ENST00000642082 HCSTQ9UBK5 93 aa13.28□□□□□ -0.28
CASC19-277ENST00000642082 TMEM92Q6UXU6 159 aa13.24□□□□□ -0.29
CASC19-277ENST00000642082 ZNF316A6NFI3 1004 aaPredicted RBP13.21□□□□□ -0.29
CASC19-277ENST00000642082 ARSIQ5FYB1 569 aa13.2□□□□□ -0.3
CASC19-277ENST00000642082 CCDC180Q9P1Z9 1646 aa13.19□□□□□ -0.3
CASC19-277ENST00000642082 ABCC9O60706 1549 aa13.16□□□□□ -0.3
CASC19-277ENST00000642082 MICALL2Q8IY33 904 aa13.13□□□□□ -0.31
CASC19-277ENST00000642082 PBX2P40425 430 aa13.12□□□□□ -0.31
CASC19-277ENST00000642082 KHSRPQ92945 711 aaKnown RBP eCLIP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms