RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 METRNQ9UJH8 293 aa14.23□□□□□ -0.13
CASC19-248ENST00000641674 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
CASC19-248ENST00000641674 PLSCR2Q9NRY7 297 aa14.2□□□□□ -0.14
CASC19-248ENST00000641674 POTEJP0CG39 1038 aa14.19□□□□□ -0.14
CASC19-248ENST00000641674 MIER1Q8N108 512 aa14.17□□□□□ -0.14
CASC19-248ENST00000641674 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
CASC19-248ENST00000641674 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
CASC19-248ENST00000641674 ATN1P54259 1190 aaPredicted RBP14.15□□□□□ -0.14
CASC19-248ENST00000641674 TRPC6Q9Y210 931 aa14.15□□□□□ -0.14
CASC19-248ENST00000641674 C7P10643 843 aa14.14□□□□□ -0.15
CASC19-248ENST00000641674 RASEFQ8IZ41 740 aa14.13□□□□□ -0.15
CASC19-248ENST00000641674 MAP3K13O43283 966 aa14.09□□□□□ -0.15
CASC19-248ENST00000641674 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
CASC19-248ENST00000641674 PLEKHG5O94827 1062 aa14.08□□□□□ -0.16
CASC19-248ENST00000641674 POTEMA6NI47 508 aa14.07□□□□□ -0.16
CASC19-248ENST00000641674 POTEFA5A3E0 1075 aa14.03□□□□□ -0.16
CASC19-248ENST00000641674 POTEGQ6S5H5 508 aa14.03□□□□□ -0.16
CASC19-248ENST00000641674 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
CASC19-248ENST00000641674 TIE1P35590 1138 aa13.96□□□□□ -0.17
CASC19-248ENST00000641674 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.17
CASC19-248ENST00000641674 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
CASC19-248ENST00000641674 NUBP1P53384 320 aa13.92□□□□□ -0.18
CASC19-248ENST00000641674 LCE2DQ5TA82 110 aaPredicted RBP13.92□□□□□ -0.18
CASC19-248ENST00000641674 SCUBE2Q9NQ36 999 aa13.92□□□□□ -0.18
CASC19-248ENST00000641674 COLQQ9Y215 455 aaPredicted RBP13.92□□□□□ -0.18
CASC19-248ENST00000641674 FAM163AQ96GL9 167 aaPredicted RBP13.89□□□□□ -0.19
CASC19-248ENST00000641674 PCDHB13Q9Y5F0 798 aa13.89□□□□□ -0.19
CASC19-248ENST00000641674 FKBP8Q14318 412 aa13.86□□□□□ -0.19
CASC19-248ENST00000641674 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
CASC19-248ENST00000641674 SEC24BO95487 1268 aa13.84□□□□□ -0.19
CASC19-248ENST00000641674 IFNL1Q8IU54 200 aa13.83□□□□□ -0.19
CASC19-248ENST00000641674 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
CASC19-248ENST00000641674 SGIP1Q9BQI5 828 aa13.82□□□□□ -0.2
CASC19-248ENST00000641674 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
CASC19-248ENST00000641674 TMEM106CQ9BVX2 250 aa13.75□□□□□ -0.21
CASC19-248ENST00000641674 IER5LQ5T953 404 aa13.74□□□□□ -0.21
CASC19-248ENST00000641674 PCDH10Q9P2E7 1040 aa13.72□□□□□ -0.21
CASC19-248ENST00000641674 PYGBP11216 843 aa13.68□□□□□ -0.22
CASC19-248ENST00000641674 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
CASC19-248ENST00000641674 NISCHQ9Y2I1 1504 aa13.68□□□□□ -0.22
CASC19-248ENST00000641674 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
CASC19-248ENST00000641674 PLCG2P16885 1265 aa13.63□□□□□ -0.23
CASC19-248ENST00000641674 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
CASC19-248ENST00000641674 PCDHB8Q9UN66 801 aa13.62□□□□□ -0.23
CASC19-248ENST00000641674 ST18O60284 1047 aa13.55□□□□□ -0.24
CASC19-248ENST00000641674 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
CASC19-248ENST00000641674 FBXO3Q9UK99 471 aa13.54□□□□□ -0.24
CASC19-248ENST00000641674 OCEL1Q9H607 264 aa13.53□□□□□ -0.24
CASC19-248ENST00000641674 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
CASC19-248ENST00000641674 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
CASC19-248ENST00000641674 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
CASC19-248ENST00000641674 GSE1Q14687 1217 aa13.4□□□□□ -0.26
CASC19-248ENST00000641674 PDCD7Q8N8D1 485 aaKnown RBP13.4□□□□□ -0.26
CASC19-248ENST00000641674 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
CASC19-248ENST00000641674 MARVELD3Q96A59 401 aa13.34□□□□□ -0.27
CASC19-248ENST00000641674 GOLGA2Q08379 1002 aa13.33□□□□□ -0.27
CASC19-248ENST00000641674 MKRN3Q13064 507 aaKnown RBP13.33□□□□□ -0.27
CASC19-248ENST00000641674 PSEN1P49768 467 aa13.32□□□□□ -0.28
CASC19-248ENST00000641674 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
CASC19-248ENST00000641674 SNPHO15079 494 aa13.3□□□□□ -0.28
CASC19-248ENST00000641674 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
CASC19-248ENST00000641674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.287e-8■□□□□ 10.2
CASC19-248ENST00000641674 C3orf67Q6ZVT6 689 aa13.29□□□□□ -0.28
CASC19-248ENST00000641674 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
CASC19-248ENST00000641674 DPY19L2Q6NUT2 758 aa13.24□□□□□ -0.29
CASC19-248ENST00000641674 IFNLR1Q8IU57 520 aaPredicted RBP13.24□□□□□ -0.29
CASC19-248ENST00000641674 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
CASC19-248ENST00000641674 PDAP1Q13442 181 aaKnown RBP13.21□□□□□ -0.29
CASC19-248ENST00000641674 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
CASC19-248ENST00000641674 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
CASC19-248ENST00000641674 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
CASC19-248ENST00000641674 CABP2Q9NPB3 220 aa13.2□□□□□ -0.3
CASC19-248ENST00000641674 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
CASC19-248ENST00000641674 EMP3P54852 163 aa13.17□□□□□ -0.3
CASC19-248ENST00000641674 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
CASC19-248ENST00000641674 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
CASC19-248ENST00000641674 FAM205CA6NFA0 338 aa13.1□□□□□ -0.31
CASC19-248ENST00000641674 HS3ST6Q96QI5 342 aa13.09□□□□□ -0.31
CASC19-248ENST00000641674 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
CASC19-248ENST00000641674 KRTAP3-3Q9BYR6 98 aa13.07□□□□□ -0.32
CASC19-248ENST00000641674 KRTAP3-2Q9BYR7 98 aa13.07□□□□□ -0.32
CASC19-248ENST00000641674 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
CASC19-248ENST00000641674 G3V3G9 751 aa13.04□□□□□ -0.32
CASC19-248ENST00000641674 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.33
CASC19-248ENST00000641674 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
CASC19-248ENST00000641674 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
CASC19-248ENST00000641674 TMEM92Q6UXU6 159 aa12.9□□□□□ -0.34
CASC19-248ENST00000641674 DOK7Q18PE1 504 aa12.89□□□□□ -0.35
CASC19-248ENST00000641674 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
CASC19-248ENST00000641674 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
CASC19-248ENST00000641674 ERBB3P21860 1342 aa12.88□□□□□ -0.35
CASC19-248ENST00000641674 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
CASC19-248ENST00000641674 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
CASC19-248ENST00000641674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.83□□□□□ -0.36
CASC19-248ENST00000641674 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
CASC19-248ENST00000641674 ZFP91Q96JP5 570 aaPredicted RBP12.83□□□□□ -0.36
CASC19-248ENST00000641674 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
CASC19-248ENST00000641674 VARS2Q5ST30 1063 aaKnown RBP12.81□□□□□ -0.36
CASC19-248ENST00000641674 RIMBP2O15034 1052 aa12.79□□□□□ -0.36
CASC19-248ENST00000641674 SOX12O15370 315 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms