RNA–Protein interactions for RNA: ENST00000641549.1

PTPRVP-205, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

BASIC

Gene PTPRVP, Length 5,067 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-205ENST00000641549 KCNH8Q96L42 1107 aa18.14■□□□□ 0.49
PTPRVP-205ENST00000641549 ANP32AP39687 249 aaKnown RBP18.12■□□□□ 0.49
PTPRVP-205ENST00000641549 CARMIL1Q5VZK9 1371 aa18.11■□□□□ 0.49
PTPRVP-205ENST00000641549 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
PTPRVP-205ENST00000641549 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTPRVP-205ENST00000641549 CUX2O14529 1486 aa18.09■□□□□ 0.49
PTPRVP-205ENST00000641549 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.08■□□□□ 0.49
PTPRVP-205ENST00000641549 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
PTPRVP-205ENST00000641549 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
PTPRVP-205ENST00000641549 FKBP8Q14318 412 aa18.07■□□□□ 0.48
PTPRVP-205ENST00000641549 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
PTPRVP-205ENST00000641549 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
PTPRVP-205ENST00000641549 CDCA8Q53HL2 280 aa18.01■□□□□ 0.47
PTPRVP-205ENST00000641549 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
PTPRVP-205ENST00000641549 SOGA1O94964 1423 aa18■□□□□ 0.47
PTPRVP-205ENST00000641549 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
PTPRVP-205ENST00000641549 UPF2Q9HAU5 1272 aaKnown RBP17.98■□□□□ 0.47
PTPRVP-205ENST00000641549 PPP1R15AO75807 674 aaPredicted RBP17.98■□□□□ 0.47
PTPRVP-205ENST00000641549 TOP2AP11388 1531 aaKnown RBP17.97■□□□□ 0.47
PTPRVP-205ENST00000641549 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
PTPRVP-205ENST00000641549 MIER1Q8N108 512 aa17.94■□□□□ 0.46
PTPRVP-205ENST00000641549 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
PTPRVP-205ENST00000641549 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
PTPRVP-205ENST00000641549 CCDC136Q96JN2 1154 aa17.92■□□□□ 0.46
PTPRVP-205ENST00000641549 RGL3Q3MIN7 710 aa17.92■□□□□ 0.46
PTPRVP-205ENST00000641549 TIMELESSQ9UNS1 1208 aa17.91■□□□□ 0.46
PTPRVP-205ENST00000641549 HIRIP3Q9BW71 556 aaPredicted RBP17.89■□□□□ 0.45
PTPRVP-205ENST00000641549 NPM2Q86SE8 214 aaKnown RBP17.89■□□□□ 0.45
PTPRVP-205ENST00000641549 CARMIL2Q6F5E8 1435 aa17.88■□□□□ 0.45
PTPRVP-205ENST00000641549 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
PTPRVP-205ENST00000641549 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
PTPRVP-205ENST00000641549 CFAP53Q96M91 514 aa17.86■□□□□ 0.45
PTPRVP-205ENST00000641549 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
PTPRVP-205ENST00000641549 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
PTPRVP-205ENST00000641549 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
PTPRVP-205ENST00000641549 HSP90AA1P07900 732 aaKnown RBP17.83■□□□□ 0.45
PTPRVP-205ENST00000641549 ARHGAP35Q9NRY4 1499 aa17.83■□□□□ 0.45
PTPRVP-205ENST00000641549 ARID4BQ4LE39 1312 aaPredicted RBP17.82■□□□□ 0.44
PTPRVP-205ENST00000641549 KANK1Q14678 1352 aa17.82■□□□□ 0.44
PTPRVP-205ENST00000641549 WIZO95785 1651 aa17.81■□□□□ 0.44
PTPRVP-205ENST00000641549 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
PTPRVP-205ENST00000641549 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
PTPRVP-205ENST00000641549 SETD5Q9C0A6 1442 aa17.78■□□□□ 0.44
PTPRVP-205ENST00000641549 SIN3AQ96ST3 1273 aa17.76■□□□□ 0.43
PTPRVP-205ENST00000641549 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
PTPRVP-205ENST00000641549 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
PTPRVP-205ENST00000641549 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
PTPRVP-205ENST00000641549 ANP32BQ92688 251 aaKnown RBP17.73■□□□□ 0.43
PTPRVP-205ENST00000641549 RAPGEF2Q9Y4G8 1499 aa17.73■□□□□ 0.43
PTPRVP-205ENST00000641549 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
PTPRVP-205ENST00000641549 POGKQ9P215 609 aa17.7■□□□□ 0.42
PTPRVP-205ENST00000641549 HDGFP51858 240 aaKnown RBP17.7■□□□□ 0.42
PTPRVP-205ENST00000641549 NUDCQ9Y266 331 aa17.69■□□□□ 0.42
PTPRVP-205ENST00000641549 TMF1P82094 1093 aa17.68■□□□□ 0.42
PTPRVP-205ENST00000641549 KANK4Q5T7N3 995 aaPredicted RBP17.66■□□□□ 0.42
PTPRVP-205ENST00000641549 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
PTPRVP-205ENST00000641549 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
PTPRVP-205ENST00000641549 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
PTPRVP-205ENST00000641549 MAPK8IP3Q9UPT6 1336 aa17.63■□□□□ 0.41
PTPRVP-205ENST00000641549 ANKRD30AQ9BXX3 1397 aa17.63■□□□□ 0.41
PTPRVP-205ENST00000641549 ZBTB7CA1YPR0 619 aa17.62■□□□□ 0.41
PTPRVP-205ENST00000641549 RSPH4AQ5TD94 716 aa17.61■□□□□ 0.41
PTPRVP-205ENST00000641549 PNNQ9H307 717 aaKnown RBP17.61■□□□□ 0.41
PTPRVP-205ENST00000641549 IRX6P78412 446 aaPredicted RBP17.61■□□□□ 0.41
PTPRVP-205ENST00000641549 EIF5BO60841 1220 aaKnown RBP17.6■□□□□ 0.41
PTPRVP-205ENST00000641549 PKD2Q13563 968 aa17.6■□□□□ 0.41
PTPRVP-205ENST00000641549 CCDC18Q5T9S5 1454 aa17.58■□□□□ 0.4
PTPRVP-205ENST00000641549 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
PTPRVP-205ENST00000641549 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
PTPRVP-205ENST00000641549 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 CCER2I3L3R5 266 aa17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 DDRGK1Q96HY6 314 aa17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 RAB3GAP2Q9H2M9 1393 aa17.56■□□□□ 0.4
PTPRVP-205ENST00000641549 MS4A1P11836 297 aa17.54■□□□□ 0.4
PTPRVP-205ENST00000641549 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
PTPRVP-205ENST00000641549 BECN1Q14457 450 aa17.54■□□□□ 0.4
PTPRVP-205ENST00000641549 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
PTPRVP-205ENST00000641549 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
PTPRVP-205ENST00000641549 NUP155O75694 1391 aa17.53■□□□□ 0.4
PTPRVP-205ENST00000641549 GGT6Q6P531 493 aa17.51■□□□□ 0.39
PTPRVP-205ENST00000641549 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
PTPRVP-205ENST00000641549 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
PTPRVP-205ENST00000641549 JPH4Q96JJ6 628 aa17.51■□□□□ 0.39
PTPRVP-205ENST00000641549 HSPA5P11021 654 aaKnown RBP17.5■□□□□ 0.39
PTPRVP-205ENST00000641549 A0A0G2JS52 829 aa17.5■□□□□ 0.39
PTPRVP-205ENST00000641549 PPP4R2Q9NY27 417 aa17.48■□□□□ 0.39
PTPRVP-205ENST00000641549 PLEKHG5O94827 1062 aa17.48■□□□□ 0.39
PTPRVP-205ENST00000641549 NEUROD2Q15784 382 aa17.48■□□□□ 0.39
PTPRVP-205ENST00000641549 SRPK2P78362 688 aaKnown RBP17.47■□□□□ 0.39
PTPRVP-205ENST00000641549 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
PTPRVP-205ENST00000641549 MLECQ14165 292 aa17.45■□□□□ 0.38
PTPRVP-205ENST00000641549 CASC1Q6TDU7 716 aa17.45■□□□□ 0.38
PTPRVP-205ENST00000641549 U2SURPO15042 1029 aaKnown RBP17.45■□□□□ 0.38
PTPRVP-205ENST00000641549 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
PTPRVP-205ENST00000641549 KTN1Q86UP2 1357 aaKnown RBP17.44■□□□□ 0.38
PTPRVP-205ENST00000641549 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
PTPRVP-205ENST00000641549 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
PTPRVP-205ENST00000641549 ROCK2O75116 1388 aaKnown RBP17.43■□□□□ 0.38
PTPRVP-205ENST00000641549 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms