RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, human

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LPP-222	ENST00000640853	IRX6	P78412	446 aa	Predicted RBP	4.08	□□□□□ -1.76
LPP-222	ENST00000640853	CHMP7	Q8WUX9	453 aa	Predicted RBP	4.08	□□□□□ -1.76
LPP-222	ENST00000640853	DDRGK1	Q96HY6	314 aa		4.08	□□□□□ -1.76
LPP-222	ENST00000640853	PPP4R2	Q9NY27	417 aa		4.08	□□□□□ -1.76
LPP-222	ENST00000640853	CHIC2	Q9UKJ5	165 aa		4.08	□□□□□ -1.76
LPP-222	ENST00000640853	CHMP4A	Q9BY43	222 aa		4.08	□□□□□ -1.76
LPP-222	ENST00000640853	FAM9B	Q8IZU0	186 aa		4.07	□□□□□ -1.76
LPP-222	ENST00000640853	KCNH8	Q96L42	1107 aa		4.07	□□□□□ -1.76
LPP-222	ENST00000640853	NBR1	Q14596	966 aa		4.07	□□□□□ -1.76
LPP-222	ENST00000640853	NPM1	P06748	294 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
LPP-222	ENST00000640853	GLIPR1L2	Q4G1C9	344 aa		4.06	□□□□□ -1.76
LPP-222	ENST00000640853	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.06	□□□□□ -1.76
LPP-222	ENST00000640853	TNIK	Q9UKE5	1360 aa		4.06	□□□□□ -1.76
LPP-222	ENST00000640853	HSP90AA1	P07900	732 aa	Known RBP	4.05	□□□□□ -1.76
LPP-222	ENST00000640853	BECN1	Q14457	450 aa		4.05	□□□□□ -1.76
LPP-222	ENST00000640853	DHX37	Q8IY37	1157 aa	Known RBP	4.05	□□□□□ -1.76
LPP-222	ENST00000640853	DEK	P35659	375 aa	Known RBP	4.05	□□□□□ -1.76
LPP-222	ENST00000640853	PHF23	Q9BUL5	403 aa	Predicted RBP	4.05	□□□□□ -1.76
LPP-222	ENST00000640853	CCER2	I3L3R5	266 aa		4.05	□□□□□ -1.76
LPP-222	ENST00000640853	MRS2	Q9HD23	443 aa		4.05	□□□□□ -1.76
LPP-222	ENST00000640853	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
LPP-222	ENST00000640853	CHGA	P10645	457 aa	Known RBP	4.05	□□□□□ -1.76
LPP-222	ENST00000640853	ERICH6B	Q5W0A0	696 aa		4.04	□□□□□ -1.76
LPP-222	ENST00000640853	CECR2	Q9BXF3	1484 aa		4.04	□□□□□ -1.76
LPP-222	ENST00000640853	CDK11B	P21127	795 aa	Known RBP	4.04	□□□□□ -1.76
LPP-222	ENST00000640853	SENP3	Q9H4L4	574 aa	Predicted RBP	4.04	□□□□□ -1.76
LPP-222	ENST00000640853	PDIA4	P13667	645 aa	Known RBP	4.04	□□□□□ -1.76
LPP-222	ENST00000640853	PDE4C	Q08493	712 aa		4.04	□□□□□ -1.76
LPP-222	ENST00000640853	CLIP1	P30622	1438 aa		4.03	□□□□□ -1.76
LPP-222	ENST00000640853	NOP58	Q9Y2X3	529 aa	Known RBP	4.03	□□□□□ -1.76
LPP-222	ENST00000640853	PPM1G	O15355	546 aa	Predicted RBP	4.03	□□□□□ -1.76
LPP-222	ENST00000640853	B4GALNT3	Q6L9W6	998 aa		4.03	□□□□□ -1.76
LPP-222	ENST00000640853	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	4.03	□□□□□ -1.76	5e-7	■□□□□ 9.5
LPP-222	ENST00000640853	WDR43	Q15061	677 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
LPP-222	ENST00000640853	SIN3A	Q96ST3	1273 aa		4.02	□□□□□ -1.77
LPP-222	ENST00000640853	KANK4	Q5T7N3	995 aa	Predicted RBP	4.02	□□□□□ -1.77
LPP-222	ENST00000640853	TSPY4	P0CV99	314 aa		4.02	□□□□□ -1.77
LPP-222	ENST00000640853	TSPY10	P0CW01	314 aa		4.02	□□□□□ -1.77
LPP-222	ENST00000640853	CDCA8	Q53HL2	280 aa		4.02	□□□□□ -1.77
LPP-222	ENST00000640853	SALL2	Q9Y467	1007 aa	Predicted RBP	4.01	□□□□□ -1.77
LPP-222	ENST00000640853	TMEM132A	Q24JP5	1023 aa		4.01	□□□□□ -1.77
LPP-222	ENST00000640853	TONSL	Q96HA7	1378 aa		4.01	□□□□□ -1.77
LPP-222	ENST00000640853	CEP162	Q5TB80	1403 aa		4.01	□□□□□ -1.77
LPP-222	ENST00000640853	TNNT2	P45379	298 aa	Predicted RBP	4.01	□□□□□ -1.77
LPP-222	ENST00000640853	KDM2A	Q9Y2K7	1162 aa		4	□□□□□ -1.77
LPP-222	ENST00000640853	DCAF8L1	A6NGE4	600 aa		4	□□□□□ -1.77
LPP-222	ENST00000640853	PPP1R15A	O75807	674 aa	Predicted RBP	4	□□□□□ -1.77
LPP-222	ENST00000640853	CCDC180	Q9P1Z9	1646 aa		4	□□□□□ -1.77
LPP-222	ENST00000640853	ANO8	Q9HCE9	1232 aa	Predicted RBP	4	□□□□□ -1.77
LPP-222	ENST00000640853	UBE2Q2	Q8WVN8	375 aa		4	□□□□□ -1.77
LPP-222	ENST00000640853	RRP7BP	Q9NSQ0	103 aa		3.99	□□□□□ -1.77
LPP-222	ENST00000640853	FANCI	Q9NVI1	1328 aa		3.99	□□□□□ -1.77
LPP-222	ENST00000640853	NCL	P19338	710 aa	Known RBP	3.99	□□□□□ -1.77
LPP-222	ENST00000640853	GOLGA6L22	H0YM25	854 aa		3.99	□□□□□ -1.77
LPP-222	ENST00000640853	EEA1	Q15075	1411 aa		3.98	□□□□□ -1.77
LPP-222	ENST00000640853	MYH16	Q9H6N6	1097 aa		3.98	□□□□□ -1.77
LPP-222	ENST00000640853	KNSTRN	Q9Y448	316 aa		3.98	□□□□□ -1.77
LPP-222	ENST00000640853	CHMP4B	Q9H444	224 aa	Known RBP	3.98	□□□□□ -1.77
LPP-222	ENST00000640853	LMOD2	Q6P5Q4	547 aa		3.98	□□□□□ -1.77
LPP-222	ENST00000640853	PLEKHD1	A6NEE1	506 aa		3.97	□□□□□ -1.77
LPP-222	ENST00000640853	STAG3	Q9UJ98	1225 aa		3.97	□□□□□ -1.77
LPP-222	ENST00000640853	LAS1L	Q9Y4W2	734 aa	Known RBP	3.97	□□□□□ -1.77
LPP-222	ENST00000640853	TRIM44	Q96DX7	344 aa	Predicted RBP	3.97	□□□□□ -1.77
LPP-222	ENST00000640853	DNAJC5B	Q9UF47	199 aa		3.97	□□□□□ -1.77
LPP-222	ENST00000640853	TDRD9	Q8NDG6	1382 aa	Known RBP	3.97	□□□□□ -1.77
LPP-222	ENST00000640853	TRH	P20396	242 aa	Predicted RBP	3.97	□□□□□ -1.77
LPP-222	ENST00000640853	ZBTB22	O15209	634 aa		3.96	□□□□□ -1.78
LPP-222	ENST00000640853	PNN	Q9H307	717 aa	Known RBP	3.96	□□□□□ -1.78
LPP-222	ENST00000640853	MS4A1	P11836	297 aa		3.96	□□□□□ -1.78
LPP-222	ENST00000640853	L1TD1	Q5T7N2	865 aa	Known RBP	3.96	□□□□□ -1.78
LPP-222	ENST00000640853	CCNB3	Q8WWL7	1395 aa		3.96	□□□□□ -1.78
LPP-222	ENST00000640853	CASC1	Q6TDU7	716 aa		3.96	□□□□□ -1.78
LPP-222	ENST00000640853	BCL11B	Q9C0K0	894 aa	Predicted RBP	3.95	□□□□□ -1.78
LPP-222	ENST00000640853	ESF1	Q9H501	851 aa	Known RBP	3.95	□□□□□ -1.78
LPP-222	ENST00000640853	CARD11	Q9BXL7	1154 aa		3.95	□□□□□ -1.78
LPP-222	ENST00000640853	TCERG1	O14776	1098 aa	Known RBP	3.95	□□□□□ -1.78
LPP-222	ENST00000640853	SOGA1	O94964	1423 aa		3.95	□□□□□ -1.78
LPP-222	ENST00000640853	SAMD1	Q6SPF0	538 aa	Predicted RBP	3.95	□□□□□ -1.78
LPP-222	ENST00000640853	NUDC	Q9Y266	331 aa		3.95	□□□□□ -1.78
LPP-222	ENST00000640853	SENP3-EIF4A1	A0A087X0R7	540 aa		3.95	□□□□□ -1.78
LPP-222	ENST00000640853	RGL3	Q3MIN7	710 aa		3.94	□□□□□ -1.78
LPP-222	ENST00000640853	CFAP53	Q96M91	514 aa		3.94	□□□□□ -1.78
LPP-222	ENST00000640853	WRN	Q14191	1432 aa	Predicted RBP eCLIP	3.94	□□□□□ -1.78
LPP-222	ENST00000640853	RALBP1	Q15311	655 aa		3.94	□□□□□ -1.78
LPP-222	ENST00000640853	IPO9	Q96P70	1041 aa	Known RBP	3.94	□□□□□ -1.78
LPP-222	ENST00000640853	HSPA5	P11021	654 aa	Known RBP	3.94	□□□□□ -1.78
LPP-222	ENST00000640853	RB1CC1	Q8TDY2	1594 aa		3.94	□□□□□ -1.78
LPP-222	ENST00000640853	RCAN3	Q9UKA8	241 aa		3.94	□□□□□ -1.78
LPP-222	ENST00000640853	CFAP44	Q96MT7	982 aa		3.94	□□□□□ -1.78
LPP-222	ENST00000640853	FTSJ3	Q8IY81	847 aa	Known RBP	3.93	□□□□□ -1.78
LPP-222	ENST00000640853	CFDP1	Q9UEE9	299 aa	Predicted RBP	3.93	□□□□□ -1.78
LPP-222	ENST00000640853	MLEC	Q14165	292 aa		3.93	□□□□□ -1.78
LPP-222	ENST00000640853	BAZ1B	Q9UIG0	1483 aa	Known RBP	3.92	□□□□□ -1.78
LPP-222	ENST00000640853	PTMA	P06454	111 aa	Known RBP	3.92	□□□□□ -1.78
LPP-222	ENST00000640853	MTUS2	Q5JR59	1369 aa		3.92	□□□□□ -1.78
LPP-222	ENST00000640853	IPO8	O15397	1037 aa	Known RBP	3.92	□□□□□ -1.78
LPP-222	ENST00000640853	SETD5	Q9C0A6	1442 aa		3.92	□□□□□ -1.78
LPP-222	ENST00000640853	L3MBTL2	Q969R5	705 aa		3.92	□□□□□ -1.78
LPP-222	ENST00000640853	USP35	Q9P2H5	1018 aa		3.92	□□□□□ -1.78
LPP-222	ENST00000640853	IGSF3	O75054	1194 aa		3.92	□□□□□ -1.78

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