RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 FKBP8Q14318 412 aa14.08□□□□□ -0.16
AP3S1-209ENST00000640413 PLCD3Q8N3E9 789 aa14.07□□□□□ -0.16
AP3S1-209ENST00000640413 RASEFQ8IZ41 740 aa14.06□□□□□ -0.16
AP3S1-209ENST00000640413 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
AP3S1-209ENST00000640413 ASTLQ6HA08 431 aaPredicted RBP14.05□□□□□ -0.16
AP3S1-209ENST00000640413 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
AP3S1-209ENST00000640413 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
AP3S1-209ENST00000640413 METRNQ9UJH8 293 aa13.99□□□□□ -0.17
AP3S1-209ENST00000640413 MAP3K13O43283 966 aa13.98□□□□□ -0.17
AP3S1-209ENST00000640413 TRPC6Q9Y210 931 aa13.98□□□□□ -0.17
AP3S1-209ENST00000640413 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
AP3S1-209ENST00000640413 SLC39A7Q92504 469 aa13.95□□□□□ -0.18
AP3S1-209ENST00000640413 C7P10643 843 aa13.94□□□□□ -0.18
AP3S1-209ENST00000640413 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
AP3S1-209ENST00000640413 NUBP1P53384 320 aa13.91□□□□□ -0.18
AP3S1-209ENST00000640413 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
AP3S1-209ENST00000640413 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
AP3S1-209ENST00000640413 TIE1P35590 1138 aa13.84□□□□□ -0.19
AP3S1-209ENST00000640413 PCDHB13Q9Y5F0 798 aa13.82□□□□□ -0.2
AP3S1-209ENST00000640413 POTEFA5A3E0 1075 aa13.8□□□□□ -0.2
AP3S1-209ENST00000640413 TTLL13PA6NNM8 815 aa13.8□□□□□ -0.2
AP3S1-209ENST00000640413 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
AP3S1-209ENST00000640413 SGIP1Q9BQI5 828 aa13.76□□□□□ -0.21
AP3S1-209ENST00000640413 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
AP3S1-209ENST00000640413 MAMSTRQ6ZN01 415 aa13.74□□□□□ -0.21
AP3S1-209ENST00000640413 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
AP3S1-209ENST00000640413 TRIM35Q9UPQ4 493 aa13.72□□□□□ -0.21
AP3S1-209ENST00000640413 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
AP3S1-209ENST00000640413 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
AP3S1-209ENST00000640413 SEC24BO95487 1268 aa13.69□□□□□ -0.22
AP3S1-209ENST00000640413 SCUBE2Q9NQ36 999 aa13.68□□□□□ -0.22
AP3S1-209ENST00000640413 POTEMA6NI47 508 aa13.66□□□□□ -0.22
AP3S1-209ENST00000640413 PYGBP11216 843 aa13.66□□□□□ -0.22
AP3S1-209ENST00000640413 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
AP3S1-209ENST00000640413 PLSCR2Q9NRY7 297 aa13.65□□□□□ -0.22
AP3S1-209ENST00000640413 POTEGQ6S5H5 508 aa13.64□□□□□ -0.23
AP3S1-209ENST00000640413 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
AP3S1-209ENST00000640413 IER5LQ5T953 404 aa13.61□□□□□ -0.23
AP3S1-209ENST00000640413 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
AP3S1-209ENST00000640413 FAM163AQ96GL9 167 aaPredicted RBP13.58□□□□□ -0.24
AP3S1-209ENST00000640413 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
AP3S1-209ENST00000640413 LCE2DQ5TA82 110 aaPredicted RBP13.55□□□□□ -0.24
AP3S1-209ENST00000640413 PLCG2P16885 1265 aa13.5□□□□□ -0.25
AP3S1-209ENST00000640413 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
AP3S1-209ENST00000640413 GSE1Q14687 1217 aa13.48□□□□□ -0.25
AP3S1-209ENST00000640413 SLAIN1Q8ND83 568 aa13.43□□□□□ -0.26
AP3S1-209ENST00000640413 OCEL1Q9H607 264 aa13.42□□□□□ -0.26
AP3S1-209ENST00000640413 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
AP3S1-209ENST00000640413 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
AP3S1-209ENST00000640413 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
AP3S1-209ENST00000640413 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
AP3S1-209ENST00000640413 SPOCK2Q92563 424 aa13.34□□□□□ -0.27
AP3S1-209ENST00000640413 PSEN1P49768 467 aa13.32□□□□□ -0.28
AP3S1-209ENST00000640413 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
AP3S1-209ENST00000640413 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
AP3S1-209ENST00000640413 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
AP3S1-209ENST00000640413 ST18O60284 1047 aa13.28□□□□□ -0.28
AP3S1-209ENST00000640413 PDCD7Q8N8D1 485 aaKnown RBP13.28□□□□□ -0.28
AP3S1-209ENST00000640413 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.29
AP3S1-209ENST00000640413 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
AP3S1-209ENST00000640413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.29
AP3S1-209ENST00000640413 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
AP3S1-209ENST00000640413 L3MBTL3Q96JM7 780 aaPredicted RBP13.18□□□□□ -0.3
AP3S1-209ENST00000640413 CABP2Q9NPB3 220 aa13.18□□□□□ -0.3
AP3S1-209ENST00000640413 C3orf67Q6ZVT6 689 aa13.16□□□□□ -0.3
AP3S1-209ENST00000640413 DPY19L2Q6NUT2 758 aa13.15□□□□□ -0.3
AP3S1-209ENST00000640413 SNPHO15079 494 aa13.13□□□□□ -0.31
AP3S1-209ENST00000640413 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
AP3S1-209ENST00000640413 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
AP3S1-209ENST00000640413 TMEM121BQ9BXQ6 578 aaPredicted RBP13.08□□□□□ -0.32
AP3S1-209ENST00000640413 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
AP3S1-209ENST00000640413 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.33
AP3S1-209ENST00000640413 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
AP3S1-209ENST00000640413 G3V3G9 751 aa13□□□□□ -0.33
AP3S1-209ENST00000640413 EMP3P54852 163 aa12.95□□□□□ -0.34
AP3S1-209ENST00000640413 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
AP3S1-209ENST00000640413 RIOK3O14730 519 aaKnown RBP12.93□□□□□ -0.34
AP3S1-209ENST00000640413 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
AP3S1-209ENST00000640413 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
AP3S1-209ENST00000640413 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
AP3S1-209ENST00000640413 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
AP3S1-209ENST00000640413 FAM205CA6NFA0 338 aa12.89□□□□□ -0.35
AP3S1-209ENST00000640413 SPNS2Q8IVW8 549 aa12.89□□□□□ -0.35
AP3S1-209ENST00000640413 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
AP3S1-209ENST00000640413 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
AP3S1-209ENST00000640413 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
AP3S1-209ENST00000640413 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
AP3S1-209ENST00000640413 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
AP3S1-209ENST00000640413 SOX12O15370 315 aa12.83□□□□□ -0.36
AP3S1-209ENST00000640413 MICALL2Q8IY33 904 aa12.83□□□□□ -0.36
AP3S1-209ENST00000640413 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
AP3S1-209ENST00000640413 TMEM92Q6UXU6 159 aa12.81□□□□□ -0.36
AP3S1-209ENST00000640413 ZNF710Q8N1W2 664 aa12.81□□□□□ -0.36
AP3S1-209ENST00000640413 KRTAP3-3Q9BYR6 98 aa12.79□□□□□ -0.36
AP3S1-209ENST00000640413 KRTAP3-2Q9BYR7 98 aa12.79□□□□□ -0.36
AP3S1-209ENST00000640413 HOXB1P14653 301 aaPredicted RBP12.78□□□□□ -0.36
AP3S1-209ENST00000640413 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
AP3S1-209ENST00000640413 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
AP3S1-209ENST00000640413 ERBB3P21860 1342 aa12.71□□□□□ -0.37
AP3S1-209ENST00000640413 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms