RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ARAP1Q96P48 1450 aa7.15□□□□□ -1.26
GABRA1-220ENST00000638159 PTPRGP23470 1445 aa7.14□□□□□ -1.27
GABRA1-220ENST00000638159 CDK11AQ9UQ88 783 aaPredicted RBP7.14□□□□□ -1.27
GABRA1-220ENST00000638159 A0A0G2JS52 829 aa7.13□□□□□ -1.27
GABRA1-220ENST00000638159 MYT1Q01538 1121 aa7.13□□□□□ -1.27
GABRA1-220ENST00000638159 TEX14Q8IWB6 1497 aa7.13□□□□□ -1.27
GABRA1-220ENST00000638159 GRIN2BQ13224 1484 aa7.12□□□□□ -1.27
GABRA1-220ENST00000638159 NUTM2BA6NNL0 878 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-220ENST00000638159 NUTM2EB1AL46 878 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-220ENST00000638159 NUTM2DQ5VT03 806 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-220ENST00000638159 NUTM2AQ8IVF1 878 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-220ENST00000638159 WDR62O43379 1518 aa7.1□□□□□ -1.27
GABRA1-220ENST00000638159 PLEKHD1A6NEE1 506 aa7.1□□□□□ -1.27
GABRA1-220ENST00000638159 PRG4Q92954 1404 aaPredicted RBP7.09□□□□□ -1.27
GABRA1-220ENST00000638159 ZRANB1Q9UGI0 708 aa7.09□□□□□ -1.27
GABRA1-220ENST00000638159 ERCC6L2Q5T890 1561 aa7.09□□□□□ -1.27
GABRA1-220ENST00000638159 SNAPC4Q5SXM2 1469 aa7.09□□□□□ -1.28
GABRA1-220ENST00000638159 HAP1P54257 671 aaPredicted RBP7.08□□□□□ -1.28
GABRA1-220ENST00000638159 KDM6BO15054 1643 aa7.07□□□□□ -1.28
GABRA1-220ENST00000638159 MROH2BQ7Z745 1585 aa7.07□□□□□ -1.28
GABRA1-220ENST00000638159 ILDR2Q71H61 639 aa7.06□□□□□ -1.28
GABRA1-220ENST00000638159 ZNF608Q9ULD9 1512 aaPredicted RBP7.06□□□□□ -1.28
GABRA1-220ENST00000638159 ADGRL1O94910 1474 aa7.06□□□□□ -1.28
GABRA1-220ENST00000638159 THOC2Q8NI27 1593 aaKnown RBP7.05□□□□□ -1.28
GABRA1-220ENST00000638159 SMARCA4P51532 1647 aa7.05□□□□□ -1.28
GABRA1-220ENST00000638159 MAGI1Q96QZ7 1491 aaPredicted RBP7.05□□□□□ -1.28
GABRA1-220ENST00000638159 PPP1R1BQ9UD71 204 aaPredicted RBP7.04□□□□□ -1.28
GABRA1-220ENST00000638159 PLB1Q6P1J6 1458 aa7.03□□□□□ -1.28
GABRA1-220ENST00000638159 PPP6R1Q9UPN7 881 aa7.03□□□□□ -1.28
GABRA1-220ENST00000638159 TRIM52Q96A61 297 aa7.02□□□□□ -1.29
GABRA1-220ENST00000638159 CFTRP13569 1480 aa7.01□□□□□ -1.29
GABRA1-220ENST00000638159 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
GABRA1-220ENST00000638159 TOP2BQ02880 1626 aa7.01□□□□□ -1.29
GABRA1-220ENST00000638159 RBM33Q96EV2 1170 aaKnown RBP7□□□□□ -1.29
GABRA1-220ENST00000638159 PPP1R15AO75807 674 aaPredicted RBP6.99□□□□□ -1.29
GABRA1-220ENST00000638159 TOPBP1Q92547 1522 aa6.99□□□□□ -1.29
GABRA1-220ENST00000638159 P3H3Q8IVL6 736 aa6.98□□□□□ -1.29
GABRA1-220ENST00000638159 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
GABRA1-220ENST00000638159 CCDC9Q9Y3X0 531 aaKnown RBP6.98□□□□□ -1.29
GABRA1-220ENST00000638159 EID1Q9Y6B2 187 aa6.98□□□□□ -1.29
GABRA1-220ENST00000638159 URB2Q14146 1524 aaKnown RBP6.97□□□□□ -1.29
GABRA1-220ENST00000638159 ADRA2BP18089 450 aa6.97□□□□□ -1.29
GABRA1-220ENST00000638159 NGLY1Q96IV0 654 aa6.97□□□□□ -1.29
GABRA1-220ENST00000638159 TNIKQ9UKE5 1360 aa6.96□□□□□ -1.29
GABRA1-220ENST00000638159 CD109Q6YHK3 1445 aa6.96□□□□□ -1.29
GABRA1-220ENST00000638159 EFCAB2Q5VUJ9 269 aa6.96□□□□□ -1.29
GABRA1-220ENST00000638159 KIF21AQ7Z4S6 1674 aa6.96□□□□□ -1.3
GABRA1-220ENST00000638159 UHRF1BP1Q6BDS2 1440 aa6.96□□□□□ -1.3
GABRA1-220ENST00000638159 RAD54L2Q9Y4B4 1467 aa6.96□□□□□ -1.3
GABRA1-220ENST00000638159 ABCC10Q5T3U5 1492 aa6.95□□□□□ -1.3
GABRA1-220ENST00000638159 ZNF772Q68DY9 489 aaPredicted RBP6.95□□□□□ -1.3
GABRA1-220ENST00000638159 FHAD1B1AJZ9 1412 aa6.95□□□□□ -1.3
GABRA1-220ENST00000638159 HDGFP51858 240 aaKnown RBP6.94□□□□□ -1.3
GABRA1-220ENST00000638159 ANKLE2Q86XL3 938 aa6.94□□□□□ -1.3
GABRA1-220ENST00000638159 AKNAQ7Z591 1439 aa6.94□□□□□ -1.3
GABRA1-220ENST00000638159 RAPGEF3O95398 923 aa6.93□□□□□ -1.3
GABRA1-220ENST00000638159 PHLDB1Q86UU1 1377 aa6.93□□□□□ -1.3
GABRA1-220ENST00000638159 PKD2Q13563 968 aa6.93□□□□□ -1.3
GABRA1-220ENST00000638159 APLP2Q06481 763 aa6.92□□□□□ -1.3
GABRA1-220ENST00000638159 GGT6Q6P531 493 aa6.92□□□□□ -1.3
GABRA1-220ENST00000638159 SENP3-EIF4A1A0A087X0R7 540 aa6.91□□□□□ -1.3
GABRA1-220ENST00000638159 UBTFP17480 764 aaKnown RBP6.91□□□□□ -1.3
GABRA1-220ENST00000638159 HECW2Q9P2P5 1572 aa6.91□□□□□ -1.3
GABRA1-220ENST00000638159 HSPA1LP34931 641 aa6.91□□□□□ -1.3
GABRA1-220ENST00000638159 RXRBP28702 533 aa6.91□□□□□ -1.3
GABRA1-220ENST00000638159 THEMISQ8N1K5 641 aaPredicted RBP6.9□□□□□ -1.3
GABRA1-220ENST00000638159 CEBPAP49715 358 aaPredicted RBP6.89□□□□□ -1.31
GABRA1-220ENST00000638159 POLA1P09884 1462 aaPredicted RBP6.89□□□□□ -1.31
GABRA1-220ENST00000638159 YEATS2Q9ULM3 1422 aa6.89□□□□□ -1.31
GABRA1-220ENST00000638159 FGD5Q6ZNL6 1462 aa6.89□□□□□ -1.31
GABRA1-220ENST00000638159 DNMBPQ6XZF7 1577 aa6.88□□□□□ -1.31
GABRA1-220ENST00000638159 ASXL2Q76L83 1435 aa6.88□□□□□ -1.31
GABRA1-220ENST00000638159 SPATA31D1Q6ZQQ2 1576 aa6.88□□□□□ -1.31
GABRA1-220ENST00000638159 CHGAP10645 457 aaKnown RBP6.88□□□□□ -1.31
GABRA1-220ENST00000638159 ATF3P18847 181 aa6.87□□□□□ -1.31
GABRA1-220ENST00000638159 PROSER2Q86WR7 435 aaPredicted RBP6.87□□□□□ -1.31
GABRA1-220ENST00000638159 YY1P25490 414 aa6.86□□□□□ -1.31
GABRA1-220ENST00000638159 GRIN2AQ12879 1464 aa6.86□□□□□ -1.31
GABRA1-220ENST00000638159 KIF27Q86VH2 1401 aa6.86□□□□□ -1.31
GABRA1-220ENST00000638159 EIF4G3O43432 1585 aaKnown RBP6.85□□□□□ -1.31
GABRA1-220ENST00000638159 FANCAO15360 1455 aa6.85□□□□□ -1.31
GABRA1-220ENST00000638159 UACAQ9BZF9 1416 aa6.84□□□□□ -1.31
GABRA1-220ENST00000638159 TOP2AP11388 1531 aaKnown RBP6.84□□□□□ -1.31
GABRA1-220ENST00000638159 KLHL34Q8N239 644 aa6.84□□□□□ -1.31
GABRA1-220ENST00000638159 BIVM-ERCC5R4GMW8 1640 aa6.83□□□□□ -1.32
GABRA1-220ENST00000638159 PELP1Q8IZL8 1130 aaKnown RBP6.83□□□□□ -1.32
GABRA1-220ENST00000638159 BAG6P46379 1132 aa6.82□□□□□ -1.32
GABRA1-220ENST00000638159 PLEKHG5O94827 1062 aa6.82□□□□□ -1.32
GABRA1-220ENST00000638159 NBPF8Q3BBV2 869 aa6.82□□□□□ -1.32
GABRA1-220ENST00000638159 NBPF14Q5TI25 921 aa6.82□□□□□ -1.32
GABRA1-220ENST00000638159 PTPRKQ15262 1439 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 NCKAP5LQ9HCH0 1330 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 CARMIL1Q5VZK9 1371 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 LMOD2Q6P5Q4 547 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 WDR97A6NE52 1622 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 TSPY4P0CV99 314 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 TSPY10P0CW01 314 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 KCNA4P22459 653 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 PTPRMP28827 1452 aa6.8□□□□□ -1.32
GABRA1-220ENST00000638159 DENND4BO75064 1496 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms