RNA–Protein interactions for RNA: ENST00000637886.1

UBE3A-226, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-226ENST00000637886 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
UBE3A-226ENST00000637886 EIF4G2P78344 907 aaKnown RBP eCLIP16.98■□□□□ 0.31
UBE3A-226ENST00000637886 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
UBE3A-226ENST00000637886 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.3
UBE3A-226ENST00000637886 FGD1P98174 961 aa16.94■□□□□ 0.3
UBE3A-226ENST00000637886 TMX4Q9H1E5 349 aaPredicted RBP16.94■□□□□ 0.3
UBE3A-226ENST00000637886 CCDC136Q96JN2 1154 aa16.94■□□□□ 0.3
UBE3A-226ENST00000637886 GTF3C3Q9Y5Q9 886 aa16.94■□□□□ 0.3
UBE3A-226ENST00000637886 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
UBE3A-226ENST00000637886 P3H3Q8IVL6 736 aa16.93■□□□□ 0.3
UBE3A-226ENST00000637886 TAOK2Q9UL54 1235 aa16.92■□□□□ 0.3
UBE3A-226ENST00000637886 CHAF1AQ13111 956 aaPredicted RBP16.89■□□□□ 0.29
UBE3A-226ENST00000637886 NOC3LQ8WTT2 800 aaKnown RBP16.89■□□□□ 0.29
UBE3A-226ENST00000637886 FAM9BQ8IZU0 186 aa16.88■□□□□ 0.29
UBE3A-226ENST00000637886 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
UBE3A-226ENST00000637886 NBR1Q14596 966 aa16.88■□□□□ 0.29
UBE3A-226ENST00000637886 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
UBE3A-226ENST00000637886 DDRGK1Q96HY6 314 aa16.86■□□□□ 0.29
UBE3A-226ENST00000637886 NAP1L2Q9ULW6 460 aaPredicted RBP16.86■□□□□ 0.29
UBE3A-226ENST00000637886 HNRNPUQ00839 825 aaKnown RBP eCLIP16.86■□□□□ 0.29
UBE3A-226ENST00000637886 LMOD2Q6P5Q4 547 aa16.85■□□□□ 0.29
UBE3A-226ENST00000637886 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
UBE3A-226ENST00000637886 KCNJ4P48050 445 aa16.82■□□□□ 0.28
UBE3A-226ENST00000637886 FTSJ3Q8IY81 847 aaKnown RBP16.82■□□□□ 0.28
UBE3A-226ENST00000637886 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
UBE3A-226ENST00000637886 CFAP53Q96M91 514 aa16.81■□□□□ 0.28
UBE3A-226ENST00000637886 TSPY4P0CV99 314 aa16.79■□□□□ 0.28
UBE3A-226ENST00000637886 TSPY10P0CW01 314 aa16.79■□□□□ 0.28
UBE3A-226ENST00000637886 FKBP8Q14318 412 aa16.77■□□□□ 0.28
UBE3A-226ENST00000637886 GNL2Q13823 731 aaKnown RBP16.77■□□□□ 0.27
UBE3A-226ENST00000637886 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
UBE3A-226ENST00000637886 PLCB2Q00722 1185 aa16.75■□□□□ 0.27
UBE3A-226ENST00000637886 CHMP4BQ9H444 224 aaKnown RBP16.75■□□□□ 0.27
UBE3A-226ENST00000637886 KDM2AQ9Y2K7 1162 aa16.75■□□□□ 0.27
UBE3A-226ENST00000637886 GOLGA6L4A6NEF3 574 aa16.74■□□□□ 0.27
UBE3A-226ENST00000637886 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
UBE3A-226ENST00000637886 ABCC9O60706 1549 aa16.73■□□□□ 0.27
UBE3A-226ENST00000637886 A0A0U1RQG5 324 aaPredicted RBP16.69■□□□□ 0.26
UBE3A-226ENST00000637886 LAS1LQ9Y4W2 734 aaKnown RBP16.67■□□□□ 0.26
UBE3A-226ENST00000637886 G3V3G9 751 aa16.67■□□□□ 0.26
UBE3A-226ENST00000637886 DCAF8Q5TAQ9 597 aa16.67■□□□□ 0.26
UBE3A-226ENST00000637886 MAPK8IP3Q9UPT6 1336 aa16.67■□□□□ 0.26
UBE3A-226ENST00000637886 CDCA8Q53HL2 280 aa16.66■□□□□ 0.26
UBE3A-226ENST00000637886 DRC7Q8IY82 874 aa16.65■□□□□ 0.26
UBE3A-226ENST00000637886 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
UBE3A-226ENST00000637886 CEP89Q96ST8 783 aa16.62■□□□□ 0.25
UBE3A-226ENST00000637886 MCCP23508 829 aa16.62■□□□□ 0.25
UBE3A-226ENST00000637886 USP35Q9P2H5 1018 aa16.61■□□□□ 0.25
UBE3A-226ENST00000637886 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
UBE3A-226ENST00000637886 HSP90AB1P08238 724 aaKnown RBP16.6■□□□□ 0.25
UBE3A-226ENST00000637886 MRS2Q9HD23 443 aa16.6■□□□□ 0.25
UBE3A-226ENST00000637886 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
UBE3A-226ENST00000637886 KNSTRNQ9Y448 316 aa16.58■□□□□ 0.24
UBE3A-226ENST00000637886 POGKQ9P215 609 aa16.58■□□□□ 0.24
UBE3A-226ENST00000637886 CCDC34Q96HJ3 373 aa16.58■□□□□ 0.24
UBE3A-226ENST00000637886 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
UBE3A-226ENST00000637886 DCAF8L1A6NGE4 600 aa16.55■□□□□ 0.24
UBE3A-226ENST00000637886 MS4A1P11836 297 aa16.55■□□□□ 0.24
UBE3A-226ENST00000637886 HDGFP51858 240 aaKnown RBP16.55■□□□□ 0.24
UBE3A-226ENST00000637886 ERICH6BQ5W0A0 696 aa16.55■□□□□ 0.24
UBE3A-226ENST00000637886 NAP1L5Q96NT1 182 aaPredicted RBP16.55■□□□□ 0.24
UBE3A-226ENST00000637886 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
UBE3A-226ENST00000637886 GOLGA6L1Q8N7Z2 621 aa16.53■□□□□ 0.24
UBE3A-226ENST00000637886 ACIN1Q9UKV3 1341 aaKnown RBP16.53■□□□□ 0.24
UBE3A-226ENST00000637886 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
UBE3A-226ENST00000637886 DDX10Q13206 875 aaKnown RBP16.52■□□□□ 0.23
UBE3A-226ENST00000637886 PDE4CQ08493 712 aa16.51■□□□□ 0.23
UBE3A-226ENST00000637886 TPM4P67936 248 aa16.5■□□□□ 0.23
UBE3A-226ENST00000637886 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
UBE3A-226ENST00000637886 MSNP26038 577 aaKnown RBP16.49■□□□□ 0.23
UBE3A-226ENST00000637886 MTUS2Q5JR59 1369 aa16.48■□□□□ 0.23
UBE3A-226ENST00000637886 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
UBE3A-226ENST00000637886 KIAA1211Q6ZU35 1233 aa16.48■□□□□ 0.23
UBE3A-226ENST00000637886 TCEAL9Q9UHQ7 104 aa16.47■□□□□ 0.23
UBE3A-226ENST00000637886 HTATSF1O43719 755 aaKnown RBP16.47■□□□□ 0.23
UBE3A-226ENST00000637886 CCDC9Q9Y3X0 531 aaKnown RBP16.46■□□□□ 0.23
UBE3A-226ENST00000637886 AMER1Q5JTC6 1135 aaPredicted RBP16.45■□□□□ 0.22
UBE3A-226ENST00000637886 RTF1Q92541 710 aaKnown RBP16.45■□□□□ 0.22
UBE3A-226ENST00000637886 RASSF8Q8NHQ8 419 aa16.44■□□□□ 0.22
UBE3A-226ENST00000637886 KAT6BQ8WYB5 2073 aa16.43■□□□□ 0.22
UBE3A-226ENST00000637886 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
UBE3A-226ENST00000637886 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
UBE3A-226ENST00000637886 GORABQ5T7V8 394 aa16.4■□□□□ 0.22
UBE3A-226ENST00000637886 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
UBE3A-226ENST00000637886 TAF7LQ5H9L4 462 aa16.4■□□□□ 0.22
UBE3A-226ENST00000637886 GPATCH3Q96I76 525 aa16.4■□□□□ 0.22
UBE3A-226ENST00000637886 MARCH6O60337 910 aa16.39■□□□□ 0.21
UBE3A-226ENST00000637886 CWC22Q9HCG8 908 aaKnown RBP16.38■□□□□ 0.21
UBE3A-226ENST00000637886 NEUROD2Q15784 382 aa16.37■□□□□ 0.21
UBE3A-226ENST00000637886 TNNT3P45378 269 aaPredicted RBP16.37■□□□□ 0.21
UBE3A-226ENST00000637886 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
UBE3A-226ENST00000637886 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
UBE3A-226ENST00000637886 CHMP4AQ9BY43 222 aa16.36■□□□□ 0.21
UBE3A-226ENST00000637886 CSB-PGBD3P0DP91 1061 aa16.36■□□□□ 0.21
UBE3A-226ENST00000637886 SETQ01105 290 aaPredicted RBP16.35■□□□□ 0.21
UBE3A-226ENST00000637886 PLEKHD1A6NEE1 506 aa16.35■□□□□ 0.21
UBE3A-226ENST00000637886 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
UBE3A-226ENST00000637886 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
UBE3A-226ENST00000637886 TRIM34Q9BYJ4 488 aa16.34■□□□□ 0.21
UBE3A-226ENST00000637886 KANK1Q14678 1352 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms