RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 NAP1L2Q9ULW6 460 aaPredicted RBP21.98■■□□□ 1.11
CACNA1A-238ENST00000637276 RTN4Q9NQC3 1192 aaKnown RBP21.97■■□□□ 1.11
CACNA1A-238ENST00000637276 PPM1GO15355 546 aaPredicted RBP21.95■■□□□ 1.1
CACNA1A-238ENST00000637276 DNTTIP2Q5QJE6 756 aaKnown RBP21.94■■□□□ 1.1
CACNA1A-238ENST00000637276 HNRNPUQ00839 825 aaKnown RBP eCLIP21.94■■□□□ 1.1
CACNA1A-238ENST00000637276 HIRIP3Q9BW71 556 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-238ENST00000637276 ACIN1Q9UKV3 1341 aaKnown RBP21.92■■□□□ 1.1
CACNA1A-238ENST00000637276 LAS1LQ9Y4W2 734 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-238ENST00000637276 ARID4BQ4LE39 1312 aaPredicted RBP21.88■■□□□ 1.09
CACNA1A-238ENST00000637276 ERICH6BQ5W0A0 696 aa21.88■■□□□ 1.09
CACNA1A-238ENST00000637276 PTMAP06454 111 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-238ENST00000637276 ARID3AQ99856 593 aa21.84■■□□□ 1.09
CACNA1A-238ENST00000637276 CHIC2Q9UKJ5 165 aa21.83■■□□□ 1.09
CACNA1A-238ENST00000637276 DDX10Q13206 875 aaKnown RBP21.83■■□□□ 1.09
CACNA1A-238ENST00000637276 MYH16Q9H6N6 1097 aa21.83■■□□□ 1.09
CACNA1A-238ENST00000637276 ZRSR1Q15695 479 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-238ENST00000637276 WDR43Q15061 677 aaKnown RBP eCLIP21.81■■□□□ 1.08
CACNA1A-238ENST00000637276 CCDC136Q96JN2 1154 aa21.8■■□□□ 1.08
CACNA1A-238ENST00000637276 TRIM44Q96DX7 344 aaPredicted RBP21.77■■□□□ 1.08
CACNA1A-238ENST00000637276 TMC1Q8TDI8 760 aa21.75■■□□□ 1.07
CACNA1A-238ENST00000637276 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-238ENST00000637276 SOX12O15370 315 aa21.72■■□□□ 1.07
CACNA1A-238ENST00000637276 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
CACNA1A-238ENST00000637276 NPM1P06748 294 aaKnown RBP eCLIP21.67■■□□□ 1.06
CACNA1A-238ENST00000637276 NEUROD2Q15784 382 aa21.66■■□□□ 1.06
CACNA1A-238ENST00000637276 GOLGA2Q08379 1002 aa21.65■■□□□ 1.06
CACNA1A-238ENST00000637276 SPRYD3Q8NCJ5 442 aa21.64■■□□□ 1.06
CACNA1A-238ENST00000637276 NAP1L5Q96NT1 182 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-238ENST00000637276 TNNT2P45379 298 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-238ENST00000637276 WWC1Q8IX03 1113 aa21.63■■□□□ 1.05
CACNA1A-238ENST00000637276 TONSLQ96HA7 1378 aa21.58■■□□□ 1.04
CACNA1A-238ENST00000637276 FGD1P98174 961 aa21.57■■□□□ 1.04
CACNA1A-238ENST00000637276 ABCC9O60706 1549 aa21.57■■□□□ 1.04
CACNA1A-238ENST00000637276 KRI1Q8N9T8 703 aaKnown RBP21.57■■□□□ 1.04
CACNA1A-238ENST00000637276 OS9Q13438 667 aaPredicted RBP21.56■■□□□ 1.04
CACNA1A-238ENST00000637276 ZNF330Q9Y3S2 320 aaPredicted RBP21.53■■□□□ 1.04
CACNA1A-238ENST00000637276 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
CACNA1A-238ENST00000637276 RGL3Q3MIN7 710 aa21.48■■□□□ 1.03
CACNA1A-238ENST00000637276 KCNJ4P48050 445 aa21.46■■□□□ 1.03
CACNA1A-238ENST00000637276 MRS2Q9HD23 443 aa21.46■■□□□ 1.03
CACNA1A-238ENST00000637276 NOC3LQ8WTT2 800 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-238ENST00000637276 DRC7Q8IY82 874 aa21.41■■□□□ 1.02
CACNA1A-238ENST00000637276 CREBRFQ8IUR6 639 aa21.4■■□□□ 1.02
CACNA1A-238ENST00000637276 APBB1O00213 710 aa21.39■■□□□ 1.02
CACNA1A-238ENST00000637276 TRHP20396 242 aaPredicted RBP21.39■■□□□ 1.01
CACNA1A-238ENST00000637276 FTSJ3Q8IY81 847 aaKnown RBP21.39■■□□□ 1.01
CACNA1A-238ENST00000637276 GOLGA6L22H0YM25 854 aa21.37■■□□□ 1.01
CACNA1A-238ENST00000637276 FRAT1Q92837 279 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-238ENST00000637276 CASC1Q6TDU7 716 aa21.37■■□□□ 1.01
CACNA1A-238ENST00000637276 RGS3P49796 1198 aa21.36■■□□□ 1.01
CACNA1A-238ENST00000637276 CCDC9Q9Y3X0 531 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-238ENST00000637276 BECN1Q14457 450 aa21.32■■□□□ 1
CACNA1A-238ENST00000637276 MLECQ14165 292 aa21.32■■□□□ 1
CACNA1A-238ENST00000637276 PATL2C9JE40 543 aaKnown RBP21.31■■□□□ 1
CACNA1A-238ENST00000637276 MIER1Q8N108 512 aa21.31■■□□□ 1
CACNA1A-238ENST00000637276 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
CACNA1A-238ENST00000637276 GNL2Q13823 731 aaKnown RBP21.29■■□□□ 1
CACNA1A-238ENST00000637276 PNNQ9H307 717 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-238ENST00000637276 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
CACNA1A-238ENST00000637276 A0A0U1RQG5 324 aaPredicted RBP21.25■□□□□ 0.99
CACNA1A-238ENST00000637276 VPS53Q5VIR6 699 aa21.25■□□□□ 0.99
CACNA1A-238ENST00000637276 SAFB2Q14151 953 aaKnown RBP eCLIP21.24■□□□□ 0.99
CACNA1A-238ENST00000637276 U2SURPO15042 1029 aaKnown RBP21.22■□□□□ 0.99
CACNA1A-238ENST00000637276 GOLGA6L6A8MZA4 724 aa21.21■□□□□ 0.99
CACNA1A-238ENST00000637276 RRP7BPQ9NSQ0 103 aa21.2■□□□□ 0.98
CACNA1A-238ENST00000637276 GOLGA6L4A6NEF3 574 aa21.19■□□□□ 0.98
CACNA1A-238ENST00000637276 CC2D1BQ5T0F9 858 aaKnown RBP21.18■□□□□ 0.98
CACNA1A-238ENST00000637276 HSP90B1P14625 803 aaKnown RBP21.18■□□□□ 0.98
CACNA1A-238ENST00000637276 KLHL34Q8N239 644 aa21.16■□□□□ 0.98
CACNA1A-238ENST00000637276 G3V3G9 751 aa21.16■□□□□ 0.98
CACNA1A-238ENST00000637276 DCAF8Q5TAQ9 597 aa21.16■□□□□ 0.98
CACNA1A-238ENST00000637276 DDRGK1Q96HY6 314 aa21.15■□□□□ 0.98
CACNA1A-238ENST00000637276 SUPT16HQ9Y5B9 1047 aaKnown RBP21.14■□□□□ 0.97
CACNA1A-238ENST00000637276 PAK3O75914 559 aaPredicted RBP21.14■□□□□ 0.97
CACNA1A-238ENST00000637276 CHMP3Q9Y3E7 222 aa21.13■□□□□ 0.97
CACNA1A-238ENST00000637276 CNKSR2Q8WXI2 1034 aa21.13■□□□□ 0.97
CACNA1A-238ENST00000637276 KIAA2012Q0VF49 1180 aa21.13■□□□□ 0.97
CACNA1A-238ENST00000637276 RAD21O60216 631 aa21.11■□□□□ 0.97
CACNA1A-238ENST00000637276 TSPY4P0CV99 314 aa21.1■□□□□ 0.97
CACNA1A-238ENST00000637276 TSPY10P0CW01 314 aa21.1■□□□□ 0.97
CACNA1A-238ENST00000637276 POGKQ9P215 609 aa21.1■□□□□ 0.97
CACNA1A-238ENST00000637276 NOL8Q76FK4 1167 aaKnown RBP21.07■□□□□ 0.96
CACNA1A-238ENST00000637276 GZF1Q9H116 711 aaPredicted RBP21.07■□□□□ 0.96
CACNA1A-238ENST00000637276 MAPK8IP3Q9UPT6 1336 aa21.07■□□□□ 0.96
CACNA1A-238ENST00000637276 MSH5O43196 834 aa21.06■□□□□ 0.96
CACNA1A-238ENST00000637276 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.05■□□□□ 0.96
CACNA1A-238ENST00000637276 SAMD1Q6SPF0 538 aaPredicted RBP21.04■□□□□ 0.96
CACNA1A-238ENST00000637276 B4GALNT3Q6L9W6 998 aa21.01■□□□□ 0.95
CACNA1A-238ENST00000637276 FOXD4L1Q9NU39 408 aa21.01■□□□□ 0.95
CACNA1A-238ENST00000637276 FOXD4L5Q5VV16 416 aaPredicted RBP21■□□□□ 0.95
CACNA1A-238ENST00000637276 FOXD4L4Q8WXT5 416 aaPredicted RBP21■□□□□ 0.95
CACNA1A-238ENST00000637276 CSB-PGBD3P0DP91 1061 aa21■□□□□ 0.95
CACNA1A-238ENST00000637276 BCL11BQ9C0K0 894 aaPredicted RBP20.99■□□□□ 0.95
CACNA1A-238ENST00000637276 TMX4Q9H1E5 349 aaPredicted RBP20.99■□□□□ 0.95
CACNA1A-238ENST00000637276 RASSF8Q8NHQ8 419 aa20.98■□□□□ 0.95
CACNA1A-238ENST00000637276 CFAP53Q96M91 514 aa20.98■□□□□ 0.95
CACNA1A-238ENST00000637276 CHAF1AQ13111 956 aaPredicted RBP20.98■□□□□ 0.95
CACNA1A-238ENST00000637276 PES1O00541 588 aaKnown RBP20.97■□□□□ 0.95
CACNA1A-238ENST00000637276 L1TD1Q5T7N2 865 aaKnown RBP20.97■□□□□ 0.95
CACNA1A-238ENST00000637276 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms