RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 CFDP1Q9UEE9 299 aaPredicted RBP10.45□□□□□ -0.74
SMARCA2-252ENST00000636559 WDR43Q15061 677 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMARCA2-252ENST00000636559 FKBP8Q14318 412 aa10.44□□□□□ -0.74
SMARCA2-252ENST00000636559 ANP32AP39687 249 aaKnown RBP10.43□□□□□ -0.74
SMARCA2-252ENST00000636559 EIF4G2P78344 907 aaKnown RBP eCLIP10.43□□□□□ -0.744e-7■■■■□ 19.9
SMARCA2-252ENST00000636559 MRS2Q9HD23 443 aa10.42□□□□□ -0.74
SMARCA2-252ENST00000636559 HIRIP3Q9BW71 556 aaPredicted RBP10.42□□□□□ -0.74
SMARCA2-252ENST00000636559 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
SMARCA2-252ENST00000636559 NPM2Q86SE8 214 aaKnown RBP10.4□□□□□ -0.75
SMARCA2-252ENST00000636559 RGL3Q3MIN7 710 aa10.39□□□□□ -0.75
SMARCA2-252ENST00000636559 SENP3Q9H4L4 574 aaPredicted RBP10.39□□□□□ -0.75
SMARCA2-252ENST00000636559 CUX2O14529 1486 aa10.39□□□□□ -0.75
SMARCA2-252ENST00000636559 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.38□□□□□ -0.75
SMARCA2-252ENST00000636559 CARMIL1Q5VZK9 1371 aa10.38□□□□□ -0.75
SMARCA2-252ENST00000636559 SCAF1Q9H7N4 1312 aaKnown RBP10.37□□□□□ -0.75
SMARCA2-252ENST00000636559 ARID4BQ4LE39 1312 aaPredicted RBP10.37□□□□□ -0.75
SMARCA2-252ENST00000636559 EIF4G1Q04637 1599 aaKnown RBP10.37□□□□□ -0.75
SMARCA2-252ENST00000636559 MROH2BQ7Z745 1585 aa10.37□□□□□ -0.75
SMARCA2-252ENST00000636559 SMARCA2P51531 1590 aa10.36□□□□□ -0.75
SMARCA2-252ENST00000636559 FHAD1B1AJZ9 1412 aa10.36□□□□□ -0.75
SMARCA2-252ENST00000636559 CCDC88BA6NC98 1476 aa10.35□□□□□ -0.75
SMARCA2-252ENST00000636559 UPF2Q9HAU5 1272 aaKnown RBP10.35□□□□□ -0.75
SMARCA2-252ENST00000636559 SOGA1O94964 1423 aa10.34□□□□□ -0.75
SMARCA2-252ENST00000636559 MIER1Q8N108 512 aa10.34□□□□□ -0.75
SMARCA2-252ENST00000636559 CCNB3Q8WWL7 1395 aa10.33□□□□□ -0.76
SMARCA2-252ENST00000636559 CCDC136Q96JN2 1154 aa10.33□□□□□ -0.76
SMARCA2-252ENST00000636559 C14orf37Q86TY3 774 aa10.33□□□□□ -0.76
SMARCA2-252ENST00000636559 HSP90AA1P07900 732 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-252ENST00000636559 CDCA8Q53HL2 280 aa10.31□□□□□ -0.76
SMARCA2-252ENST00000636559 ZBTB7CA1YPR0 619 aa10.31□□□□□ -0.76
SMARCA2-252ENST00000636559 PDS5BQ9NTI5 1447 aa10.31□□□□□ -0.76
SMARCA2-252ENST00000636559 CARD11Q9BXL7 1154 aa10.31□□□□□ -0.76
SMARCA2-252ENST00000636559 PLEKHG5O94827 1062 aa10.3□□□□□ -0.76
SMARCA2-252ENST00000636559 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
SMARCA2-252ENST00000636559 KNSTRNQ9Y448 316 aa10.28□□□□□ -0.76
SMARCA2-252ENST00000636559 CFAP53Q96M91 514 aa10.27□□□□□ -0.77
SMARCA2-252ENST00000636559 A0A0G2JS52 829 aa10.26□□□□□ -0.77
SMARCA2-252ENST00000636559 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
SMARCA2-252ENST00000636559 MYH16Q9H6N6 1097 aa10.25□□□□□ -0.77
SMARCA2-252ENST00000636559 WIZO95785 1651 aa10.25□□□□□ -0.77
SMARCA2-252ENST00000636559 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
SMARCA2-252ENST00000636559 IRX6P78412 446 aaPredicted RBP10.24□□□□□ -0.77
SMARCA2-252ENST00000636559 CARMIL2Q6F5E8 1435 aa10.24□□□□□ -0.77
SMARCA2-252ENST00000636559 POGKQ9P215 609 aa10.24□□□□□ -0.77
SMARCA2-252ENST00000636559 KANK1Q14678 1352 aa10.24□□□□□ -0.77
SMARCA2-252ENST00000636559 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
SMARCA2-252ENST00000636559 PPM1GO15355 546 aaPredicted RBP10.23□□□□□ -0.77
SMARCA2-252ENST00000636559 VPS8Q8N3P4 1428 aa10.22□□□□□ -0.77
SMARCA2-252ENST00000636559 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
SMARCA2-252ENST00000636559 ARHGAP35Q9NRY4 1499 aa10.22□□□□□ -0.77
SMARCA2-252ENST00000636559 ANP32BQ92688 251 aaKnown RBP10.21□□□□□ -0.77
SMARCA2-252ENST00000636559 TRHP20396 242 aaPredicted RBP10.2□□□□□ -0.78
SMARCA2-252ENST00000636559 DCAF11Q8TEB1 546 aa10.2□□□□□ -0.78
SMARCA2-252ENST00000636559 CADPSQ9ULU8 1353 aa10.19□□□□□ -0.78
SMARCA2-252ENST00000636559 FMN1Q68DA7 1419 aa10.18□□□□□ -0.78
SMARCA2-252ENST00000636559 SETD5Q9C0A6 1442 aa10.18□□□□□ -0.78
SMARCA2-252ENST00000636559 MLECQ14165 292 aa10.18□□□□□ -0.78
SMARCA2-252ENST00000636559 SENP3-EIF4A1A0A087X0R7 540 aa10.17□□□□□ -0.78
SMARCA2-252ENST00000636559 NUDCQ9Y266 331 aa10.17□□□□□ -0.78
SMARCA2-252ENST00000636559 KANK4Q5T7N3 995 aaPredicted RBP10.17□□□□□ -0.78
SMARCA2-252ENST00000636559 MAPK8IP3Q9UPT6 1336 aa10.17□□□□□ -0.78
SMARCA2-252ENST00000636559 HDGFP51858 240 aaKnown RBP10.16□□□□□ -0.78
SMARCA2-252ENST00000636559 TMF1P82094 1093 aa10.16□□□□□ -0.78
SMARCA2-252ENST00000636559 LMOD2Q6P5Q4 547 aa10.16□□□□□ -0.78
SMARCA2-252ENST00000636559 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
SMARCA2-252ENST00000636559 ATAD2BQ9ULI0 1458 aa10.15□□□□□ -0.78
SMARCA2-252ENST00000636559 NEUROD2Q15784 382 aa10.15□□□□□ -0.78
SMARCA2-252ENST00000636559 CC2D1BQ5T0F9 858 aaKnown RBP10.15□□□□□ -0.78
SMARCA2-252ENST00000636559 TNNT2P45379 298 aaPredicted RBP10.15□□□□□ -0.78
SMARCA2-252ENST00000636559 GGT6Q6P531 493 aa10.15□□□□□ -0.79
SMARCA2-252ENST00000636559 SMARCA4P51532 1647 aa10.14□□□□□ -0.79
SMARCA2-252ENST00000636559 PKD2Q13563 968 aa10.14□□□□□ -0.79
SMARCA2-252ENST00000636559 RAPGEF2Q9Y4G8 1499 aa10.13□□□□□ -0.79
SMARCA2-252ENST00000636559 LAS1LQ9Y4W2 734 aaKnown RBP10.13□□□□□ -0.79
SMARCA2-252ENST00000636559 EFCAB2Q5VUJ9 269 aa10.13□□□□□ -0.79
SMARCA2-252ENST00000636559 FTSJ3Q8IY81 847 aaKnown RBP10.13□□□□□ -0.79
SMARCA2-252ENST00000636559 ARXQ96QS3 562 aa10.11□□□□□ -0.79
SMARCA2-252ENST00000636559 SUPT16HQ9Y5B9 1047 aaKnown RBP10.11□□□□□ -0.79
SMARCA2-252ENST00000636559 U2SURPO15042 1029 aaKnown RBP10.11□□□□□ -0.79
SMARCA2-252ENST00000636559 SRPK2P78362 688 aaKnown RBP10.11□□□□□ -0.79
SMARCA2-252ENST00000636559 FOXD1Q16676 465 aa10.1□□□□□ -0.79
SMARCA2-252ENST00000636559 ANKRD30AQ9BXX3 1397 aa10.1□□□□□ -0.79
SMARCA2-252ENST00000636559 PNNQ9H307 717 aaKnown RBP10.09□□□□□ -0.79
SMARCA2-252ENST00000636559 NBR1Q14596 966 aa10.09□□□□□ -0.79
SMARCA2-252ENST00000636559 FHOD3Q2V2M9 1422 aa10.09□□□□□ -0.79
SMARCA2-252ENST00000636559 NUP155O75694 1391 aa10.08□□□□□ -0.8
SMARCA2-252ENST00000636559 SAFB2Q14151 953 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMARCA2-252ENST00000636559 MPHOSPH9Q99550 1183 aa10.08□□□□□ -0.8
SMARCA2-252ENST00000636559 RAB3GAP2Q9H2M9 1393 aa10.08□□□□□ -0.8
SMARCA2-252ENST00000636559 BECN1Q14457 450 aa10.08□□□□□ -0.8
SMARCA2-252ENST00000636559 FANCD2Q9BXW9 1451 aa10.07□□□□□ -0.8
SMARCA2-252ENST00000636559 HSPA5P11021 654 aaKnown RBP10.07□□□□□ -0.8
SMARCA2-252ENST00000636559 DDRGK1Q96HY6 314 aa10.07□□□□□ -0.8
SMARCA2-252ENST00000636559 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
SMARCA2-252ENST00000636559 STK26Q9P289 416 aa10.06□□□□□ -0.8
SMARCA2-252ENST00000636559 FRAT1Q92837 279 aaPredicted RBP10.06□□□□□ -0.8
SMARCA2-252ENST00000636559 MORC1Q86VD1 984 aa10.06□□□□□ -0.8
SMARCA2-252ENST00000636559 CCDC18Q5T9S5 1454 aa10.06□□□□□ -0.8
SMARCA2-252ENST00000636559 HNRNPMP52272 730 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMARCA2-252ENST00000636559 CASC1Q6TDU7 716 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms