RNA–Protein interactions for RNA: ENST00000634467.1

AC055839.1-201, humanhuman

BASIC

Gene AC055839.1, Length 498 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055839.1-201ENST00000634467 ABCC9O60706 1549 aa8.54□□□□□ -1.04
AC055839.1-201ENST00000634467 RNF25Q96BH1 459 aaPredicted RBP8.54□□□□□ -1.04
AC055839.1-201ENST00000634467 CCDC61Q9Y6R9 512 aa8.54□□□□□ -1.04
AC055839.1-201ENST00000634467 C19orf67A6NJJ6 358 aa8.53□□□□□ -1.04
AC055839.1-201ENST00000634467 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
AC055839.1-201ENST00000634467 PYGBP11216 843 aa8.52□□□□□ -1.05
AC055839.1-201ENST00000634467 CHRM1P11229 460 aaPredicted RBP8.52□□□□□ -1.05
AC055839.1-201ENST00000634467 CD44P16070 742 aaKnown RBP8.51□□□□□ -1.05
AC055839.1-201ENST00000634467 EVX2Q03828 476 aa8.48□□□□□ -1.05
AC055839.1-201ENST00000634467 ZRANB1Q9UGI0 708 aa8.48□□□□□ -1.05
AC055839.1-201ENST00000634467 POTEHQ6S545 545 aa8.47□□□□□ -1.05
AC055839.1-201ENST00000634467 PAK3O75914 559 aaPredicted RBP8.46□□□□□ -1.06
AC055839.1-201ENST00000634467 PHF12Q96QT6 1004 aa8.45□□□□□ -1.06
AC055839.1-201ENST00000634467 DCAF8L2P0C7V8 631 aa8.44□□□□□ -1.06
AC055839.1-201ENST00000634467 KIF12Q96FN5 646 aa8.44□□□□□ -1.06
AC055839.1-201ENST00000634467 HAX1O00165 279 aa8.43□□□□□ -1.06
AC055839.1-201ENST00000634467 RIOK3O14730 519 aaKnown RBP8.43□□□□□ -1.06
AC055839.1-201ENST00000634467 ZNF579Q8NAF0 562 aaKnown RBP8.43□□□□□ -1.06
AC055839.1-201ENST00000634467 MAP3K13O43283 966 aa8.42□□□□□ -1.06
AC055839.1-201ENST00000634467 PCDHB8Q9UN66 801 aa8.4□□□□□ -1.06
AC055839.1-201ENST00000634467 PCDHB13Q9Y5F0 798 aa8.4□□□□□ -1.06
AC055839.1-201ENST00000634467 IFNL1Q8IU54 200 aa8.39□□□□□ -1.07
AC055839.1-201ENST00000634467 SLC24A1O60721 1099 aa8.38□□□□□ -1.07
AC055839.1-201ENST00000634467 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
AC055839.1-201ENST00000634467 VGFO15240 615 aaPredicted RBP8.37□□□□□ -1.07
AC055839.1-201ENST00000634467 ZNF467Q7Z7K2 595 aaPredicted RBP8.37□□□□□ -1.07
AC055839.1-201ENST00000634467 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.36□□□□□ -1.07
AC055839.1-201ENST00000634467 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
AC055839.1-201ENST00000634467 ZFP91Q96JP5 570 aaPredicted RBP8.36□□□□□ -1.07
AC055839.1-201ENST00000634467 HS6ST3Q8IZP7 471 aa8.35□□□□□ -1.07
AC055839.1-201ENST00000634467 MS4A3Q96HJ5 214 aa8.35□□□□□ -1.07
AC055839.1-201ENST00000634467 TRPC6Q9Y210 931 aa8.34□□□□□ -1.07
AC055839.1-201ENST00000634467 GALR2O43603 387 aaPredicted RBP8.32□□□□□ -1.08
AC055839.1-201ENST00000634467 STK25O00506 426 aa8.31□□□□□ -1.08
AC055839.1-201ENST00000634467 PSEN1P49768 467 aa8.31□□□□□ -1.08
AC055839.1-201ENST00000634467 PDAP1Q13442 181 aaKnown RBP8.31□□□□□ -1.08
AC055839.1-201ENST00000634467 DNAJC5Q9H3Z4 198 aa8.31□□□□□ -1.08
AC055839.1-201ENST00000634467 TAOK2Q9UL54 1235 aa8.31□□□□□ -1.08
AC055839.1-201ENST00000634467 CCDC180Q9P1Z9 1646 aa8.3□□□□□ -1.08
AC055839.1-201ENST00000634467 BBXQ8WY36 941 aaPredicted RBP8.3□□□□□ -1.08
AC055839.1-201ENST00000634467 BCL11BQ9C0K0 894 aaPredicted RBP8.3□□□□□ -1.08
AC055839.1-201ENST00000634467 NKX1-1Q15270 411 aaPredicted RBP8.28□□□□□ -1.08
AC055839.1-201ENST00000634467 STK24Q9Y6E0 443 aa8.28□□□□□ -1.08
AC055839.1-201ENST00000634467 GABBR2O75899 941 aa8.26□□□□□ -1.09
AC055839.1-201ENST00000634467 CLCN6P51797 869 aa8.24□□□□□ -1.09
AC055839.1-201ENST00000634467 PLCB2Q00722 1185 aa8.24□□□□□ -1.09
AC055839.1-201ENST00000634467 BMP2KQ9NSY1 1161 aaPredicted RBP8.23□□□□□ -1.09
AC055839.1-201ENST00000634467 TIE1P35590 1138 aa8.22□□□□□ -1.09
AC055839.1-201ENST00000634467 TMEM106CQ9BVX2 250 aa8.22□□□□□ -1.09
AC055839.1-201ENST00000634467 TTLL13PA6NNM8 815 aa8.21□□□□□ -1.1
AC055839.1-201ENST00000634467 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.21□□□□□ -1.1
AC055839.1-201ENST00000634467 PAXIP1Q6ZW49 1069 aaPredicted RBP8.2□□□□□ -1.1
AC055839.1-201ENST00000634467 SP7Q8TDD2 431 aaPredicted RBP8.2□□□□□ -1.1
AC055839.1-201ENST00000634467 CABP2Q9NPB3 220 aa8.2□□□□□ -1.1
AC055839.1-201ENST00000634467 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
AC055839.1-201ENST00000634467 EFCAB3Q8N7B9 438 aa8.19□□□□□ -1.1
AC055839.1-201ENST00000634467 CFAP44Q96MT7 982 aa8.18□□□□□ -1.1
AC055839.1-201ENST00000634467 ATMINO43313 823 aaPredicted RBP8.17□□□□□ -1.1
AC055839.1-201ENST00000634467 ATN1P54259 1190 aaPredicted RBP8.17□□□□□ -1.1
AC055839.1-201ENST00000634467 ASTLQ6HA08 431 aaPredicted RBP8.17□□□□□ -1.1
AC055839.1-201ENST00000634467 SPRYD3Q8NCJ5 442 aa8.17□□□□□ -1.1
AC055839.1-201ENST00000634467 MFRPQ9BY79 579 aa8.17□□□□□ -1.1
AC055839.1-201ENST00000634467 POTEIP0CG38 1075 aa8.14□□□□□ -1.11
AC055839.1-201ENST00000634467 FBXO22Q8NEZ5 403 aa8.14□□□□□ -1.11
AC055839.1-201ENST00000634467 PHF8Q9UPP1 1060 aa8.14□□□□□ -1.11
AC055839.1-201ENST00000634467 TRIM35Q9UPQ4 493 aa8.14□□□□□ -1.11
AC055839.1-201ENST00000634467 PELP1Q8IZL8 1130 aaKnown RBP8.13□□□□□ -1.11
AC055839.1-201ENST00000634467 SOX12O15370 315 aa8.12□□□□□ -1.11
AC055839.1-201ENST00000634467 ILDR1Q86SU0 546 aaPredicted RBP8.11□□□□□ -1.11
AC055839.1-201ENST00000634467 MS4A4AQ96JQ5 239 aa8.11□□□□□ -1.11
AC055839.1-201ENST00000634467 PPP1R37O75864 691 aa8.09□□□□□ -1.11
AC055839.1-201ENST00000634467 HAP1P54257 671 aaPredicted RBP8.09□□□□□ -1.11
AC055839.1-201ENST00000634467 MKRN3Q13064 507 aaKnown RBP8.09□□□□□ -1.11
AC055839.1-201ENST00000634467 DCBLD2Q96PD2 775 aa8.09□□□□□ -1.11
AC055839.1-201ENST00000634467 TSHZ2Q9NRE2 1034 aa8.09□□□□□ -1.11
AC055839.1-201ENST00000634467 NLRP6P59044 892 aa8.08□□□□□ -1.12
AC055839.1-201ENST00000634467 GOLGA2Q08379 1002 aa8.08□□□□□ -1.12
AC055839.1-201ENST00000634467 IRX5P78411 483 aaPredicted RBP8.06□□□□□ -1.12
AC055839.1-201ENST00000634467 RYDENQ9NUL5 291 aaKnown RBP8.06□□□□□ -1.12
AC055839.1-201ENST00000634467 PDCD7Q8N8D1 485 aaKnown RBP8.05□□□□□ -1.12
AC055839.1-201ENST00000634467 POTEFA5A3E0 1075 aa8.04□□□□□ -1.12
AC055839.1-201ENST00000634467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.04□□□□□ -1.12
AC055839.1-201ENST00000634467 IER5LQ5T953 404 aa8.03□□□□□ -1.12
AC055839.1-201ENST00000634467 DPY19L2Q6NUT2 758 aa8.03□□□□□ -1.12
AC055839.1-201ENST00000634467 COLQQ9Y215 455 aaPredicted RBP8.02□□□□□ -1.13
AC055839.1-201ENST00000634467 KDM2AQ9Y2K7 1162 aa8.02□□□□□ -1.13
AC055839.1-201ENST00000634467 CADPS2Q86UW7 1296 aa8□□□□□ -1.13
AC055839.1-201ENST00000634467 SLC39A7Q92504 469 aa8□□□□□ -1.13
AC055839.1-201ENST00000634467 OCEL1Q9H607 264 aa8□□□□□ -1.13
AC055839.1-201ENST00000634467 RB1CC1Q8TDY2 1594 aa8□□□□□ -1.13
AC055839.1-201ENST00000634467 UNC13AQ9UPW8 1703 aa7.99□□□□□ -1.13
AC055839.1-201ENST00000634467 C7P10643 843 aa7.98□□□□□ -1.13
AC055839.1-201ENST00000634467 METRNQ9UJH8 293 aa7.98□□□□□ -1.13
AC055839.1-201ENST00000634467 VSIG10Q8N0Z9 540 aa7.97□□□□□ -1.13
AC055839.1-201ENST00000634467 PLCG2P16885 1265 aa7.95□□□□□ -1.14
AC055839.1-201ENST00000634467 SEC24BO95487 1268 aa7.93□□□□□ -1.14
AC055839.1-201ENST00000634467 MICALL2Q8IY33 904 aa7.93□□□□□ -1.14
AC055839.1-201ENST00000634467 TMEM121BQ9BXQ6 578 aaPredicted RBP7.93□□□□□ -1.14
AC055839.1-201ENST00000634467 BOLA1Q9Y3E2 137 aa7.91□□□□□ -1.14
AC055839.1-201ENST00000634467 NCKAP5LQ9HCH0 1330 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms