RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 HIRIP3Q9BW71 556 aaPredicted RBP18.89■□□□□ 0.61
UBE3A-220ENST00000630424 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
UBE3A-220ENST00000630424 LMOD2Q6P5Q4 547 aa18.88■□□□□ 0.61
UBE3A-220ENST00000630424 CFDP1Q9UEE9 299 aaPredicted RBP18.86■□□□□ 0.61
UBE3A-220ENST00000630424 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
UBE3A-220ENST00000630424 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
UBE3A-220ENST00000630424 PPM1GO15355 546 aaPredicted RBP18.83■□□□□ 0.61
UBE3A-220ENST00000630424 ACIN1Q9UKV3 1341 aaKnown RBP18.83■□□□□ 0.61
UBE3A-220ENST00000630424 CLIP1P30622 1438 aa18.82■□□□□ 0.6
UBE3A-220ENST00000630424 EIF4G2P78344 907 aaKnown RBP eCLIP18.82■□□□□ 0.6
UBE3A-220ENST00000630424 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
UBE3A-220ENST00000630424 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
UBE3A-220ENST00000630424 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.59
UBE3A-220ENST00000630424 CFAP53Q96M91 514 aa18.73■□□□□ 0.59
UBE3A-220ENST00000630424 POGKQ9P215 609 aa18.73■□□□□ 0.59
UBE3A-220ENST00000630424 MLECQ14165 292 aa18.71■□□□□ 0.59
UBE3A-220ENST00000630424 CDCA8Q53HL2 280 aa18.68■□□□□ 0.58
UBE3A-220ENST00000630424 KNSTRNQ9Y448 316 aa18.68■□□□□ 0.58
UBE3A-220ENST00000630424 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
UBE3A-220ENST00000630424 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
UBE3A-220ENST00000630424 NPHP1O15259 732 aa18.67■□□□□ 0.58
UBE3A-220ENST00000630424 IRX6P78412 446 aaPredicted RBP18.66■□□□□ 0.58
UBE3A-220ENST00000630424 CDK11BP21127 795 aaKnown RBP18.64■□□□□ 0.58
UBE3A-220ENST00000630424 CARD11Q9BXL7 1154 aa18.64■□□□□ 0.58
UBE3A-220ENST00000630424 NEUROD2Q15784 382 aa18.64■□□□□ 0.57
UBE3A-220ENST00000630424 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
UBE3A-220ENST00000630424 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
UBE3A-220ENST00000630424 KIF27Q86VH2 1401 aa18.6■□□□□ 0.57
UBE3A-220ENST00000630424 WRNQ14191 1432 aaPredicted RBP eCLIP18.59■□□□□ 0.575e-6■■■■■ 29.2
UBE3A-220ENST00000630424 TNNT2P45379 298 aaPredicted RBP18.59■□□□□ 0.57
UBE3A-220ENST00000630424 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.56
UBE3A-220ENST00000630424 NUDCQ9Y266 331 aa18.56■□□□□ 0.56
UBE3A-220ENST00000630424 SOX12O15370 315 aa18.55■□□□□ 0.56
UBE3A-220ENST00000630424 GOLGA3Q08378 1498 aa18.53■□□□□ 0.56
UBE3A-220ENST00000630424 EIF5BO60841 1220 aaKnown RBP18.52■□□□□ 0.56
UBE3A-220ENST00000630424 EEA1Q15075 1411 aa18.52■□□□□ 0.56
UBE3A-220ENST00000630424 FTSJ3Q8IY81 847 aaKnown RBP18.51■□□□□ 0.55
UBE3A-220ENST00000630424 MIER1Q8N108 512 aa18.51■□□□□ 0.55
UBE3A-220ENST00000630424 HDGFP51858 240 aaKnown RBP18.51■□□□□ 0.55
UBE3A-220ENST00000630424 GGT6Q6P531 493 aa18.5■□□□□ 0.55
UBE3A-220ENST00000630424 DCAF1Q9Y4B6 1507 aa18.5■□□□□ 0.55
UBE3A-220ENST00000630424 U2SURPO15042 1029 aaKnown RBP18.5■□□□□ 0.55
UBE3A-220ENST00000630424 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
UBE3A-220ENST00000630424 NBR1Q14596 966 aa18.49■□□□□ 0.55
UBE3A-220ENST00000630424 CCNB3Q8WWL7 1395 aa18.48■□□□□ 0.55
UBE3A-220ENST00000630424 TULP1O00294 542 aaPredicted RBP18.48■□□□□ 0.55
UBE3A-220ENST00000630424 SAFB2Q14151 953 aaKnown RBP eCLIP18.47■□□□□ 0.552e-6■■■□□ 15.5
UBE3A-220ENST00000630424 NCLP19338 710 aaKnown RBP18.45■□□□□ 0.54
UBE3A-220ENST00000630424 SRPK2P78362 688 aaKnown RBP18.44■□□□□ 0.54
UBE3A-220ENST00000630424 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
UBE3A-220ENST00000630424 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
UBE3A-220ENST00000630424 KANK1Q14678 1352 aa18.42■□□□□ 0.54
UBE3A-220ENST00000630424 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
UBE3A-220ENST00000630424 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
UBE3A-220ENST00000630424 OS9Q13438 667 aaPredicted RBP18.41■□□□□ 0.54
UBE3A-220ENST00000630424 CC2D1BQ5T0F9 858 aaKnown RBP18.41■□□□□ 0.54
UBE3A-220ENST00000630424 BECN1Q14457 450 aa18.39■□□□□ 0.53
UBE3A-220ENST00000630424 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
UBE3A-220ENST00000630424 CASC1Q6TDU7 716 aa18.39■□□□□ 0.53
UBE3A-220ENST00000630424 ZRSR1Q15695 479 aaKnown RBP18.39■□□□□ 0.53
UBE3A-220ENST00000630424 STK26Q9P289 416 aa18.38■□□□□ 0.53
UBE3A-220ENST00000630424 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
UBE3A-220ENST00000630424 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
UBE3A-220ENST00000630424 CCDC180Q9P1Z9 1646 aa18.35■□□□□ 0.53
UBE3A-220ENST00000630424 GOLGA6L22H0YM25 854 aa18.35■□□□□ 0.53
UBE3A-220ENST00000630424 CEP164Q9UPV0 1460 aa18.35■□□□□ 0.53
UBE3A-220ENST00000630424 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
UBE3A-220ENST00000630424 TMF1P82094 1093 aa18.34■□□□□ 0.53
UBE3A-220ENST00000630424 FGD1P98174 961 aa18.33■□□□□ 0.53
UBE3A-220ENST00000630424 NACADO15069 1562 aa18.33■□□□□ 0.52
UBE3A-220ENST00000630424 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
UBE3A-220ENST00000630424 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
UBE3A-220ENST00000630424 CUX2O14529 1486 aa18.31■□□□□ 0.52
UBE3A-220ENST00000630424 TNIKQ9UKE5 1360 aa18.31■□□□□ 0.52
UBE3A-220ENST00000630424 KCNJ4P48050 445 aa18.3■□□□□ 0.52
UBE3A-220ENST00000630424 CSB-PGBD3P0DP91 1061 aa18.29■□□□□ 0.52
UBE3A-220ENST00000630424 RGS3P49796 1198 aa18.28■□□□□ 0.52
UBE3A-220ENST00000630424 MORC1Q86VD1 984 aa18.28■□□□□ 0.52
UBE3A-220ENST00000630424 NAP1L2Q9ULW6 460 aaPredicted RBP18.27■□□□□ 0.52
UBE3A-220ENST00000630424 CHMP4BQ9H444 224 aaKnown RBP18.27■□□□□ 0.52
UBE3A-220ENST00000630424 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.51
UBE3A-220ENST00000630424 SUPT16HQ9Y5B9 1047 aaKnown RBP18.26■□□□□ 0.51
UBE3A-220ENST00000630424 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
UBE3A-220ENST00000630424 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
UBE3A-220ENST00000630424 EFCAB2Q5VUJ9 269 aa18.25■□□□□ 0.51
UBE3A-220ENST00000630424 CCDC9Q9Y3X0 531 aaKnown RBP18.25■□□□□ 0.51
UBE3A-220ENST00000630424 RTF1Q92541 710 aaKnown RBP18.25■□□□□ 0.51
UBE3A-220ENST00000630424 MS4A1P11836 297 aa18.23■□□□□ 0.51
UBE3A-220ENST00000630424 CARMIL2Q6F5E8 1435 aa18.23■□□□□ 0.51
UBE3A-220ENST00000630424 PKD2Q13563 968 aa18.22■□□□□ 0.51
UBE3A-220ENST00000630424 ISY1Q9ULR0 285 aaKnown RBP18.22■□□□□ 0.51
UBE3A-220ENST00000630424 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
UBE3A-220ENST00000630424 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
UBE3A-220ENST00000630424 TRIM44Q96DX7 344 aaPredicted RBP18.2■□□□□ 0.5
UBE3A-220ENST00000630424 PTMAP06454 111 aaKnown RBP18.18■□□□□ 0.5
UBE3A-220ENST00000630424 KIF3BO15066 747 aa18.18■□□□□ 0.5
UBE3A-220ENST00000630424 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
UBE3A-220ENST00000630424 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
UBE3A-220ENST00000630424 FOXD1Q16676 465 aa18.16■□□□□ 0.5
UBE3A-220ENST00000630424 BAZ1AQ9NRL2 1556 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms