RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 CIZ1Q9ULV3 898 aaPredicted RBP7.16□□□□□ -1.26
SCARNA4-201ENST00000629045 CCDC61Q9Y6R9 512 aa7.15□□□□□ -1.26
SCARNA4-201ENST00000629045 ZNF579Q8NAF0 562 aaKnown RBP7.13□□□□□ -1.27
SCARNA4-201ENST00000629045 GSE1Q14687 1217 aa7.12□□□□□ -1.27
SCARNA4-201ENST00000629045 PYGBP11216 843 aa7.11□□□□□ -1.27
SCARNA4-201ENST00000629045 SP7Q8TDD2 431 aaPredicted RBP7.11□□□□□ -1.27
SCARNA4-201ENST00000629045 PKD2Q13563 968 aa7.09□□□□□ -1.27
SCARNA4-201ENST00000629045 KIF12Q96FN5 646 aa7.08□□□□□ -1.28
SCARNA4-201ENST00000629045 MAP3K13O43283 966 aa7.07□□□□□ -1.28
SCARNA4-201ENST00000629045 RTN4Q9NQC3 1192 aaKnown RBP7.07□□□□□ -1.28
SCARNA4-201ENST00000629045 GALR2O43603 387 aaPredicted RBP7.06□□□□□ -1.28
SCARNA4-201ENST00000629045 GABBR2O75899 941 aa7.06□□□□□ -1.28
SCARNA4-201ENST00000629045 MS4A3Q96HJ5 214 aa7.06□□□□□ -1.28
SCARNA4-201ENST00000629045 ECM2O94769 699 aaPredicted RBP7.04□□□□□ -1.28
SCARNA4-201ENST00000629045 PCDHB13Q9Y5F0 798 aa7.04□□□□□ -1.28
SCARNA4-201ENST00000629045 IFNL1Q8IU54 200 aa7.03□□□□□ -1.28
SCARNA4-201ENST00000629045 RNF25Q96BH1 459 aaPredicted RBP7.03□□□□□ -1.28
SCARNA4-201ENST00000629045 AMER1Q5JTC6 1135 aaPredicted RBP7.02□□□□□ -1.29
SCARNA4-201ENST00000629045 PCDHB8Q9UN66 801 aa7.02□□□□□ -1.29
SCARNA4-201ENST00000629045 TRPC6Q9Y210 931 aa7.02□□□□□ -1.29
SCARNA4-201ENST00000629045 TRIM41Q8WV44 630 aa7.01□□□□□ -1.29
SCARNA4-201ENST00000629045 RGL2O15211 777 aa7□□□□□ -1.29
SCARNA4-201ENST00000629045 CHRM1P11229 460 aaPredicted RBP7□□□□□ -1.29
SCARNA4-201ENST00000629045 ZNF467Q7Z7K2 595 aaPredicted RBP6.97□□□□□ -1.29
SCARNA4-201ENST00000629045 SGIP1Q9BQI5 828 aa6.97□□□□□ -1.29
SCARNA4-201ENST00000629045 RIOK3O14730 519 aaKnown RBP6.96□□□□□ -1.3
SCARNA4-201ENST00000629045 CLCN6P51797 869 aa6.95□□□□□ -1.3
SCARNA4-201ENST00000629045 POTEIP0CG38 1075 aa6.94□□□□□ -1.3
SCARNA4-201ENST00000629045 BMP2KQ9NSY1 1161 aaPredicted RBP6.94□□□□□ -1.3
SCARNA4-201ENST00000629045 DCBLD2Q96PD2 775 aa6.93□□□□□ -1.3
SCARNA4-201ENST00000629045 TTLL13PA6NNM8 815 aa6.92□□□□□ -1.3
SCARNA4-201ENST00000629045 DCAF8L2P0C7V8 631 aa6.92□□□□□ -1.3
SCARNA4-201ENST00000629045 PSEN1P49768 467 aa6.92□□□□□ -1.3
SCARNA4-201ENST00000629045 PDAP1Q13442 181 aaKnown RBP6.92□□□□□ -1.3
SCARNA4-201ENST00000629045 TMEM106CQ9BVX2 250 aa6.92□□□□□ -1.3
SCARNA4-201ENST00000629045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.91□□□□□ -1.3
SCARNA4-201ENST00000629045 TIE1P35590 1138 aa6.91□□□□□ -1.3
SCARNA4-201ENST00000629045 ZFP91Q96JP5 570 aaPredicted RBP6.91□□□□□ -1.3
SCARNA4-201ENST00000629045 VGFO15240 615 aaPredicted RBP6.9□□□□□ -1.3
SCARNA4-201ENST00000629045 ATMINO43313 823 aaPredicted RBP6.9□□□□□ -1.3
SCARNA4-201ENST00000629045 ATN1P54259 1190 aaPredicted RBP6.9□□□□□ -1.3
SCARNA4-201ENST00000629045 ASTLQ6HA08 431 aaPredicted RBP6.89□□□□□ -1.31
SCARNA4-201ENST00000629045 PELP1Q8IZL8 1130 aaKnown RBP6.89□□□□□ -1.31
SCARNA4-201ENST00000629045 TRIM35Q9UPQ4 493 aa6.88□□□□□ -1.31
SCARNA4-201ENST00000629045 BCL11BQ9C0K0 894 aaPredicted RBP6.87□□□□□ -1.31
SCARNA4-201ENST00000629045 STK25O00506 426 aa6.86□□□□□ -1.31
SCARNA4-201ENST00000629045 CABP2Q9NPB3 220 aa6.86□□□□□ -1.31
SCARNA4-201ENST00000629045 STK24Q9Y6E0 443 aa6.85□□□□□ -1.31
SCARNA4-201ENST00000629045 CHGAP10645 457 aaKnown RBP6.84□□□□□ -1.31
SCARNA4-201ENST00000629045 TAOK2Q9UL54 1235 aa6.83□□□□□ -1.32
SCARNA4-201ENST00000629045 HS6ST3Q8IZP7 471 aa6.82□□□□□ -1.32
SCARNA4-201ENST00000629045 GOLGA2Q08379 1002 aa6.81□□□□□ -1.32
SCARNA4-201ENST00000629045 EFCAB3Q8N7B9 438 aa6.81□□□□□ -1.32
SCARNA4-201ENST00000629045 METRNQ9UJH8 293 aa6.81□□□□□ -1.32
SCARNA4-201ENST00000629045 MKRN3Q13064 507 aaKnown RBP6.79□□□□□ -1.32
SCARNA4-201ENST00000629045 SLC39A7Q92504 469 aa6.79□□□□□ -1.32
SCARNA4-201ENST00000629045 POTEFA5A3E0 1075 aa6.78□□□□□ -1.32
SCARNA4-201ENST00000629045 COLQQ9Y215 455 aaPredicted RBP6.78□□□□□ -1.32
SCARNA4-201ENST00000629045 IER5LQ5T953 404 aa6.77□□□□□ -1.33
SCARNA4-201ENST00000629045 C7P10643 843 aa6.76□□□□□ -1.33
SCARNA4-201ENST00000629045 IRX5P78411 483 aaPredicted RBP6.76□□□□□ -1.33
SCARNA4-201ENST00000629045 NKX1-1Q15270 411 aaPredicted RBP6.76□□□□□ -1.33
SCARNA4-201ENST00000629045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCARNA4-201ENST00000629045 PHF8Q9UPP1 1060 aa6.76□□□□□ -1.33
SCARNA4-201ENST00000629045 SEC24BO95487 1268 aa6.75□□□□□ -1.33
SCARNA4-201ENST00000629045 PLCG2P16885 1265 aa6.75□□□□□ -1.33
SCARNA4-201ENST00000629045 PDCD7Q8N8D1 485 aaKnown RBP6.74□□□□□ -1.33
SCARNA4-201ENST00000629045 MFRPQ9BY79 579 aa6.74□□□□□ -1.33
SCARNA4-201ENST00000629045 POTEB2H3BUK9 544 aa6.73□□□□□ -1.33
SCARNA4-201ENST00000629045 DPY19L2Q6NUT2 758 aa6.72□□□□□ -1.33
SCARNA4-201ENST00000629045 FBXO22Q8NEZ5 403 aa6.72□□□□□ -1.33
SCARNA4-201ENST00000629045 MS4A4AQ96JQ5 239 aa6.72□□□□□ -1.33
SCARNA4-201ENST00000629045 OCEL1Q9H607 264 aa6.72□□□□□ -1.33
SCARNA4-201ENST00000629045 SOX12O15370 315 aa6.71□□□□□ -1.34
SCARNA4-201ENST00000629045 ILDR1Q86SU0 546 aaPredicted RBP6.71□□□□□ -1.34
SCARNA4-201ENST00000629045 DNAJC5Q9H3Z4 198 aa6.7□□□□□ -1.34
SCARNA4-201ENST00000629045 POTEJP0CG39 1038 aa6.69□□□□□ -1.34
SCARNA4-201ENST00000629045 NLRP6P59044 892 aa6.69□□□□□ -1.34
SCARNA4-201ENST00000629045 BBXQ8WY36 941 aaPredicted RBP6.68□□□□□ -1.34
SCARNA4-201ENST00000629045 GTPBP6O43824 516 aaPredicted RBP6.66□□□□□ -1.34
SCARNA4-201ENST00000629045 PPP1R37O75864 691 aa6.66□□□□□ -1.34
SCARNA4-201ENST00000629045 LHX8Q68G74 356 aa6.66□□□□□ -1.34
SCARNA4-201ENST00000629045 PAXIP1Q6ZW49 1069 aaPredicted RBP6.63□□□□□ -1.35
SCARNA4-201ENST00000629045 MICALL2Q8IY33 904 aa6.63□□□□□ -1.35
SCARNA4-201ENST00000629045 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.63□□□□□ -1.35
SCARNA4-201ENST00000629045 BOLA1Q9Y3E2 137 aa6.63□□□□□ -1.35
SCARNA4-201ENST00000629045 CFAP44Q96MT7 982 aa6.62□□□□□ -1.35
SCARNA4-201ENST00000629045 L3MBTL3Q96JM7 780 aaPredicted RBP6.61□□□□□ -1.35
SCARNA4-201ENST00000629045 G3V3G9 751 aa6.6□□□□□ -1.35
SCARNA4-201ENST00000629045 C3orf67Q6ZVT6 689 aa6.6□□□□□ -1.35
SCARNA4-201ENST00000629045 SPRYD3Q8NCJ5 442 aa6.6□□□□□ -1.35
SCARNA4-201ENST00000629045 OTUD5Q96G74 571 aa6.6□□□□□ -1.35
SCARNA4-201ENST00000629045 RYDENQ9NUL5 291 aaKnown RBP6.6□□□□□ -1.35
SCARNA4-201ENST00000629045 TMEM121BQ9BXQ6 578 aaPredicted RBP6.59□□□□□ -1.35
SCARNA4-201ENST00000629045 SCUBE2Q9NQ36 999 aa6.58□□□□□ -1.36
SCARNA4-201ENST00000629045 TMEM92Q6UXU6 159 aa6.56□□□□□ -1.36
SCARNA4-201ENST00000629045 MAMSTRQ6ZN01 415 aa6.56□□□□□ -1.36
SCARNA4-201ENST00000629045 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.56□□□□□ -1.36
SCARNA4-201ENST00000629045 PLCB2Q00722 1185 aa6.55□□□□□ -1.36
SCARNA4-201ENST00000629045 SLAIN1Q8ND83 568 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms