RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
CHD2-203ENST00000625243 SLC39A7Q92504 469 aa10.84□□□□□ -0.67
CHD2-203ENST00000625243 C7P10643 843 aa10.83□□□□□ -0.68
CHD2-203ENST00000625243 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
CHD2-203ENST00000625243 TSPYL2Q9H2G4 693 aaPredicted RBP10.82□□□□□ -0.68
CHD2-203ENST00000625243 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
CHD2-203ENST00000625243 MAMSTRQ6ZN01 415 aa10.77□□□□□ -0.69
CHD2-203ENST00000625243 CCDC61Q9Y6R9 512 aa10.75□□□□□ -0.69
CHD2-203ENST00000625243 ATN1P54259 1190 aaPredicted RBP10.73□□□□□ -0.69
CHD2-203ENST00000625243 PROM2Q8N271 834 aa10.73□□□□□ -0.69
CHD2-203ENST00000625243 KIF12Q96FN5 646 aa10.72□□□□□ -0.69
CHD2-203ENST00000625243 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
CHD2-203ENST00000625243 SCUBE2Q9NQ36 999 aa10.69□□□□□ -0.7
CHD2-203ENST00000625243 FAM163AQ96GL9 167 aaPredicted RBP10.68□□□□□ -0.7
CHD2-203ENST00000625243 BMP2KQ9NSY1 1161 aaPredicted RBP10.68□□□□□ -0.7
CHD2-203ENST00000625243 MAP3K13O43283 966 aa10.65□□□□□ -0.7
CHD2-203ENST00000625243 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
CHD2-203ENST00000625243 MIER1Q8N108 512 aa10.65□□□□□ -0.7
CHD2-203ENST00000625243 TRPC6Q9Y210 931 aa10.65□□□□□ -0.7
CHD2-203ENST00000625243 POTEFA5A3E0 1075 aa10.63□□□□□ -0.71
CHD2-203ENST00000625243 LCE2DQ5TA82 110 aaPredicted RBP10.63□□□□□ -0.71
CHD2-203ENST00000625243 RASEFQ8IZ41 740 aa10.62□□□□□ -0.71
CHD2-203ENST00000625243 TIE1P35590 1138 aa10.61□□□□□ -0.71
CHD2-203ENST00000625243 SEC24BO95487 1268 aa10.57□□□□□ -0.72
CHD2-203ENST00000625243 COLQQ9Y215 455 aaPredicted RBP10.56□□□□□ -0.72
CHD2-203ENST00000625243 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
CHD2-203ENST00000625243 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
CHD2-203ENST00000625243 PCDHB13Q9Y5F0 798 aa10.5□□□□□ -0.73
CHD2-203ENST00000625243 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
CHD2-203ENST00000625243 IER5LQ5T953 404 aa10.48□□□□□ -0.73
CHD2-203ENST00000625243 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
CHD2-203ENST00000625243 NUBP1P53384 320 aa10.43□□□□□ -0.74
CHD2-203ENST00000625243 IFNL1Q8IU54 200 aa10.43□□□□□ -0.74
CHD2-203ENST00000625243 CDAN1Q8IWY9 1227 aa10.43□□□□□ -0.74
CHD2-203ENST00000625243 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
CHD2-203ENST00000625243 SLAIN1Q8ND83 568 aa10.42□□□□□ -0.74
CHD2-203ENST00000625243 TMEM106CQ9BVX2 250 aa10.41□□□□□ -0.74
CHD2-203ENST00000625243 FAM212AQ96EL1 285 aa10.38□□□□□ -0.75
CHD2-203ENST00000625243 PLCG2P16885 1265 aa10.37□□□□□ -0.75
CHD2-203ENST00000625243 ST18O60284 1047 aa10.36□□□□□ -0.75
CHD2-203ENST00000625243 IRX5P78411 483 aaPredicted RBP10.31□□□□□ -0.76
CHD2-203ENST00000625243 OCEL1Q9H607 264 aa10.28□□□□□ -0.76
CHD2-203ENST00000625243 DCAF8Q5TAQ9 597 aa10.27□□□□□ -0.77
CHD2-203ENST00000625243 PYGBP11216 843 aa10.26□□□□□ -0.77
CHD2-203ENST00000625243 SNPHO15079 494 aa10.22□□□□□ -0.77
CHD2-203ENST00000625243 FKBP8Q14318 412 aa10.22□□□□□ -0.77
CHD2-203ENST00000625243 TMEM121BQ9BXQ6 578 aaPredicted RBP10.22□□□□□ -0.77
CHD2-203ENST00000625243 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.22□□□□□ -0.77
CHD2-203ENST00000625243 PCDHB8Q9UN66 801 aa10.22□□□□□ -0.77
CHD2-203ENST00000625243 SPNS2Q8IVW8 549 aa10.18□□□□□ -0.78
CHD2-203ENST00000625243 MARVELD3Q96A59 401 aa10.18□□□□□ -0.78
CHD2-203ENST00000625243 MMRN1Q13201 1228 aa10.17□□□□□ -0.78
CHD2-203ENST00000625243 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
CHD2-203ENST00000625243 C3orf67Q6ZVT6 689 aa10.11□□□□□ -0.79
CHD2-203ENST00000625243 MKRN3Q13064 507 aaKnown RBP10.1□□□□□ -0.79
CHD2-203ENST00000625243 PDCD7Q8N8D1 485 aaKnown RBP10.1□□□□□ -0.79
CHD2-203ENST00000625243 FBXO3Q9UK99 471 aa10.1□□□□□ -0.79
CHD2-203ENST00000625243 ZNF467Q7Z7K2 595 aaPredicted RBP10.09□□□□□ -0.79
CHD2-203ENST00000625243 L3MBTL3Q96JM7 780 aaPredicted RBP10.09□□□□□ -0.79
CHD2-203ENST00000625243 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
CHD2-203ENST00000625243 EMP3P54852 163 aa10.07□□□□□ -0.8
CHD2-203ENST00000625243 GSE1Q14687 1217 aa10.07□□□□□ -0.8
CHD2-203ENST00000625243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.82e-8■■□□□ 14.3
CHD2-203ENST00000625243 PSEN1P49768 467 aa10.03□□□□□ -0.8
CHD2-203ENST00000625243 CHRM1P11229 460 aaPredicted RBP10.02□□□□□ -0.81
CHD2-203ENST00000625243 FAM205CA6NFA0 338 aa10□□□□□ -0.81
CHD2-203ENST00000625243 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
CHD2-203ENST00000625243 POTEB3A0JP26 581 aa9.99□□□□□ -0.81
CHD2-203ENST00000625243 VASPP50552 380 aaPredicted RBP9.99□□□□□ -0.81
CHD2-203ENST00000625243 POTEBQ6S5H4 581 aa9.99□□□□□ -0.81
CHD2-203ENST00000625243 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
CHD2-203ENST00000625243 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
CHD2-203ENST00000625243 DPY19L2Q6NUT2 758 aa9.96□□□□□ -0.82
CHD2-203ENST00000625243 G3V3G9 751 aa9.93□□□□□ -0.82
CHD2-203ENST00000625243 PDAP1Q13442 181 aaKnown RBP9.93□□□□□ -0.82
CHD2-203ENST00000625243 ILDR1Q86SU0 546 aaPredicted RBP9.93□□□□□ -0.82
CHD2-203ENST00000625243 CABP2Q9NPB3 220 aa9.91□□□□□ -0.82
CHD2-203ENST00000625243 BOLA1Q9Y3E2 137 aa9.91□□□□□ -0.82
CHD2-203ENST00000625243 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
CHD2-203ENST00000625243 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
CHD2-203ENST00000625243 ZNF710Q8N1W2 664 aa9.86□□□□□ -0.83
CHD2-203ENST00000625243 HOXB1P14653 301 aaPredicted RBP9.83□□□□□ -0.84
CHD2-203ENST00000625243 SPOCK2Q92563 424 aa9.83□□□□□ -0.84
CHD2-203ENST00000625243 DOK7Q18PE1 504 aa9.82□□□□□ -0.84
CHD2-203ENST00000625243 ERBB3P21860 1342 aa9.82□□□□□ -0.84
CHD2-203ENST00000625243 IFNLR1Q8IU57 520 aaPredicted RBP9.78□□□□□ -0.84
CHD2-203ENST00000625243 RIMBP2O15034 1052 aa9.76□□□□□ -0.85
CHD2-203ENST00000625243 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
CHD2-203ENST00000625243 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
CHD2-203ENST00000625243 RNF166Q96A37 237 aaPredicted RBP9.74□□□□□ -0.85
CHD2-203ENST00000625243 MICALL2Q8IY33 904 aa9.69□□□□□ -0.86
CHD2-203ENST00000625243 MYT1LQ9UL68 1186 aa9.69□□□□□ -0.86
CHD2-203ENST00000625243 TMEM92Q6UXU6 159 aa9.68□□□□□ -0.86
CHD2-203ENST00000625243 ZSWIM6Q9HCJ5 1215 aa9.68□□□□□ -0.86
CHD2-203ENST00000625243 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
CHD2-203ENST00000625243 TRIM41Q8WV44 630 aa9.66□□□□□ -0.86
CHD2-203ENST00000625243 GPR153Q6NV75 609 aa9.64□□□□□ -0.87
CHD2-203ENST00000625243 SOX12O15370 315 aa9.62□□□□□ -0.87
CHD2-203ENST00000625243 MS4A4AQ96JQ5 239 aa9.6□□□□□ -0.87
CHD2-203ENST00000625243 ARSIQ5FYB1 569 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms