RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 NPM1P06748 294 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDKL5-208ENST00000624953 POTEB2H3BUK9 544 aa9.17□□□□□ -0.94
CDKL5-208ENST00000624953 RASEFQ8IZ41 740 aa9.17□□□□□ -0.94
CDKL5-208ENST00000624953 PAK3O75914 559 aaPredicted RBP9.16□□□□□ -0.94
CDKL5-208ENST00000624953 SPOCK2Q92563 424 aa9.16□□□□□ -0.94
CDKL5-208ENST00000624953 PELP1Q8IZL8 1130 aaKnown RBP9.15□□□□□ -0.94
CDKL5-208ENST00000624953 MS4A3Q96HJ5 214 aa9.13□□□□□ -0.95
CDKL5-208ENST00000624953 TSPYL2Q9H2G4 693 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-208ENST00000624953 CCDC61Q9Y6R9 512 aa9.11□□□□□ -0.95
CDKL5-208ENST00000624953 KLHL34Q8N239 644 aa9.09□□□□□ -0.95
CDKL5-208ENST00000624953 OTUD5Q96G74 571 aa9.09□□□□□ -0.95
CDKL5-208ENST00000624953 CHRM1P11229 460 aaPredicted RBP9.04□□□□□ -0.96
CDKL5-208ENST00000624953 PKD2Q13563 968 aa9.04□□□□□ -0.96
CDKL5-208ENST00000624953 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
CDKL5-208ENST00000624953 ATMINO43313 823 aaPredicted RBP9.03□□□□□ -0.96
CDKL5-208ENST00000624953 GSE1Q14687 1217 aa9.03□□□□□ -0.96
CDKL5-208ENST00000624953 TRPC6Q9Y210 931 aa9.03□□□□□ -0.96
CDKL5-208ENST00000624953 ASTLQ6HA08 431 aaPredicted RBP9.02□□□□□ -0.97
CDKL5-208ENST00000624953 POTEJP0CG39 1038 aa9.01□□□□□ -0.97
CDKL5-208ENST00000624953 KIF12Q96FN5 646 aa9□□□□□ -0.97
CDKL5-208ENST00000624953 METRNQ9UJH8 293 aa9□□□□□ -0.97
CDKL5-208ENST00000624953 ATN1P54259 1190 aaPredicted RBP8.99□□□□□ -0.97
CDKL5-208ENST00000624953 TRIM41Q8WV44 630 aa8.98□□□□□ -0.97
CDKL5-208ENST00000624953 SGIP1Q9BQI5 828 aa8.98□□□□□ -0.97
CDKL5-208ENST00000624953 MAP3K13O43283 966 aa8.96□□□□□ -0.98
CDKL5-208ENST00000624953 DCAF8Q5TAQ9 597 aa8.95□□□□□ -0.98
CDKL5-208ENST00000624953 BMP2KQ9NSY1 1161 aaPredicted RBP8.94□□□□□ -0.98
CDKL5-208ENST00000624953 POTEFA5A3E0 1075 aa8.93□□□□□ -0.98
CDKL5-208ENST00000624953 AMER1Q5JTC6 1135 aaPredicted RBP8.93□□□□□ -0.98
CDKL5-208ENST00000624953 SLC39A7Q92504 469 aa8.93□□□□□ -0.98
CDKL5-208ENST00000624953 RNF25Q96BH1 459 aaPredicted RBP8.92□□□□□ -0.98
CDKL5-208ENST00000624953 RTN4Q9NQC3 1192 aaKnown RBP8.92□□□□□ -0.98
CDKL5-208ENST00000624953 C7P10643 843 aa8.91□□□□□ -0.98
CDKL5-208ENST00000624953 PLSCR2Q9NRY7 297 aa8.91□□□□□ -0.98
CDKL5-208ENST00000624953 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
CDKL5-208ENST00000624953 PYGBP11216 843 aa8.89□□□□□ -0.99
CDKL5-208ENST00000624953 POTEMA6NI47 508 aa8.87□□□□□ -0.99
CDKL5-208ENST00000624953 IFNL1Q8IU54 200 aa8.87□□□□□ -0.99
CDKL5-208ENST00000624953 TTLL13PA6NNM8 815 aa8.84□□□□□ -0.99
CDKL5-208ENST00000624953 RGL2O15211 777 aa8.84□□□□□ -0.99
CDKL5-208ENST00000624953 TIE1P35590 1138 aa8.84□□□□□ -0.99
CDKL5-208ENST00000624953 POTEGQ6S5H5 508 aa8.84□□□□□ -0.99
CDKL5-208ENST00000624953 COLQQ9Y215 455 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-208ENST00000624953 ECM2O94769 699 aaPredicted RBP8.83□□□□□ -1
CDKL5-208ENST00000624953 LCE2DQ5TA82 110 aaPredicted RBP8.83□□□□□ -1
CDKL5-208ENST00000624953 ZNF467Q7Z7K2 595 aaPredicted RBP8.83□□□□□ -1
CDKL5-208ENST00000624953 PCDHB13Q9Y5F0 798 aa8.83□□□□□ -1
CDKL5-208ENST00000624953 RIOK3O14730 519 aaKnown RBP8.8□□□□□ -1
CDKL5-208ENST00000624953 PCDHB8Q9UN66 801 aa8.8□□□□□ -1
CDKL5-208ENST00000624953 TRIM35Q9UPQ4 493 aa8.79□□□□□ -1
CDKL5-208ENST00000624953 FAM163AQ96GL9 167 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-208ENST00000624953 SCUBE2Q9NQ36 999 aa8.77□□□□□ -1.01
CDKL5-208ENST00000624953 PDAP1Q13442 181 aaKnown RBP8.76□□□□□ -1.01
CDKL5-208ENST00000624953 MAMSTRQ6ZN01 415 aa8.76□□□□□ -1.01
CDKL5-208ENST00000624953 DNAJC5Q9H3Z4 198 aa8.76□□□□□ -1.01
CDKL5-208ENST00000624953 VGFO15240 615 aaPredicted RBP8.75□□□□□ -1.01
CDKL5-208ENST00000624953 SEC24BO95487 1268 aa8.75□□□□□ -1.01
CDKL5-208ENST00000624953 PSEN1P49768 467 aa8.73□□□□□ -1.01
CDKL5-208ENST00000624953 TMEM106CQ9BVX2 250 aa8.73□□□□□ -1.01
CDKL5-208ENST00000624953 ILDR1Q86SU0 546 aaPredicted RBP8.72□□□□□ -1.01
CDKL5-208ENST00000624953 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-208ENST00000624953 ZFP91Q96JP5 570 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-208ENST00000624953 HS6ST3Q8IZP7 471 aa8.69□□□□□ -1.02
CDKL5-208ENST00000624953 IER5LQ5T953 404 aa8.67□□□□□ -1.02
CDKL5-208ENST00000624953 TAOK2Q9UL54 1235 aa8.66□□□□□ -1.02
CDKL5-208ENST00000624953 IRX5P78411 483 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-208ENST00000624953 BCL11BQ9C0K0 894 aaPredicted RBP8.63□□□□□ -1.03
CDKL5-208ENST00000624953 PLCG2P16885 1265 aa8.62□□□□□ -1.03
CDKL5-208ENST00000624953 SLAIN1Q8ND83 568 aa8.62□□□□□ -1.03
CDKL5-208ENST00000624953 NKX1-1Q15270 411 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-208ENST00000624953 STK25O00506 426 aa8.58□□□□□ -1.04
CDKL5-208ENST00000624953 PDCD7Q8N8D1 485 aaKnown RBP8.58□□□□□ -1.04
CDKL5-208ENST00000624953 FBXO22Q8NEZ5 403 aa8.58□□□□□ -1.04
CDKL5-208ENST00000624953 CABP2Q9NPB3 220 aa8.58□□□□□ -1.04
CDKL5-208ENST00000624953 ST18O60284 1047 aa8.57□□□□□ -1.04
CDKL5-208ENST00000624953 EFCAB3Q8N7B9 438 aa8.57□□□□□ -1.04
CDKL5-208ENST00000624953 PCDH10Q9P2E7 1040 aa8.57□□□□□ -1.04
CDKL5-208ENST00000624953 SOX12O15370 315 aa8.56□□□□□ -1.04
CDKL5-208ENST00000624953 MFRPQ9BY79 579 aa8.56□□□□□ -1.04
CDKL5-208ENST00000624953 OCEL1Q9H607 264 aa8.56□□□□□ -1.04
CDKL5-208ENST00000624953 STK24Q9Y6E0 443 aa8.56□□□□□ -1.04
CDKL5-208ENST00000624953 CHGAP10645 457 aaKnown RBP8.55□□□□□ -1.04
CDKL5-208ENST00000624953 MS4A4AQ96JQ5 239 aa8.55□□□□□ -1.04
CDKL5-208ENST00000624953 CDAN1Q8IWY9 1227 aa8.54□□□□□ -1.04
CDKL5-208ENST00000624953 BBXQ8WY36 941 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-208ENST00000624953 MKRN3Q13064 507 aaKnown RBP8.5□□□□□ -1.05
CDKL5-208ENST00000624953 PHF8Q9UPP1 1060 aa8.5□□□□□ -1.05
CDKL5-208ENST00000624953 GTPBP6O43824 516 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-208ENST00000624953 TMEM121BQ9BXQ6 578 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-208ENST00000624953 NLRP6P59044 892 aa8.47□□□□□ -1.05
CDKL5-208ENST00000624953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDKL5-208ENST00000624953 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.47□□□□□ -1.05
CDKL5-208ENST00000624953 DPY19L2Q6NUT2 758 aa8.46□□□□□ -1.06
CDKL5-208ENST00000624953 MARVELD3Q96A59 401 aa8.46□□□□□ -1.06
CDKL5-208ENST00000624953 GOLGA2Q08379 1002 aa8.44□□□□□ -1.06
CDKL5-208ENST00000624953 PPP1R37O75864 691 aa8.42□□□□□ -1.06
CDKL5-208ENST00000624953 DCAF8L2P0C7V8 631 aa8.4□□□□□ -1.06
CDKL5-208ENST00000624953 RYDENQ9NUL5 291 aaKnown RBP8.4□□□□□ -1.06
CDKL5-208ENST00000624953 C3orf67Q6ZVT6 689 aa8.39□□□□□ -1.07
CDKL5-208ENST00000624953 POTEB3A0JP26 581 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms