RNA–Protein interactions for RNA: ENST00000623539.1

AP000648.3-201, humanhuman

BASIC

Gene AP000648.3, Length 4,507 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000648.3-201ENST00000623539 CD44P16070 742 aaKnown RBP4.27□□□□□ -1.73
AP000648.3-201ENST00000623539 ZNF467Q7Z7K2 595 aaPredicted RBP4.27□□□□□ -1.73
AP000648.3-201ENST00000623539 GABBR2O75899 941 aa4.27□□□□□ -1.73
AP000648.3-201ENST00000623539 FAM212AQ96EL1 285 aa4.27□□□□□ -1.73
AP000648.3-201ENST00000623539 IFNLR1Q8IU57 520 aaPredicted RBP4.27□□□□□ -1.73
AP000648.3-201ENST00000623539 SLC39A7Q92504 469 aa4.25□□□□□ -1.73
AP000648.3-201ENST00000623539 CLEC11AQ9Y240 323 aa4.25□□□□□ -1.73
AP000648.3-201ENST00000623539 C7P10643 843 aa4.24□□□□□ -1.73
AP000648.3-201ENST00000623539 MIER1Q8N108 512 aa4.23□□□□□ -1.73
AP000648.3-201ENST00000623539 ATMINO43313 823 aaPredicted RBP4.23□□□□□ -1.73
AP000648.3-201ENST00000623539 RASEFQ8IZ41 740 aa4.22□□□□□ -1.73
AP000648.3-201ENST00000623539 SOX12O15370 315 aa4.22□□□□□ -1.73
AP000648.3-201ENST00000623539 MAMSTRQ6ZN01 415 aa4.21□□□□□ -1.74
AP000648.3-201ENST00000623539 TMEM121BQ9BXQ6 578 aaPredicted RBP4.21□□□□□ -1.74
AP000648.3-201ENST00000623539 ZRANB1Q9UGI0 708 aa4.21□□□□□ -1.74
AP000648.3-201ENST00000623539 VGFO15240 615 aaPredicted RBP4.2□□□□□ -1.74
AP000648.3-201ENST00000623539 PLCD3Q8N3E9 789 aa4.19□□□□□ -1.74
AP000648.3-201ENST00000623539 EVX2Q03828 476 aa4.19□□□□□ -1.74
AP000648.3-201ENST00000623539 POTEIP0CG38 1075 aa4.18□□□□□ -1.74
AP000648.3-201ENST00000623539 PDAP1Q13442 181 aaKnown RBP4.18□□□□□ -1.74
AP000648.3-201ENST00000623539 HAX1O00165 279 aa4.17□□□□□ -1.74
AP000648.3-201ENST00000623539 RYDENQ9NUL5 291 aaKnown RBP4.17□□□□□ -1.74
AP000648.3-201ENST00000623539 PCDH10Q9P2E7 1040 aa4.17□□□□□ -1.74
AP000648.3-201ENST00000623539 IRX5P78411 483 aaPredicted RBP4.17□□□□□ -1.74
AP000648.3-201ENST00000623539 AMER1Q5JTC6 1135 aaPredicted RBP4.17□□□□□ -1.74
AP000648.3-201ENST00000623539 CHADLQ6NUI6 762 aa4.17□□□□□ -1.74
AP000648.3-201ENST00000623539 RIOK3O14730 519 aaKnown RBP4.16□□□□□ -1.74
AP000648.3-201ENST00000623539 HS6ST3Q8IZP7 471 aa4.16□□□□□ -1.74
AP000648.3-201ENST00000623539 BMP2KQ9NSY1 1161 aaPredicted RBP4.14□□□□□ -1.75
AP000648.3-201ENST00000623539 PKD2Q13563 968 aa4.14□□□□□ -1.75
AP000648.3-201ENST00000623539 MS4A3Q96HJ5 214 aa4.13□□□□□ -1.75
AP000648.3-201ENST00000623539 TTLL13PA6NNM8 815 aa4.12□□□□□ -1.75
AP000648.3-201ENST00000623539 MAP3K13O43283 966 aa4.12□□□□□ -1.75
AP000648.3-201ENST00000623539 L3MBTL3Q96JM7 780 aaPredicted RBP4.12□□□□□ -1.75
AP000648.3-201ENST00000623539 ARIH1Q9Y4X5 557 aaPredicted RBP4.12□□□□□ -1.75
AP000648.3-201ENST00000623539 ZSWIM6Q9HCJ5 1215 aa4.11□□□□□ -1.75
AP000648.3-201ENST00000623539 IFNL1Q8IU54 200 aa4.11□□□□□ -1.75
AP000648.3-201ENST00000623539 OCEL1Q9H607 264 aa4.11□□□□□ -1.75
AP000648.3-201ENST00000623539 PHF12Q96QT6 1004 aa4.09□□□□□ -1.75
AP000648.3-201ENST00000623539 PSEN1P49768 467 aa4.09□□□□□ -1.75
AP000648.3-201ENST00000623539 DCAF8Q5TAQ9 597 aa4.09□□□□□ -1.75
AP000648.3-201ENST00000623539 FBXO22Q8NEZ5 403 aa4.09□□□□□ -1.75
AP000648.3-201ENST00000623539 GALR2O43603 387 aaPredicted RBP4.09□□□□□ -1.75
AP000648.3-201ENST00000623539 SLC34A2O95436 690 aa4.09□□□□□ -1.75
AP000648.3-201ENST00000623539 PCDHB13Q9Y5F0 798 aa4.08□□□□□ -1.76
AP000648.3-201ENST00000623539 POTEFA5A3E0 1075 aa4.08□□□□□ -1.76
AP000648.3-201ENST00000623539 ATN1P54259 1190 aaPredicted RBP4.07□□□□□ -1.76
AP000648.3-201ENST00000623539 NLRP6P59044 892 aa4.07□□□□□ -1.76
AP000648.3-201ENST00000623539 PDCD7Q8N8D1 485 aaKnown RBP4.07□□□□□ -1.76
AP000648.3-201ENST00000623539 LHX8Q68G74 356 aa4.06□□□□□ -1.76
AP000648.3-201ENST00000623539 BBXQ8WY36 941 aaPredicted RBP4.06□□□□□ -1.76
AP000648.3-201ENST00000623539 DCBLD2Q96PD2 775 aa4.06□□□□□ -1.76
AP000648.3-201ENST00000623539 KIF3CO14782 793 aa4.05□□□□□ -1.76
AP000648.3-201ENST00000623539 PELP1Q8IZL8 1130 aaKnown RBP4.05□□□□□ -1.76
AP000648.3-201ENST00000623539 KLHL34Q8N239 644 aa4.05□□□□□ -1.76
AP000648.3-201ENST00000623539 MFSD10Q14728 455 aa4.05□□□□□ -1.76
AP000648.3-201ENST00000623539 RNF25Q96BH1 459 aaPredicted RBP4.04□□□□□ -1.76
AP000648.3-201ENST00000623539 SNPHO15079 494 aa4.04□□□□□ -1.76
AP000648.3-201ENST00000623539 TMEM106CQ9BVX2 250 aa4.03□□□□□ -1.76
AP000648.3-201ENST00000623539 METRNQ9UJH8 293 aa4.02□□□□□ -1.77
AP000648.3-201ENST00000623539 TSPYL2Q9H2G4 693 aaPredicted RBP4.02□□□□□ -1.77
AP000648.3-201ENST00000623539 ECM2O94769 699 aaPredicted RBP4□□□□□ -1.77
AP000648.3-201ENST00000623539 KDM4FA0A1W2PPD8 638 aa4□□□□□ -1.77
AP000648.3-201ENST00000623539 TRIM35Q9UPQ4 493 aa3.99□□□□□ -1.77
AP000648.3-201ENST00000623539 ONECUT3O60422 494 aaPredicted RBP3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 POTEJP0CG39 1038 aa3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 CAMK2BQ13554 666 aa3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 OTUD5Q96G74 571 aa3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 ZFP91Q96JP5 570 aaPredicted RBP3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 MS4A4AQ96JQ5 239 aa3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 PLCG2P16885 1265 aa3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 MKRN3Q13064 507 aaKnown RBP3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 SCUBE2Q9NQ36 999 aa3.98□□□□□ -1.77
AP000648.3-201ENST00000623539 PYGBP11216 843 aa3.97□□□□□ -1.77
AP000648.3-201ENST00000623539 MFRPQ9BY79 579 aa3.97□□□□□ -1.77
AP000648.3-201ENST00000623539 PTGER2P43116 358 aa3.96□□□□□ -1.77
AP000648.3-201ENST00000623539 SLC4A5Q9BY07 1137 aa3.96□□□□□ -1.77
AP000648.3-201ENST00000623539 TRPC6Q9Y210 931 aa3.96□□□□□ -1.77
AP000648.3-201ENST00000623539 BOLA1Q9Y3E2 137 aa3.96□□□□□ -1.77
AP000648.3-201ENST00000623539 PSDA5PKW4 1024 aaPredicted RBP3.95□□□□□ -1.78
AP000648.3-201ENST00000623539 RGL2O15211 777 aa3.95□□□□□ -1.78
AP000648.3-201ENST00000623539 PCDHB8Q9UN66 801 aa3.95□□□□□ -1.78
AP000648.3-201ENST00000623539 CRISPLD2Q9H0B8 497 aa3.95□□□□□ -1.78
AP000648.3-201ENST00000623539 ANO8Q9HCE9 1232 aaPredicted RBP3.95□□□□□ -1.78
AP000648.3-201ENST00000623539 GTPBP6O43824 516 aaPredicted RBP3.94□□□□□ -1.78
AP000648.3-201ENST00000623539 PTCD2Q8WV60 388 aaKnown RBP3.94□□□□□ -1.78
AP000648.3-201ENST00000623539 POTEB2H3BUK9 544 aa3.94□□□□□ -1.78
AP000648.3-201ENST00000623539 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.94□□□□□ -1.78
AP000648.3-201ENST00000623539 CIZ1Q9ULV3 898 aaPredicted RBP3.94□□□□□ -1.78
AP000648.3-201ENST00000623539 FOXK1P85037 733 aa3.93□□□□□ -1.78
AP000648.3-201ENST00000623539 COLQQ9Y215 455 aaPredicted RBP3.93□□□□□ -1.78
AP000648.3-201ENST00000623539 MICALL2Q8IY33 904 aa3.93□□□□□ -1.78
AP000648.3-201ENST00000623539 DOK7Q18PE1 504 aa3.92□□□□□ -1.78
AP000648.3-201ENST00000623539 GPHNQ9NQX3 736 aaPredicted RBP3.92□□□□□ -1.78
AP000648.3-201ENST00000623539 EFCAB3Q8N7B9 438 aa3.92□□□□□ -1.78
AP000648.3-201ENST00000623539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.92□□□□□ -1.78
AP000648.3-201ENST00000623539 HOXB1P14653 301 aaPredicted RBP3.92□□□□□ -1.78
AP000648.3-201ENST00000623539 HOXB3P14651 431 aaPredicted RBP3.91□□□□□ -1.78
AP000648.3-201ENST00000623539 PBX2P40425 430 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms