RNA–Protein interactions for RNA: ENST00000620149.1

SPTSSB-205, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 BASIC

Gene SPTSSB, Length 231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-205ENST00000620149 SCUBE2Q9NQ36 999 aa6.99□□□□□ -1.29
SPTSSB-205ENST00000620149 CREBZFQ9NS37 354 aa6.99□□□□□ -1.29
SPTSSB-205ENST00000620149 SPNS2Q8IVW8 549 aa6.98□□□□□ -1.29
SPTSSB-205ENST00000620149 MS4A3Q96HJ5 214 aa6.97□□□□□ -1.29
SPTSSB-205ENST00000620149 ZBTB22O15209 634 aa6.96□□□□□ -1.3
SPTSSB-205ENST00000620149 ATXN8OSP0DMR3 200 aa6.94□□□□□ -1.3
SPTSSB-205ENST00000620149 ATN1P54259 1190 aaPredicted RBP6.91□□□□□ -1.3
SPTSSB-205ENST00000620149 ST18O60284 1047 aa6.89□□□□□ -1.31
SPTSSB-205ENST00000620149 PAK3O75914 559 aaPredicted RBP6.87□□□□□ -1.31
SPTSSB-205ENST00000620149 SLC4A1APQ9BWU0 796 aaKnown RBP6.87□□□□□ -1.31
SPTSSB-205ENST00000620149 COLQQ9Y215 455 aaPredicted RBP6.82□□□□□ -1.32
SPTSSB-205ENST00000620149 TRPC6Q9Y210 931 aa6.81□□□□□ -1.32
SPTSSB-205ENST00000620149 MNX1P50219 401 aaPredicted RBP6.8□□□□□ -1.32
SPTSSB-205ENST00000620149 BMP2KQ9NSY1 1161 aaPredicted RBP6.79□□□□□ -1.32
SPTSSB-205ENST00000620149 SLAIN1Q8ND83 568 aa6.74□□□□□ -1.33
SPTSSB-205ENST00000620149 MARVELD3Q96A59 401 aa6.71□□□□□ -1.34
SPTSSB-205ENST00000620149 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
SPTSSB-205ENST00000620149 KRTAP3-2Q9BYR7 98 aa6.71□□□□□ -1.34
SPTSSB-205ENST00000620149 NPM1P06748 294 aaKnown RBP eCLIP6.7□□□□□ -1.34
SPTSSB-205ENST00000620149 CCDC61Q9Y6R9 512 aa6.7□□□□□ -1.34
SPTSSB-205ENST00000620149 KIF12Q96FN5 646 aa6.68□□□□□ -1.34
SPTSSB-205ENST00000620149 SEC24BO95487 1268 aa6.67□□□□□ -1.34
SPTSSB-205ENST00000620149 TIE1P35590 1138 aa6.67□□□□□ -1.34
SPTSSB-205ENST00000620149 TMEM121BQ9BXQ6 578 aaPredicted RBP6.67□□□□□ -1.34
SPTSSB-205ENST00000620149 STAG3Q9UJ98 1225 aa6.67□□□□□ -1.34
SPTSSB-205ENST00000620149 POTEB3A0JP26 581 aa6.65□□□□□ -1.34
SPTSSB-205ENST00000620149 TTLL13PA6NNM8 815 aa6.65□□□□□ -1.34
SPTSSB-205ENST00000620149 POTEBQ6S5H4 581 aa6.65□□□□□ -1.34
SPTSSB-205ENST00000620149 TSPYL2Q9H2G4 693 aaPredicted RBP6.64□□□□□ -1.35
SPTSSB-205ENST00000620149 MAP3K13O43283 966 aa6.61□□□□□ -1.35
SPTSSB-205ENST00000620149 TRIM35Q9UPQ4 493 aa6.6□□□□□ -1.35
SPTSSB-205ENST00000620149 IER5LQ5T953 404 aa6.59□□□□□ -1.35
SPTSSB-205ENST00000620149 HS3ST6Q96QI5 342 aa6.57□□□□□ -1.36
SPTSSB-205ENST00000620149 EMP3P54852 163 aa6.56□□□□□ -1.36
SPTSSB-205ENST00000620149 SNPHO15079 494 aa6.52□□□□□ -1.37
SPTSSB-205ENST00000620149 FAM205CA6NFA0 338 aa6.51□□□□□ -1.37
SPTSSB-205ENST00000620149 IRX5P78411 483 aaPredicted RBP6.5□□□□□ -1.37
SPTSSB-205ENST00000620149 RNF166Q96A37 237 aaPredicted RBP6.5□□□□□ -1.37
SPTSSB-205ENST00000620149 PLCG2P16885 1265 aa6.49□□□□□ -1.37
SPTSSB-205ENST00000620149 RASEFQ8IZ41 740 aa6.45□□□□□ -1.38
SPTSSB-205ENST00000620149 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.44□□□□□ -1.38
SPTSSB-205ENST00000620149 PCDHB13Q9Y5F0 798 aa6.41□□□□□ -1.38
SPTSSB-205ENST00000620149 SPDYE4A6NLX3 237 aa6.4□□□□□ -1.38
SPTSSB-205ENST00000620149 IFNL1Q8IU54 200 aa6.4□□□□□ -1.38
SPTSSB-205ENST00000620149 TMEM106CQ9BVX2 250 aa6.4□□□□□ -1.38
SPTSSB-205ENST00000620149 MYT1LQ9UL68 1186 aa6.39□□□□□ -1.39
SPTSSB-205ENST00000620149 SGIP1Q9BQI5 828 aa6.37□□□□□ -1.39
SPTSSB-205ENST00000620149 OCEL1Q9H607 264 aa6.37□□□□□ -1.39
SPTSSB-205ENST00000620149 PDCD7Q8N8D1 485 aaKnown RBP6.32□□□□□ -1.4
SPTSSB-205ENST00000620149 HOXB3P14651 431 aaPredicted RBP6.31□□□□□ -1.4
SPTSSB-205ENST00000620149 C3orf67Q6ZVT6 689 aa6.29□□□□□ -1.4
SPTSSB-205ENST00000620149 HOXB1P14653 301 aaPredicted RBP6.26□□□□□ -1.41
SPTSSB-205ENST00000620149 ERBB3P21860 1342 aa6.25□□□□□ -1.41
SPTSSB-205ENST00000620149 VARS2Q5ST30 1063 aaKnown RBP6.23□□□□□ -1.41
SPTSSB-205ENST00000620149 PLA2G2EQ9NZK7 142 aa6.23□□□□□ -1.41
SPTSSB-205ENST00000620149 PROM2Q8N271 834 aa6.21□□□□□ -1.42
SPTSSB-205ENST00000620149 NUBP1P53384 320 aa6.2□□□□□ -1.42
SPTSSB-205ENST00000620149 PTGER2P43116 358 aa6.19□□□□□ -1.42
SPTSSB-205ENST00000620149 L3MBTL3Q96JM7 780 aaPredicted RBP6.18□□□□□ -1.42
SPTSSB-205ENST00000620149 ZNF687Q8N1G0 1237 aa6.17□□□□□ -1.42
SPTSSB-205ENST00000620149 ZNF710Q8N1W2 664 aa6.15□□□□□ -1.42
SPTSSB-205ENST00000620149 PCDHB8Q9UN66 801 aa6.15□□□□□ -1.42
SPTSSB-205ENST00000620149 MIER1Q8N108 512 aa6.14□□□□□ -1.43
SPTSSB-205ENST00000620149 DPY19L2Q6NUT2 758 aa6.12□□□□□ -1.43
SPTSSB-205ENST00000620149 DOK7Q18PE1 504 aa6.11□□□□□ -1.43
SPTSSB-205ENST00000620149 ANKRD13DQ6ZTN6 518 aa6.11□□□□□ -1.43
SPTSSB-205ENST00000620149 PLEKHG5O94827 1062 aa6.1□□□□□ -1.43
SPTSSB-205ENST00000620149 ILDR1Q86SU0 546 aaPredicted RBP6.09□□□□□ -1.43
SPTSSB-205ENST00000620149 FAM212AQ96EL1 285 aa6.09□□□□□ -1.43
SPTSSB-205ENST00000620149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.09□□□□□ -1.43
SPTSSB-205ENST00000620149 PYGBP11216 843 aa6.08□□□□□ -1.44
SPTSSB-205ENST00000620149 LSM11P83369 360 aaKnown RBP eCLIP6.07□□□□□ -1.44
SPTSSB-205ENST00000620149 MKRN3Q13064 507 aaKnown RBP6.06□□□□□ -1.44
SPTSSB-205ENST00000620149 GPR153Q6NV75 609 aa6.04□□□□□ -1.44
SPTSSB-205ENST00000620149 IRX2Q9BZI1 471 aaPredicted RBP6.04□□□□□ -1.44
SPTSSB-205ENST00000620149 HCSTQ9UBK5 93 aa6.04□□□□□ -1.44
SPTSSB-205ENST00000620149 BOLA1Q9Y3E2 137 aa6.03□□□□□ -1.44
SPTSSB-205ENST00000620149 POTEEQ6S8J3 1075 aa6.02□□□□□ -1.45
SPTSSB-205ENST00000620149 RIMBP2O15034 1052 aa6.01□□□□□ -1.45
SPTSSB-205ENST00000620149 GOLGA2Q08379 1002 aa6.01□□□□□ -1.45
SPTSSB-205ENST00000620149 PLCD3Q8N3E9 789 aa6.01□□□□□ -1.45
SPTSSB-205ENST00000620149 TMEM92Q6UXU6 159 aa5.99□□□□□ -1.45
SPTSSB-205ENST00000620149 ZSWIM6Q9HCJ5 1215 aa5.99□□□□□ -1.45
SPTSSB-205ENST00000620149 ZNF316A6NFI3 1004 aaPredicted RBP5.96□□□□□ -1.46
SPTSSB-205ENST00000620149 KHSRPQ92945 711 aaKnown RBP eCLIP5.96□□□□□ -1.46
SPTSSB-205ENST00000620149 ZBTB47Q9UFB7 747 aaPredicted RBP5.95□□□□□ -1.46
SPTSSB-205ENST00000620149 G3V3G9 751 aa5.94□□□□□ -1.46
SPTSSB-205ENST00000620149 ARSIQ5FYB1 569 aa5.94□□□□□ -1.46
SPTSSB-205ENST00000620149 DCAF8Q5TAQ9 597 aa5.94□□□□□ -1.46
SPTSSB-205ENST00000620149 RGS20O76081 388 aa5.93□□□□□ -1.46
SPTSSB-205ENST00000620149 PSEN1P49768 467 aa5.93□□□□□ -1.46
SPTSSB-205ENST00000620149 CSRNP3Q8WYN3 585 aa5.93□□□□□ -1.46
SPTSSB-205ENST00000620149 AXIN2Q9Y2T1 843 aa5.93□□□□□ -1.46
SPTSSB-205ENST00000620149 LCE2BO14633 110 aa5.92□□□□□ -1.46
SPTSSB-205ENST00000620149 ZNF467Q7Z7K2 595 aaPredicted RBP5.92□□□□□ -1.46
SPTSSB-205ENST00000620149 A0A0G2JS52 829 aa5.88□□□□□ -1.47
SPTSSB-205ENST00000620149 PBX2P40425 430 aa5.88□□□□□ -1.47
SPTSSB-205ENST00000620149 ADGRD1Q6QNK2 874 aa5.88□□□□□ -1.47
SPTSSB-205ENST00000620149 Q6ZNB5 142 aa5.88□□□□□ -1.47
SPTSSB-205ENST00000620149 CABP2Q9NPB3 220 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms