RNA–Protein interactions for RNA: ENST00000618570.1

UBE2NL-201, Transcript of ubiquitin conjugating enzyme E2 N like (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene UBE2NL, Length 1,185 nt, Biotype polymorphic pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NL-201ENST00000618570 PHF12Q96QT6 1004 aa17.42■□□□□ 0.38
UBE2NL-201ENST00000618570 CCDC61Q9Y6R9 512 aa17.42■□□□□ 0.38
UBE2NL-201ENST00000618570 FAM212AQ96EL1 285 aa17.35■□□□□ 0.37
UBE2NL-201ENST00000618570 SPOCK2Q92563 424 aa17.31■□□□□ 0.36
UBE2NL-201ENST00000618570 GALR2O43603 387 aaPredicted RBP17.27■□□□□ 0.36
UBE2NL-201ENST00000618570 DCAF8Q5TAQ9 597 aa17.27■□□□□ 0.36
UBE2NL-201ENST00000618570 KIF12Q96FN5 646 aa17.27■□□□□ 0.36
UBE2NL-201ENST00000618570 GSE1Q14687 1217 aa17.2■□□□□ 0.34
UBE2NL-201ENST00000618570 MS4A3Q96HJ5 214 aa17.2■□□□□ 0.34
UBE2NL-201ENST00000618570 MAP3K13O43283 966 aa17.18■□□□□ 0.34
UBE2NL-201ENST00000618570 POTEIP0CG38 1075 aa17.15■□□□□ 0.34
UBE2NL-201ENST00000618570 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
UBE2NL-201ENST00000618570 SGIP1Q9BQI5 828 aa17.12■□□□□ 0.33
UBE2NL-201ENST00000618570 PYGBP11216 843 aa17.1■□□□□ 0.33
UBE2NL-201ENST00000618570 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
UBE2NL-201ENST00000618570 PCDHB13Q9Y5F0 798 aa17.08■□□□□ 0.32
UBE2NL-201ENST00000618570 CHRM1P11229 460 aaPredicted RBP17.04■□□□□ 0.32
UBE2NL-201ENST00000618570 IFNL1Q8IU54 200 aa17.02■□□□□ 0.32
UBE2NL-201ENST00000618570 TRPC6Q9Y210 931 aa17.01■□□□□ 0.31
UBE2NL-201ENST00000618570 ASTLQ6HA08 431 aaPredicted RBP16.97■□□□□ 0.31
UBE2NL-201ENST00000618570 ATMINO43313 823 aaPredicted RBP16.95■□□□□ 0.3
UBE2NL-201ENST00000618570 TIE1P35590 1138 aa16.94■□□□□ 0.3
UBE2NL-201ENST00000618570 BMP2KQ9NSY1 1161 aaPredicted RBP16.93■□□□□ 0.3
UBE2NL-201ENST00000618570 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
UBE2NL-201ENST00000618570 PCDHB8Q9UN66 801 aa16.91■□□□□ 0.3
UBE2NL-201ENST00000618570 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
UBE2NL-201ENST00000618570 ATN1P54259 1190 aaPredicted RBP16.88■□□□□ 0.29
UBE2NL-201ENST00000618570 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
UBE2NL-201ENST00000618570 TTLL13PA6NNM8 815 aa16.86■□□□□ 0.29
UBE2NL-201ENST00000618570 TMEM106CQ9BVX2 250 aa16.8■□□□□ 0.28
UBE2NL-201ENST00000618570 SLC39A7Q92504 469 aa16.77■□□□□ 0.28
UBE2NL-201ENST00000618570 PKD2Q13563 968 aa16.76■□□□□ 0.27
UBE2NL-201ENST00000618570 TRIM35Q9UPQ4 493 aa16.75■□□□□ 0.27
UBE2NL-201ENST00000618570 C7P10643 843 aa16.74■□□□□ 0.27
UBE2NL-201ENST00000618570 PSEN1P49768 467 aa16.72■□□□□ 0.27
UBE2NL-201ENST00000618570 METRNQ9UJH8 293 aa16.72■□□□□ 0.27
UBE2NL-201ENST00000618570 PDAP1Q13442 181 aaKnown RBP16.71■□□□□ 0.27
UBE2NL-201ENST00000618570 RNF25Q96BH1 459 aaPredicted RBP16.71■□□□□ 0.27
UBE2NL-201ENST00000618570 LHX8Q68G74 356 aa16.69■□□□□ 0.26
UBE2NL-201ENST00000618570 ECM2O94769 699 aaPredicted RBP16.67■□□□□ 0.26
UBE2NL-201ENST00000618570 RIOK3O14730 519 aaKnown RBP16.66■□□□□ 0.26
UBE2NL-201ENST00000618570 IER5LQ5T953 404 aa16.65■□□□□ 0.26
UBE2NL-201ENST00000618570 POTEFA5A3E0 1075 aa16.61■□□□□ 0.25
UBE2NL-201ENST00000618570 POTEB2H3BUK9 544 aa16.6■□□□□ 0.25
UBE2NL-201ENST00000618570 COLQQ9Y215 455 aaPredicted RBP16.57■□□□□ 0.24
UBE2NL-201ENST00000618570 VGFO15240 615 aaPredicted RBP16.56■□□□□ 0.24
UBE2NL-201ENST00000618570 RGL2O15211 777 aa16.55■□□□□ 0.24
UBE2NL-201ENST00000618570 SEC24BO95487 1268 aa16.54■□□□□ 0.24
UBE2NL-201ENST00000618570 IRX5P78411 483 aaPredicted RBP16.52■□□□□ 0.24
UBE2NL-201ENST00000618570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.51■□□□□ 0.23
UBE2NL-201ENST00000618570 GOLGA2Q08379 1002 aa16.51■□□□□ 0.23
UBE2NL-201ENST00000618570 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
UBE2NL-201ENST00000618570 CABP2Q9NPB3 220 aa16.5■□□□□ 0.23
UBE2NL-201ENST00000618570 MKRN3Q13064 507 aaKnown RBP16.48■□□□□ 0.23
UBE2NL-201ENST00000618570 TAOK2Q9UL54 1235 aa16.48■□□□□ 0.23
UBE2NL-201ENST00000618570 POTEJP0CG39 1038 aa16.47■□□□□ 0.23
UBE2NL-201ENST00000618570 PLCG2P16885 1265 aa16.46■□□□□ 0.23
UBE2NL-201ENST00000618570 OCEL1Q9H607 264 aa16.45■□□□□ 0.22
UBE2NL-201ENST00000618570 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
UBE2NL-201ENST00000618570 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
UBE2NL-201ENST00000618570 EFCAB3Q8N7B9 438 aa16.38■□□□□ 0.21
UBE2NL-201ENST00000618570 PDCD7Q8N8D1 485 aaKnown RBP16.38■□□□□ 0.21
UBE2NL-201ENST00000618570 BCL11BQ9C0K0 894 aaPredicted RBP16.38■□□□□ 0.21
UBE2NL-201ENST00000618570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBE2NL-201ENST00000618570 STK25O00506 426 aa16.34■□□□□ 0.21
UBE2NL-201ENST00000618570 MAMSTRQ6ZN01 415 aa16.34■□□□□ 0.21
UBE2NL-201ENST00000618570 STK24Q9Y6E0 443 aa16.33■□□□□ 0.2
UBE2NL-201ENST00000618570 SOX12O15370 315 aa16.29■□□□□ 0.2
UBE2NL-201ENST00000618570 SCUBE2Q9NQ36 999 aa16.27■□□□□ 0.2
UBE2NL-201ENST00000618570 DPY19L2Q6NUT2 758 aa16.24■□□□□ 0.19
UBE2NL-201ENST00000618570 AMER1Q5JTC6 1135 aaPredicted RBP16.22■□□□□ 0.19
UBE2NL-201ENST00000618570 L3MBTL3Q96JM7 780 aaPredicted RBP16.21■□□□□ 0.19
UBE2NL-201ENST00000618570 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.19
UBE2NL-201ENST00000618570 HS6ST3Q8IZP7 471 aa16.2■□□□□ 0.18
UBE2NL-201ENST00000618570 MS4A4AQ96JQ5 239 aa16.17■□□□□ 0.18
UBE2NL-201ENST00000618570 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
UBE2NL-201ENST00000618570 RTN4Q9NQC3 1192 aaKnown RBP16.16■□□□□ 0.18
UBE2NL-201ENST00000618570 NLRP6P59044 892 aa16.15■□□□□ 0.18
UBE2NL-201ENST00000618570 FBXO22Q8NEZ5 403 aa16.15■□□□□ 0.18
UBE2NL-201ENST00000618570 MFRPQ9BY79 579 aa16.15■□□□□ 0.18
UBE2NL-201ENST00000618570 BOLA1Q9Y3E2 137 aa16.12■□□□□ 0.17
UBE2NL-201ENST00000618570 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.09■□□□□ 0.17
UBE2NL-201ENST00000618570 TMEM121BQ9BXQ6 578 aaPredicted RBP16.08■□□□□ 0.16
UBE2NL-201ENST00000618570 DNAJC5Q9H3Z4 198 aa16.08■□□□□ 0.16
UBE2NL-201ENST00000618570 SLAIN1Q8ND83 568 aa16.07■□□□□ 0.16
UBE2NL-201ENST00000618570 C3orf67Q6ZVT6 689 aa16.06■□□□□ 0.16
UBE2NL-201ENST00000618570 G3V3G9 751 aa16.05■□□□□ 0.16
UBE2NL-201ENST00000618570 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
UBE2NL-201ENST00000618570 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
UBE2NL-201ENST00000618570 NKX1-1Q15270 411 aaPredicted RBP15.99■□□□□ 0.15
UBE2NL-201ENST00000618570 PPP1R37O75864 691 aa15.91■□□□□ 0.14
UBE2NL-201ENST00000618570 TMEM92Q6UXU6 159 aa15.86■□□□□ 0.13
UBE2NL-201ENST00000618570 RYDENQ9NUL5 291 aaKnown RBP15.85■□□□□ 0.13
UBE2NL-201ENST00000618570 FAM163AQ96GL9 167 aaPredicted RBP15.84■□□□□ 0.13
UBE2NL-201ENST00000618570 LCE2DQ5TA82 110 aaPredicted RBP15.83■□□□□ 0.12
UBE2NL-201ENST00000618570 SNPHO15079 494 aa15.81■□□□□ 0.12
UBE2NL-201ENST00000618570 GTPBP6O43824 516 aaPredicted RBP15.8■□□□□ 0.12
UBE2NL-201ENST00000618570 BBXQ8WY36 941 aaPredicted RBP15.75■□□□□ 0.11
UBE2NL-201ENST00000618570 ST18O60284 1047 aa15.73■□□□□ 0.11
UBE2NL-201ENST00000618570 KIF3CO14782 793 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms