RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 RASEFQ8IZ41 740 aa6.55□□□□□ -1.36
SMC5-204ENST00000618375 LHX8Q68G74 356 aa6.54□□□□□ -1.36
SMC5-204ENST00000618375 FAM212AQ96EL1 285 aa6.54□□□□□ -1.36
SMC5-204ENST00000618375 MS4A3Q96HJ5 214 aa6.54□□□□□ -1.36
SMC5-204ENST00000618375 CCDC61Q9Y6R9 512 aa6.54□□□□□ -1.36
SMC5-204ENST00000618375 VASPP50552 380 aaPredicted RBP6.51□□□□□ -1.37
SMC5-204ENST00000618375 DCAF8Q5TAQ9 597 aa6.5□□□□□ -1.37
SMC5-204ENST00000618375 KIF12Q96FN5 646 aa6.5□□□□□ -1.37
SMC5-204ENST00000618375 MAP3K13O43283 966 aa6.49□□□□□ -1.37
SMC5-204ENST00000618375 NUBP1P53384 320 aa6.49□□□□□ -1.37
SMC5-204ENST00000618375 PCDHB13Q9Y5F0 798 aa6.47□□□□□ -1.37
SMC5-204ENST00000618375 ATMINO43313 823 aaPredicted RBP6.45□□□□□ -1.38
SMC5-204ENST00000618375 ASTLQ6HA08 431 aaPredicted RBP6.44□□□□□ -1.38
SMC5-204ENST00000618375 SLC39A7Q92504 469 aa6.44□□□□□ -1.38
SMC5-204ENST00000618375 METRNQ9UJH8 293 aa6.44□□□□□ -1.38
SMC5-204ENST00000618375 PYGBP11216 843 aa6.43□□□□□ -1.38
SMC5-204ENST00000618375 PELP1Q8IZL8 1130 aaKnown RBP6.43□□□□□ -1.38
SMC5-204ENST00000618375 C7P10643 843 aa6.42□□□□□ -1.38
SMC5-204ENST00000618375 TIE1P35590 1138 aa6.42□□□□□ -1.38
SMC5-204ENST00000618375 ATN1P54259 1190 aaPredicted RBP6.42□□□□□ -1.38
SMC5-204ENST00000618375 GSE1Q14687 1217 aa6.42□□□□□ -1.38
SMC5-204ENST00000618375 SGIP1Q9BQI5 828 aa6.42□□□□□ -1.38
SMC5-204ENST00000618375 TRPC6Q9Y210 931 aa6.42□□□□□ -1.38
SMC5-204ENST00000618375 BMP2KQ9NSY1 1161 aaPredicted RBP6.41□□□□□ -1.38
SMC5-204ENST00000618375 SEC24BO95487 1268 aa6.4□□□□□ -1.38
SMC5-204ENST00000618375 MYT1Q01538 1121 aa6.4□□□□□ -1.38
SMC5-204ENST00000618375 IFNL1Q8IU54 200 aa6.4□□□□□ -1.38
SMC5-204ENST00000618375 CIZ1Q9ULV3 898 aaPredicted RBP6.4□□□□□ -1.38
SMC5-204ENST00000618375 TTLL13PA6NNM8 815 aa6.39□□□□□ -1.39
SMC5-204ENST00000618375 SPOCK2Q92563 424 aa6.39□□□□□ -1.39
SMC5-204ENST00000618375 IFNLR1Q8IU57 520 aaPredicted RBP6.38□□□□□ -1.39
SMC5-204ENST00000618375 TMEM106CQ9BVX2 250 aa6.38□□□□□ -1.39
SMC5-204ENST00000618375 TRIM35Q9UPQ4 493 aa6.38□□□□□ -1.39
SMC5-204ENST00000618375 POTEB2H3BUK9 544 aa6.35□□□□□ -1.39
SMC5-204ENST00000618375 PCDHB8Q9UN66 801 aa6.35□□□□□ -1.39
SMC5-204ENST00000618375 GOLGA2Q08379 1002 aa6.34□□□□□ -1.39
SMC5-204ENST00000618375 MAMSTRQ6ZN01 415 aa6.34□□□□□ -1.39
SMC5-204ENST00000618375 ZNF467Q7Z7K2 595 aaPredicted RBP6.34□□□□□ -1.39
SMC5-204ENST00000618375 SCUBE2Q9NQ36 999 aa6.34□□□□□ -1.39
SMC5-204ENST00000618375 OTUD5Q96G74 571 aa6.33□□□□□ -1.4
SMC5-204ENST00000618375 PLCG2P16885 1265 aa6.31□□□□□ -1.4
SMC5-204ENST00000618375 IER5LQ5T953 404 aa6.31□□□□□ -1.4
SMC5-204ENST00000618375 COLQQ9Y215 455 aaPredicted RBP6.29□□□□□ -1.4
SMC5-204ENST00000618375 CHRM1P11229 460 aaPredicted RBP6.28□□□□□ -1.4
SMC5-204ENST00000618375 MKRN3Q13064 507 aaKnown RBP6.28□□□□□ -1.4
SMC5-204ENST00000618375 PSEN1P49768 467 aa6.27□□□□□ -1.41
SMC5-204ENST00000618375 POTEFA5A3E0 1075 aa6.26□□□□□ -1.41
SMC5-204ENST00000618375 POTEJP0CG39 1038 aa6.25□□□□□ -1.41
SMC5-204ENST00000618375 PDAP1Q13442 181 aaKnown RBP6.25□□□□□ -1.41
SMC5-204ENST00000618375 TRIM41Q8WV44 630 aa6.25□□□□□ -1.41
SMC5-204ENST00000618375 OCEL1Q9H607 264 aa6.25□□□□□ -1.41
SMC5-204ENST00000618375 IRX5P78411 483 aaPredicted RBP6.23□□□□□ -1.41
SMC5-204ENST00000618375 TTBK1Q5TCY1 1321 aaPredicted RBP6.23□□□□□ -1.41
SMC5-204ENST00000618375 CABP2Q9NPB3 220 aa6.22□□□□□ -1.41
SMC5-204ENST00000618375 SLAIN1Q8ND83 568 aa6.21□□□□□ -1.42
SMC5-204ENST00000618375 FAM163AQ96GL9 167 aaPredicted RBP6.21□□□□□ -1.42
SMC5-204ENST00000618375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.21□□□□□ -1.422e-8■■■■■ 46.5
SMC5-204ENST00000618375 G3V3G9 751 aa6.2□□□□□ -1.42
SMC5-204ENST00000618375 C3orf67Q6ZVT6 689 aa6.19□□□□□ -1.42
SMC5-204ENST00000618375 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.18□□□□□ -1.42
SMC5-204ENST00000618375 POTEMA6NI47 508 aa6.17□□□□□ -1.42
SMC5-204ENST00000618375 RIOK3O14730 519 aaKnown RBP6.17□□□□□ -1.42
SMC5-204ENST00000618375 L3MBTL3Q96JM7 780 aaPredicted RBP6.17□□□□□ -1.42
SMC5-204ENST00000618375 TAOK2Q9UL54 1235 aa6.16□□□□□ -1.42
SMC5-204ENST00000618375 POTEGQ6S5H5 508 aa6.15□□□□□ -1.42
SMC5-204ENST00000618375 VGFO15240 615 aaPredicted RBP6.14□□□□□ -1.43
SMC5-204ENST00000618375 ECM2O94769 699 aaPredicted RBP6.14□□□□□ -1.43
SMC5-204ENST00000618375 PDCD7Q8N8D1 485 aaKnown RBP6.14□□□□□ -1.43
SMC5-204ENST00000618375 EFCAB3Q8N7B9 438 aa6.13□□□□□ -1.43
SMC5-204ENST00000618375 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.12□□□□□ -1.43
SMC5-204ENST00000618375 ZFP91Q96JP5 570 aaPredicted RBP6.12□□□□□ -1.43
SMC5-204ENST00000618375 PLSCR2Q9NRY7 297 aa6.12□□□□□ -1.43
SMC5-204ENST00000618375 SNPHO15079 494 aa6.11□□□□□ -1.43
SMC5-204ENST00000618375 RNF25Q96BH1 459 aaPredicted RBP6.11□□□□□ -1.43
SMC5-204ENST00000618375 DPY19L2Q6NUT2 758 aa6.1□□□□□ -1.43
SMC5-204ENST00000618375 BOLA1Q9Y3E2 137 aa6.09□□□□□ -1.43
SMC5-204ENST00000618375 STK24Q9Y6E0 443 aa6.09□□□□□ -1.43
SMC5-204ENST00000618375 STK25O00506 426 aa6.08□□□□□ -1.44
SMC5-204ENST00000618375 BCL11BQ9C0K0 894 aaPredicted RBP6.08□□□□□ -1.44
SMC5-204ENST00000618375 SOX12O15370 315 aa6.07□□□□□ -1.44
SMC5-204ENST00000618375 ST18O60284 1047 aa6.06□□□□□ -1.44
SMC5-204ENST00000618375 LCE2DQ5TA82 110 aaPredicted RBP6.05□□□□□ -1.44
SMC5-204ENST00000618375 ILDR1Q86SU0 546 aaPredicted RBP6.05□□□□□ -1.44
SMC5-204ENST00000618375 PCDH10Q9P2E7 1040 aa6.05□□□□□ -1.44
SMC5-204ENST00000618375 PKD2Q13563 968 aa6.04□□□□□ -1.44
SMC5-204ENST00000618375 PHF8Q9UPP1 1060 aa6.04□□□□□ -1.44
SMC5-204ENST00000618375 RGL2O15211 777 aa6.03□□□□□ -1.44
SMC5-204ENST00000618375 NLRP6P59044 892 aa6.03□□□□□ -1.44
SMC5-204ENST00000618375 TMEM121BQ9BXQ6 578 aaPredicted RBP6.03□□□□□ -1.44
SMC5-204ENST00000618375 ZNF710Q8N1W2 664 aa6.02□□□□□ -1.45
SMC5-204ENST00000618375 MICALL2Q8IY33 904 aa6.01□□□□□ -1.45
SMC5-204ENST00000618375 MARVELD3Q96A59 401 aa6.01□□□□□ -1.45
SMC5-204ENST00000618375 CDAN1Q8IWY9 1227 aa6□□□□□ -1.45
SMC5-204ENST00000618375 RIMBP2O15034 1052 aa5.99□□□□□ -1.45
SMC5-204ENST00000618375 EMP3P54852 163 aa5.99□□□□□ -1.45
SMC5-204ENST00000618375 DOK7Q18PE1 504 aa5.98□□□□□ -1.45
SMC5-204ENST00000618375 MS4A4AQ96JQ5 239 aa5.98□□□□□ -1.45
SMC5-204ENST00000618375 MFRPQ9BY79 579 aa5.96□□□□□ -1.46
SMC5-204ENST00000618375 FAM205CA6NFA0 338 aa5.95□□□□□ -1.46
SMC5-204ENST00000618375 DCAF8L2P0C7V8 631 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms