RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 ATMINO43313 823 aaPredicted RBP13.24□□□□□ -0.29
NEAT1-205ENST00000616315 MIER1Q8N108 512 aa13.22□□□□□ -0.29
NEAT1-205ENST00000616315 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
NEAT1-205ENST00000616315 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
NEAT1-205ENST00000616315 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
NEAT1-205ENST00000616315 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
NEAT1-205ENST00000616315 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
NEAT1-205ENST00000616315 ATN1P54259 1190 aaPredicted RBP13.14□□□□□ -0.31
NEAT1-205ENST00000616315 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
NEAT1-205ENST00000616315 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
NEAT1-205ENST00000616315 C7P10643 843 aa13.13□□□□□ -0.31
NEAT1-205ENST00000616315 MAP3K13O43283 966 aa13.12□□□□□ -0.31
NEAT1-205ENST00000616315 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
NEAT1-205ENST00000616315 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
NEAT1-205ENST00000616315 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
NEAT1-205ENST00000616315 FKBP8Q14318 412 aa13.03□□□□□ -0.32
NEAT1-205ENST00000616315 NUBP1P53384 320 aa13.02□□□□□ -0.33
NEAT1-205ENST00000616315 TIE1P35590 1138 aa13□□□□□ -0.33
NEAT1-205ENST00000616315 PLSCR2Q9NRY7 297 aa12.98□□□□□ -0.33
NEAT1-205ENST00000616315 POTEMA6NI47 508 aa12.97□□□□□ -0.33
NEAT1-205ENST00000616315 TTLL13PA6NNM8 815 aa12.97□□□□□ -0.33
NEAT1-205ENST00000616315 MAMSTRQ6ZN01 415 aa12.95□□□□□ -0.34
NEAT1-205ENST00000616315 POTEGQ6S5H5 508 aa12.93□□□□□ -0.34
NEAT1-205ENST00000616315 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
NEAT1-205ENST00000616315 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
NEAT1-205ENST00000616315 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
NEAT1-205ENST00000616315 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
NEAT1-205ENST00000616315 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
NEAT1-205ENST00000616315 LCE2DQ5TA82 110 aaPredicted RBP12.89□□□□□ -0.35
NEAT1-205ENST00000616315 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
NEAT1-205ENST00000616315 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
NEAT1-205ENST00000616315 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
NEAT1-205ENST00000616315 SEC24BO95487 1268 aa12.84□□□□□ -0.35
NEAT1-205ENST00000616315 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
NEAT1-205ENST00000616315 IER5LQ5T953 404 aa12.8□□□□□ -0.36
NEAT1-205ENST00000616315 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
NEAT1-205ENST00000616315 DCAF8Q5TAQ9 597 aa12.77□□□□□ -0.37
NEAT1-205ENST00000616315 PYGBP11216 843 aa12.75□□□□□ -0.37
NEAT1-205ENST00000616315 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
NEAT1-205ENST00000616315 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
NEAT1-205ENST00000616315 IRX5P78411 483 aaPredicted RBP12.69□□□□□ -0.38
NEAT1-205ENST00000616315 PCDH10Q9P2E7 1040 aa12.69□□□□□ -0.38
NEAT1-205ENST00000616315 PLCG2P16885 1265 aa12.66□□□□□ -0.38
NEAT1-205ENST00000616315 VASPP50552 380 aaPredicted RBP12.65□□□□□ -0.38
NEAT1-205ENST00000616315 SLAIN1Q8ND83 568 aa12.64□□□□□ -0.39
NEAT1-205ENST00000616315 KLHL34Q8N239 644 aa12.61□□□□□ -0.39
NEAT1-205ENST00000616315 OCEL1Q9H607 264 aa12.6□□□□□ -0.39
NEAT1-205ENST00000616315 ST18O60284 1047 aa12.55□□□□□ -0.4
NEAT1-205ENST00000616315 GSE1Q14687 1217 aa12.55□□□□□ -0.4
NEAT1-205ENST00000616315 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
NEAT1-205ENST00000616315 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
NEAT1-205ENST00000616315 CDAN1Q8IWY9 1227 aa12.5□□□□□ -0.41
NEAT1-205ENST00000616315 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
NEAT1-205ENST00000616315 IFNLR1Q8IU57 520 aaPredicted RBP12.45□□□□□ -0.42
NEAT1-205ENST00000616315 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
NEAT1-205ENST00000616315 PSEN1P49768 467 aa12.44□□□□□ -0.42
NEAT1-205ENST00000616315 MKRN3Q13064 507 aaKnown RBP12.42□□□□□ -0.42
NEAT1-205ENST00000616315 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
NEAT1-205ENST00000616315 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
NEAT1-205ENST00000616315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
NEAT1-205ENST00000616315 CIZ1Q9ULV3 898 aaPredicted RBP12.36□□□□□ -0.43
NEAT1-205ENST00000616315 SNPHO15079 494 aa12.35□□□□□ -0.43
NEAT1-205ENST00000616315 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
NEAT1-205ENST00000616315 ILDR1Q86SU0 546 aaPredicted RBP12.35□□□□□ -0.43
NEAT1-205ENST00000616315 L3MBTL3Q96JM7 780 aaPredicted RBP12.35□□□□□ -0.43
NEAT1-205ENST00000616315 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
NEAT1-205ENST00000616315 MARVELD3Q96A59 401 aa12.34□□□□□ -0.43
NEAT1-205ENST00000616315 TMEM121BQ9BXQ6 578 aaPredicted RBP12.34□□□□□ -0.43
NEAT1-205ENST00000616315 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
NEAT1-205ENST00000616315 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
NEAT1-205ENST00000616315 SPNS2Q8IVW8 549 aa12.22□□□□□ -0.45
NEAT1-205ENST00000616315 POTEB3A0JP26 581 aa12.21□□□□□ -0.45
NEAT1-205ENST00000616315 POTEBQ6S5H4 581 aa12.21□□□□□ -0.45
NEAT1-205ENST00000616315 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
NEAT1-205ENST00000616315 EMP3P54852 163 aa12.19□□□□□ -0.46
NEAT1-205ENST00000616315 MMRN1Q13201 1228 aa12.18□□□□□ -0.46
NEAT1-205ENST00000616315 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
NEAT1-205ENST00000616315 HOXB3P14651 431 aaPredicted RBP12.14□□□□□ -0.47
NEAT1-205ENST00000616315 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
NEAT1-205ENST00000616315 FAM205CA6NFA0 338 aa12.13□□□□□ -0.47
NEAT1-205ENST00000616315 G3V3G9 751 aa12.12□□□□□ -0.47
NEAT1-205ENST00000616315 TRIM41Q8WV44 630 aa12.11□□□□□ -0.47
NEAT1-205ENST00000616315 KRTAP3-3Q9BYR6 98 aa12.11□□□□□ -0.47
NEAT1-205ENST00000616315 KRTAP3-2Q9BYR7 98 aa12.11□□□□□ -0.47
NEAT1-205ENST00000616315 RNF25Q96BH1 459 aaPredicted RBP12.09□□□□□ -0.47
NEAT1-205ENST00000616315 TMEM92Q6UXU6 159 aa12.04□□□□□ -0.48
NEAT1-205ENST00000616315 RIOK3O14730 519 aaKnown RBP12.03□□□□□ -0.48
NEAT1-205ENST00000616315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
NEAT1-205ENST00000616315 HOXB1P14653 301 aaPredicted RBP12.02□□□□□ -0.49
NEAT1-205ENST00000616315 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
NEAT1-205ENST00000616315 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
NEAT1-205ENST00000616315 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
NEAT1-205ENST00000616315 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
NEAT1-205ENST00000616315 SOX12O15370 315 aa11.98□□□□□ -0.49
NEAT1-205ENST00000616315 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
NEAT1-205ENST00000616315 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
NEAT1-205ENST00000616315 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
NEAT1-205ENST00000616315 ERBB3P21860 1342 aa11.93□□□□□ -0.5
NEAT1-205ENST00000616315 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
NEAT1-205ENST00000616315 VARS2Q5ST30 1063 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms