RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
CDH4-203ENST00000614565 RGL3Q3MIN7 710 aa17.25■□□□□ 0.35
CDH4-203ENST00000614565 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
CDH4-203ENST00000614565 CSRNP3Q8WYN3 585 aa17.22■□□□□ 0.35
CDH4-203ENST00000614565 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.21■□□□□ 0.35
CDH4-203ENST00000614565 KLHL34Q8N239 644 aa17.18■□□□□ 0.34
CDH4-203ENST00000614565 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
CDH4-203ENST00000614565 POGKQ9P215 609 aa17.14■□□□□ 0.34
CDH4-203ENST00000614565 ANP32CO43423 234 aa17.14■□□□□ 0.33
CDH4-203ENST00000614565 GGT6Q6P531 493 aa17.13■□□□□ 0.33
CDH4-203ENST00000614565 RRP7BPQ9NSQ0 103 aa17.13■□□□□ 0.33
CDH4-203ENST00000614565 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
CDH4-203ENST00000614565 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
CDH4-203ENST00000614565 MTUS2Q5JR59 1369 aa17.1■□□□□ 0.33
CDH4-203ENST00000614565 WIZO95785 1651 aa17.1■□□□□ 0.33
CDH4-203ENST00000614565 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
CDH4-203ENST00000614565 SAFB2Q14151 953 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDH4-203ENST00000614565 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
CDH4-203ENST00000614565 MSH5O43196 834 aa17.06■□□□□ 0.32
CDH4-203ENST00000614565 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
CDH4-203ENST00000614565 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
CDH4-203ENST00000614565 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
CDH4-203ENST00000614565 ZNF330Q9Y3S2 320 aaPredicted RBP17.04■□□□□ 0.32
CDH4-203ENST00000614565 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
CDH4-203ENST00000614565 CFDP1Q9UEE9 299 aaPredicted RBP17.01■□□□□ 0.31
CDH4-203ENST00000614565 STK26Q9P289 416 aa16.99■□□□□ 0.31
CDH4-203ENST00000614565 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
CDH4-203ENST00000614565 LAS1LQ9Y4W2 734 aaKnown RBP16.97■□□□□ 0.31
CDH4-203ENST00000614565 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
CDH4-203ENST00000614565 ISY1Q9ULR0 285 aaKnown RBP16.95■□□□□ 0.3
CDH4-203ENST00000614565 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
CDH4-203ENST00000614565 WDR43Q15061 677 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDH4-203ENST00000614565 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
CDH4-203ENST00000614565 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
CDH4-203ENST00000614565 HDGFP51858 240 aaKnown RBP16.91■□□□□ 0.3
CDH4-203ENST00000614565 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
CDH4-203ENST00000614565 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
CDH4-203ENST00000614565 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
CDH4-203ENST00000614565 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
CDH4-203ENST00000614565 SOGA1O94964 1423 aa16.88■□□□□ 0.29
CDH4-203ENST00000614565 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
CDH4-203ENST00000614565 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
CDH4-203ENST00000614565 TMX4Q9H1E5 349 aaPredicted RBP16.87■□□□□ 0.29
CDH4-203ENST00000614565 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
CDH4-203ENST00000614565 HSP90AA1P07900 732 aaKnown RBP16.83■□□□□ 0.29
CDH4-203ENST00000614565 HIRIP3Q9BW71 556 aaPredicted RBP16.83■□□□□ 0.29
CDH4-203ENST00000614565 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
CDH4-203ENST00000614565 G3V3G9 751 aa16.82■□□□□ 0.28
CDH4-203ENST00000614565 DCAF8Q5TAQ9 597 aa16.82■□□□□ 0.28
CDH4-203ENST00000614565 PIP4K2BP78356 416 aa16.82■□□□□ 0.28
CDH4-203ENST00000614565 PPP1R1BQ9UD71 204 aaPredicted RBP16.82■□□□□ 0.28
CDH4-203ENST00000614565 SRPK2P78362 688 aaKnown RBP16.82■□□□□ 0.28
CDH4-203ENST00000614565 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
CDH4-203ENST00000614565 NEUROD2Q15784 382 aa16.79■□□□□ 0.28
CDH4-203ENST00000614565 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
CDH4-203ENST00000614565 FAM69CQ0P6D2 419 aa16.79■□□□□ 0.28
CDH4-203ENST00000614565 SMARCA4P51532 1647 aa16.79■□□□□ 0.28
CDH4-203ENST00000614565 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
CDH4-203ENST00000614565 EVA1CP58658 441 aa16.77■□□□□ 0.28
CDH4-203ENST00000614565 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
CDH4-203ENST00000614565 CLSTN1O94985 981 aa16.76■□□□□ 0.27
CDH4-203ENST00000614565 EEA1Q15075 1411 aa16.75■□□□□ 0.27
CDH4-203ENST00000614565 MYH16Q9H6N6 1097 aa16.74■□□□□ 0.27
CDH4-203ENST00000614565 KANK1Q14678 1352 aa16.74■□□□□ 0.27
CDH4-203ENST00000614565 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
CDH4-203ENST00000614565 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
CDH4-203ENST00000614565 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
CDH4-203ENST00000614565 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.27
CDH4-203ENST00000614565 GTF3C3Q9Y5Q9 886 aa16.71■□□□□ 0.27
CDH4-203ENST00000614565 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
CDH4-203ENST00000614565 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
CDH4-203ENST00000614565 NUTM2BA6NNL0 878 aaPredicted RBP16.67■□□□□ 0.26
CDH4-203ENST00000614565 NUTM2EB1AL46 878 aaPredicted RBP16.67■□□□□ 0.26
CDH4-203ENST00000614565 SF3B2Q13435 895 aaKnown RBP16.67■□□□□ 0.26
CDH4-203ENST00000614565 NUTM2AQ8IVF1 878 aaPredicted RBP16.67■□□□□ 0.26
CDH4-203ENST00000614565 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
CDH4-203ENST00000614565 OS9Q13438 667 aaPredicted RBP16.66■□□□□ 0.26
CDH4-203ENST00000614565 SYTL4Q96C24 671 aaPredicted RBP16.66■□□□□ 0.26
CDH4-203ENST00000614565 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
CDH4-203ENST00000614565 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.26
CDH4-203ENST00000614565 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
CDH4-203ENST00000614565 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
CDH4-203ENST00000614565 NGDNQ8NEJ9 315 aaKnown RBP16.63■□□□□ 0.25
CDH4-203ENST00000614565 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
CDH4-203ENST00000614565 CLIP1P30622 1438 aa16.62■□□□□ 0.25
CDH4-203ENST00000614565 KIF3BO15066 747 aa16.61■□□□□ 0.25
CDH4-203ENST00000614565 NAP1L2Q9ULW6 460 aaPredicted RBP16.61■□□□□ 0.25
CDH4-203ENST00000614565 MAPK8IP3Q9UPT6 1336 aa16.6■□□□□ 0.25
CDH4-203ENST00000614565 CCNB3Q8WWL7 1395 aa16.59■□□□□ 0.25
CDH4-203ENST00000614565 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
CDH4-203ENST00000614565 KNSTRNQ9Y448 316 aa16.59■□□□□ 0.25
CDH4-203ENST00000614565 EIF4G2P78344 907 aaKnown RBP eCLIP16.58■□□□□ 0.25
CDH4-203ENST00000614565 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
CDH4-203ENST00000614565 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
CDH4-203ENST00000614565 ACIN1Q9UKV3 1341 aaKnown RBP16.55■□□□□ 0.24
CDH4-203ENST00000614565 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
CDH4-203ENST00000614565 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
CDH4-203ENST00000614565 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
CDH4-203ENST00000614565 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
CDH4-203ENST00000614565 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms