RNA–Protein interactions for RNA: ENST00000614096.4

UBE3A-207, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE3A, Length 8,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-207ENST00000614096 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
UBE3A-207ENST00000614096 DDX10Q13206 875 aaKnown RBP19.14■□□□□ 0.65
UBE3A-207ENST00000614096 KIAA2012Q0VF49 1180 aa19.07■□□□□ 0.64
UBE3A-207ENST00000614096 GOLGA6L1Q8N7Z2 621 aa19.06■□□□□ 0.64
UBE3A-207ENST00000614096 MS4A1P11836 297 aa19.04■□□□□ 0.64
UBE3A-207ENST00000614096 SETQ01105 290 aaPredicted RBP19.04■□□□□ 0.64
UBE3A-207ENST00000614096 HSP90AB1P08238 724 aaKnown RBP19.04■□□□□ 0.64
UBE3A-207ENST00000614096 CALRP27797 417 aaKnown RBP19.04■□□□□ 0.64
UBE3A-207ENST00000614096 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
UBE3A-207ENST00000614096 RTN4Q9NQC3 1192 aaKnown RBP19.02■□□□□ 0.64
UBE3A-207ENST00000614096 PPP4R2Q9NY27 417 aa19.01■□□□□ 0.63
UBE3A-207ENST00000614096 PNNQ9H307 717 aaKnown RBP19■□□□□ 0.63
UBE3A-207ENST00000614096 DEKP35659 375 aaKnown RBP19■□□□□ 0.63
UBE3A-207ENST00000614096 GOLGA6L4A6NEF3 574 aa19■□□□□ 0.63
UBE3A-207ENST00000614096 HSCBQ8IWL3 235 aa18.99■□□□□ 0.63
UBE3A-207ENST00000614096 SYAP1Q96A49 352 aaPredicted RBP18.98■□□□□ 0.63
UBE3A-207ENST00000614096 ESF1Q9H501 851 aaKnown RBP18.98■□□□□ 0.63
UBE3A-207ENST00000614096 DRC7Q8IY82 874 aa18.97■□□□□ 0.63
UBE3A-207ENST00000614096 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
UBE3A-207ENST00000614096 RSPH6AQ9H0K4 717 aa18.97■□□□□ 0.63
UBE3A-207ENST00000614096 SALL2Q9Y467 1007 aaPredicted RBP18.97■□□□□ 0.63
UBE3A-207ENST00000614096 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
UBE3A-207ENST00000614096 GBP4Q96PP9 640 aa18.93■□□□□ 0.62
UBE3A-207ENST00000614096 CDCA8Q53HL2 280 aa18.92■□□□□ 0.62
UBE3A-207ENST00000614096 NOC3LQ8WTT2 800 aaKnown RBP18.92■□□□□ 0.62
UBE3A-207ENST00000614096 MCCP23508 829 aa18.92■□□□□ 0.62
UBE3A-207ENST00000614096 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
UBE3A-207ENST00000614096 HSP90AA2PQ14568 343 aaPredicted RBP18.9■□□□□ 0.62
UBE3A-207ENST00000614096 AMER1Q5JTC6 1135 aaPredicted RBP18.89■□□□□ 0.61
UBE3A-207ENST00000614096 LAS1LQ9Y4W2 734 aaKnown RBP18.89■□□□□ 0.61
UBE3A-207ENST00000614096 CFAP53Q96M91 514 aa18.88■□□□□ 0.61
UBE3A-207ENST00000614096 MIER1Q8N108 512 aa18.88■□□□□ 0.61
UBE3A-207ENST00000614096 FGD1P98174 961 aa18.86■□□□□ 0.61
UBE3A-207ENST00000614096 PHF14O94880 888 aa18.86■□□□□ 0.61
UBE3A-207ENST00000614096 HTATSF1O43719 755 aaKnown RBP18.85■□□□□ 0.61
UBE3A-207ENST00000614096 IRX6P78412 446 aaPredicted RBP18.85■□□□□ 0.61
UBE3A-207ENST00000614096 A0A0U1RQG5 324 aaPredicted RBP18.84■□□□□ 0.61
UBE3A-207ENST00000614096 CCDC34Q96HJ3 373 aa18.83■□□□□ 0.61
UBE3A-207ENST00000614096 TPM4P67936 248 aa18.82■□□□□ 0.6
UBE3A-207ENST00000614096 GOLGA6L3A6NEY3 463 aa18.81■□□□□ 0.6
UBE3A-207ENST00000614096 SUPT16HQ9Y5B9 1047 aaKnown RBP18.79■□□□□ 0.6
UBE3A-207ENST00000614096 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
UBE3A-207ENST00000614096 CSPP1Q1MSJ5 1256 aa18.78■□□□□ 0.6
UBE3A-207ENST00000614096 KCNJ4P48050 445 aa18.77■□□□□ 0.6
UBE3A-207ENST00000614096 GPS2Q13227 327 aa18.75■□□□□ 0.59
UBE3A-207ENST00000614096 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
UBE3A-207ENST00000614096 KNSTRNQ9Y448 316 aa18.74■□□□□ 0.59
UBE3A-207ENST00000614096 HAP1P54257 671 aaPredicted RBP18.72■□□□□ 0.59
UBE3A-207ENST00000614096 NOM1Q5C9Z4 860 aaKnown RBP18.68■□□□□ 0.58
UBE3A-207ENST00000614096 CHGAP10645 457 aaKnown RBP18.67■□□□□ 0.58
UBE3A-207ENST00000614096 KAT6BQ8WYB5 2073 aa18.66■□□□□ 0.58
UBE3A-207ENST00000614096 GNL2Q13823 731 aaKnown RBP18.66■□□□□ 0.58
UBE3A-207ENST00000614096 TEX35Q5T0J7 233 aa18.66■□□□□ 0.58
UBE3A-207ENST00000614096 RGS3P49796 1198 aa18.66■□□□□ 0.58
UBE3A-207ENST00000614096 MTERF4Q7Z6M4 381 aaKnown RBP18.65■□□□□ 0.58
UBE3A-207ENST00000614096 TPRNQ4KMQ1 711 aa18.65■□□□□ 0.58
UBE3A-207ENST00000614096 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.58
UBE3A-207ENST00000614096 CCDC70Q6NSX1 233 aa18.63■□□□□ 0.57
UBE3A-207ENST00000614096 RBM19Q9Y4C8 960 aaKnown RBP18.63■□□□□ 0.57
UBE3A-207ENST00000614096 NUDCQ9Y266 331 aa18.63■□□□□ 0.57
UBE3A-207ENST00000614096 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
UBE3A-207ENST00000614096 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.62■□□□□ 0.57
UBE3A-207ENST00000614096 TSPY4P0CV99 314 aa18.61■□□□□ 0.57
UBE3A-207ENST00000614096 TSPY10P0CW01 314 aa18.61■□□□□ 0.57
UBE3A-207ENST00000614096 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
UBE3A-207ENST00000614096 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
UBE3A-207ENST00000614096 OS9Q13438 667 aaPredicted RBP18.6■□□□□ 0.57
UBE3A-207ENST00000614096 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
UBE3A-207ENST00000614096 FBLN2P98095 1184 aa18.6■□□□□ 0.57
UBE3A-207ENST00000614096 DDX11L8A8MPP1 907 aa18.59■□□□□ 0.57
UBE3A-207ENST00000614096 GOLGA2Q08379 1002 aa18.59■□□□□ 0.57
UBE3A-207ENST00000614096 TULP1O00294 542 aaPredicted RBP18.58■□□□□ 0.56
UBE3A-207ENST00000614096 TPM3P06753 285 aa18.57■□□□□ 0.56
UBE3A-207ENST00000614096 NAP1L2Q9ULW6 460 aaPredicted RBP18.56■□□□□ 0.56
UBE3A-207ENST00000614096 MAP7D2Q96T17 732 aa18.55■□□□□ 0.56
UBE3A-207ENST00000614096 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
UBE3A-207ENST00000614096 EEA1Q15075 1411 aa18.53■□□□□ 0.56
UBE3A-207ENST00000614096 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
UBE3A-207ENST00000614096 SKOR2Q2VWA4 1001 aaPredicted RBP18.52■□□□□ 0.56
UBE3A-207ENST00000614096 KDM2AQ9Y2K7 1162 aa18.52■□□□□ 0.56
UBE3A-207ENST00000614096 ZNF771Q7L3S4 317 aaPredicted RBP18.52■□□□□ 0.56
UBE3A-207ENST00000614096 CCER2I3L3R5 266 aa18.52■□□□□ 0.55
UBE3A-207ENST00000614096 RRP12Q5JTH9 1297 aaKnown RBP18.52■□□□□ 0.55
UBE3A-207ENST00000614096 KIF3AQ9Y496 699 aa18.51■□□□□ 0.55
UBE3A-207ENST00000614096 APPP05067 770 aa18.51■□□□□ 0.55
UBE3A-207ENST00000614096 IPO8O15397 1037 aaKnown RBP18.5■□□□□ 0.55
UBE3A-207ENST00000614096 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
UBE3A-207ENST00000614096 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
UBE3A-207ENST00000614096 CHMP4AQ9BY43 222 aa18.5■□□□□ 0.55
UBE3A-207ENST00000614096 CLSTN1O94985 981 aa18.49■□□□□ 0.55
UBE3A-207ENST00000614096 TSR1Q2NL82 804 aaKnown RBP18.49■□□□□ 0.55
UBE3A-207ENST00000614096 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
UBE3A-207ENST00000614096 CEP89Q96ST8 783 aa18.49■□□□□ 0.55
UBE3A-207ENST00000614096 CHMP4CQ96CF2 233 aa18.48■□□□□ 0.55
UBE3A-207ENST00000614096 CWC15Q9P013 229 aaKnown RBP18.48■□□□□ 0.55
UBE3A-207ENST00000614096 HMMRO75330 724 aa18.48■□□□□ 0.55
UBE3A-207ENST00000614096 CLIP1P30622 1438 aa18.47■□□□□ 0.55
UBE3A-207ENST00000614096 FRAT1Q92837 279 aaPredicted RBP18.47■□□□□ 0.55
UBE3A-207ENST00000614096 ARID3AQ99856 593 aa18.46■□□□□ 0.55
UBE3A-207ENST00000614096 ATP6V1DQ9Y5K8 247 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms