RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 NUBP1P53384 320 aa16.64■□□□□ 0.25
FAM228B-205ENST00000611127 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
FAM228B-205ENST00000611127 FAM212AQ96EL1 285 aa16.61■□□□□ 0.25
FAM228B-205ENST00000611127 KLHL34Q8N239 644 aa16.59■□□□□ 0.25
FAM228B-205ENST00000611127 DCBLD2Q96PD2 775 aa16.58■□□□□ 0.24
FAM228B-205ENST00000611127 GALR2O43603 387 aaPredicted RBP16.55■□□□□ 0.24
FAM228B-205ENST00000611127 ABCC9O60706 1549 aa16.51■□□□□ 0.23
FAM228B-205ENST00000611127 KIF12Q96FN5 646 aa16.51■□□□□ 0.23
FAM228B-205ENST00000611127 SGIP1Q9BQI5 828 aa16.48■□□□□ 0.23
FAM228B-205ENST00000611127 MS4A3Q96HJ5 214 aa16.47■□□□□ 0.23
FAM228B-205ENST00000611127 POTEIP0CG38 1075 aa16.45■□□□□ 0.22
FAM228B-205ENST00000611127 IFNLR1Q8IU57 520 aaPredicted RBP16.45■□□□□ 0.22
FAM228B-205ENST00000611127 DCAF8Q5TAQ9 597 aa16.44■□□□□ 0.22
FAM228B-205ENST00000611127 GSE1Q14687 1217 aa16.43■□□□□ 0.22
FAM228B-205ENST00000611127 SPOCK2Q92563 424 aa16.42■□□□□ 0.22
FAM228B-205ENST00000611127 MAP3K13O43283 966 aa16.41■□□□□ 0.22
FAM228B-205ENST00000611127 ASTLQ6HA08 431 aaPredicted RBP16.35■□□□□ 0.21
FAM228B-205ENST00000611127 PCDHB13Q9Y5F0 798 aa16.35■□□□□ 0.21
FAM228B-205ENST00000611127 TIE1P35590 1138 aa16.3■□□□□ 0.2
FAM228B-205ENST00000611127 ATMINO43313 823 aaPredicted RBP16.27■□□□□ 0.2
FAM228B-205ENST00000611127 CHRM1P11229 460 aaPredicted RBP16.26■□□□□ 0.19
FAM228B-205ENST00000611127 PYGBP11216 843 aa16.24■□□□□ 0.19
FAM228B-205ENST00000611127 IFNL1Q8IU54 200 aa16.23■□□□□ 0.19
FAM228B-205ENST00000611127 LHX8Q68G74 356 aa16.22■□□□□ 0.19
FAM228B-205ENST00000611127 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.19
FAM228B-205ENST00000611127 SLC39A7Q92504 469 aa16.2■□□□□ 0.18
FAM228B-205ENST00000611127 C7P10643 843 aa16.19■□□□□ 0.18
FAM228B-205ENST00000611127 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
FAM228B-205ENST00000611127 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
FAM228B-205ENST00000611127 ZNF467Q7Z7K2 595 aaPredicted RBP16.18■□□□□ 0.18
FAM228B-205ENST00000611127 ATN1P54259 1190 aaPredicted RBP16.16■□□□□ 0.18
FAM228B-205ENST00000611127 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
FAM228B-205ENST00000611127 TRPC6Q9Y210 931 aa16.16■□□□□ 0.18
FAM228B-205ENST00000611127 TTLL13PA6NNM8 815 aa16.15■□□□□ 0.18
FAM228B-205ENST00000611127 METRNQ9UJH8 293 aa16.12■□□□□ 0.17
FAM228B-205ENST00000611127 TMEM106CQ9BVX2 250 aa16.08■□□□□ 0.16
FAM228B-205ENST00000611127 IER5LQ5T953 404 aa16.07■□□□□ 0.16
FAM228B-205ENST00000611127 PCDHB8Q9UN66 801 aa16.07■□□□□ 0.16
FAM228B-205ENST00000611127 TRIM35Q9UPQ4 493 aa16.04■□□□□ 0.16
FAM228B-205ENST00000611127 PDAP1Q13442 181 aaKnown RBP15.96■□□□□ 0.15
FAM228B-205ENST00000611127 SEC24BO95487 1268 aa15.94■□□□□ 0.14
FAM228B-205ENST00000611127 PSEN1P49768 467 aa15.93■□□□□ 0.14
FAM228B-205ENST00000611127 MAMSTRQ6ZN01 415 aa15.92■□□□□ 0.14
FAM228B-205ENST00000611127 POTEB2H3BUK9 544 aa15.89■□□□□ 0.13
FAM228B-205ENST00000611127 GOLGA2Q08379 1002 aa15.89■□□□□ 0.13
FAM228B-205ENST00000611127 POTEFA5A3E0 1075 aa15.86■□□□□ 0.13
FAM228B-205ENST00000611127 PLCG2P16885 1265 aa15.84■□□□□ 0.13
FAM228B-205ENST00000611127 RIOK3O14730 519 aaKnown RBP15.83■□□□□ 0.12
FAM228B-205ENST00000611127 COLQQ9Y215 455 aaPredicted RBP15.83■□□□□ 0.12
FAM228B-205ENST00000611127 IRX5P78411 483 aaPredicted RBP15.82■□□□□ 0.12
FAM228B-205ENST00000611127 TAOK2Q9UL54 1235 aa15.82■□□□□ 0.12
FAM228B-205ENST00000611127 MKRN3Q13064 507 aaKnown RBP15.81■□□□□ 0.12
FAM228B-205ENST00000611127 OTUD5Q96G74 571 aa15.81■□□□□ 0.12
FAM228B-205ENST00000611127 OCEL1Q9H607 264 aa15.81■□□□□ 0.12
FAM228B-205ENST00000611127 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
FAM228B-205ENST00000611127 SCUBE2Q9NQ36 999 aa15.8■□□□□ 0.12
FAM228B-205ENST00000611127 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
FAM228B-205ENST00000611127 VGFO15240 615 aaPredicted RBP15.77■□□□□ 0.12
FAM228B-205ENST00000611127 POTEJP0CG39 1038 aa15.75■□□□□ 0.11
FAM228B-205ENST00000611127 NACADO15069 1562 aa15.75■□□□□ 0.11
FAM228B-205ENST00000611127 ECM2O94769 699 aaPredicted RBP15.74■□□□□ 0.11
FAM228B-205ENST00000611127 RNF25Q96BH1 459 aaPredicted RBP15.74■□□□□ 0.11
FAM228B-205ENST00000611127 CABP2Q9NPB3 220 aa15.71■□□□□ 0.11
FAM228B-205ENST00000611127 PKD2Q13563 968 aa15.7■□□□□ 0.1
FAM228B-205ENST00000611127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.67■□□□□ 0.1
FAM228B-205ENST00000611127 ILDR1Q86SU0 546 aaPredicted RBP15.66■□□□□ 0.1
FAM228B-205ENST00000611127 PDCD7Q8N8D1 485 aaKnown RBP15.65■□□□□ 0.1
FAM228B-205ENST00000611127 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.64■□□□□ 0.09
FAM228B-205ENST00000611127 ZFP91Q96JP5 570 aaPredicted RBP15.64■□□□□ 0.09
FAM228B-205ENST00000611127 L3MBTL3Q96JM7 780 aaPredicted RBP15.63■□□□□ 0.09
FAM228B-205ENST00000611127 MYO15BQ96JP2 1530 aa15.62■□□□□ 0.09
FAM228B-205ENST00000611127 SOX12O15370 315 aa15.56■□□□□ 0.08
FAM228B-205ENST00000611127 EFCAB3Q8N7B9 438 aa15.56■□□□□ 0.08
FAM228B-205ENST00000611127 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
FAM228B-205ENST00000611127 RGL2O15211 777 aa15.53■□□□□ 0.08
FAM228B-205ENST00000611127 BCL11BQ9C0K0 894 aaPredicted RBP15.52■□□□□ 0.08
FAM228B-205ENST00000611127 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.52■□□□□ 0.08
FAM228B-205ENST00000611127 G3V3G9 751 aa15.49■□□□□ 0.07
FAM228B-205ENST00000611127 STK25O00506 426 aa15.49■□□□□ 0.07
FAM228B-205ENST00000611127 C3orf67Q6ZVT6 689 aa15.49■□□□□ 0.07
FAM228B-205ENST00000611127 SLAIN1Q8ND83 568 aa15.48■□□□□ 0.07
FAM228B-205ENST00000611127 STK24Q9Y6E0 443 aa15.48■□□□□ 0.07
FAM228B-205ENST00000611127 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
FAM228B-205ENST00000611127 BOLA1Q9Y3E2 137 aa15.43■□□□□ 0.06
FAM228B-205ENST00000611127 NLRP6P59044 892 aa15.41■□□□□ 0.06
FAM228B-205ENST00000611127 DPY19L2Q6NUT2 758 aa15.41■□□□□ 0.06
FAM228B-205ENST00000611127 SNPHO15079 494 aa15.37■□□□□ 0.05
FAM228B-205ENST00000611127 TMEM121BQ9BXQ6 578 aaPredicted RBP15.37■□□□□ 0.05
FAM228B-205ENST00000611127 PHF8Q9UPP1 1060 aa15.37■□□□□ 0.05
FAM228B-205ENST00000611127 HS6ST3Q8IZP7 471 aa15.33■□□□□ 0.04
FAM228B-205ENST00000611127 MS4A4AQ96JQ5 239 aa15.32■□□□□ 0.04
FAM228B-205ENST00000611127 FBXO22Q8NEZ5 403 aa15.31■□□□□ 0.04
FAM228B-205ENST00000611127 MFRPQ9BY79 579 aa15.3■□□□□ 0.04
FAM228B-205ENST00000611127 FAM163AQ96GL9 167 aaPredicted RBP15.29■□□□□ 0.04
FAM228B-205ENST00000611127 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
FAM228B-205ENST00000611127 MICALL2Q8IY33 904 aa15.28■□□□□ 0.04
FAM228B-205ENST00000611127 UNC13AQ9UPW8 1703 aa15.26■□□□□ 0.03
FAM228B-205ENST00000611127 DNAJC5Q9H3Z4 198 aa15.23■□□□□ 0.03
FAM228B-205ENST00000611127 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
FAM228B-205ENST00000611127 POTEMA6NI47 508 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms