RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 ARID4BQ4LE39 1312 aaPredicted RBP20.94■□□□□ 0.94
TNXB-208ENST00000611016 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.93■□□□□ 0.94
TNXB-208ENST00000611016 BAZ1BQ9UIG0 1483 aaKnown RBP20.92■□□□□ 0.94
TNXB-208ENST00000611016 HIRIP3Q9BW71 556 aaPredicted RBP20.91■□□□□ 0.94
TNXB-208ENST00000611016 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
TNXB-208ENST00000611016 MRS2Q9HD23 443 aa20.9■□□□□ 0.94
TNXB-208ENST00000611016 RGL3Q3MIN7 710 aa20.88■□□□□ 0.93
TNXB-208ENST00000611016 ERCC6Q03468 1493 aa20.87■□□□□ 0.93
TNXB-208ENST00000611016 CFDP1Q9UEE9 299 aaPredicted RBP20.84■□□□□ 0.93
TNXB-208ENST00000611016 EIF4G2P78344 907 aaKnown RBP eCLIP20.83■□□□□ 0.93
TNXB-208ENST00000611016 GOLGA3Q08378 1498 aa20.83■□□□□ 0.92
TNXB-208ENST00000611016 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
TNXB-208ENST00000611016 EEA1Q15075 1411 aa20.82■□□□□ 0.92
TNXB-208ENST00000611016 NACADO15069 1562 aa20.82■□□□□ 0.92
TNXB-208ENST00000611016 CCDC136Q96JN2 1154 aa20.81■□□□□ 0.92
TNXB-208ENST00000611016 KIF27Q86VH2 1401 aa20.78■□□□□ 0.92
TNXB-208ENST00000611016 HAP1P54257 671 aaPredicted RBP20.77■□□□□ 0.92
TNXB-208ENST00000611016 CEP162Q5TB80 1403 aa20.75■□□□□ 0.91
TNXB-208ENST00000611016 MYH16Q9H6N6 1097 aa20.73■□□□□ 0.91
TNXB-208ENST00000611016 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
TNXB-208ENST00000611016 IRX6P78412 446 aaPredicted RBP20.66■□□□□ 0.9
TNXB-208ENST00000611016 CFAP53Q96M91 514 aa20.64■□□□□ 0.89
TNXB-208ENST00000611016 CDCA8Q53HL2 280 aa20.63■□□□□ 0.89
TNXB-208ENST00000611016 MIER1Q8N108 512 aa20.62■□□□□ 0.89
TNXB-208ENST00000611016 CARD11Q9BXL7 1154 aa20.62■□□□□ 0.89
TNXB-208ENST00000611016 KNSTRNQ9Y448 316 aa20.62■□□□□ 0.89
TNXB-208ENST00000611016 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
TNXB-208ENST00000611016 ARXQ96QS3 562 aa20.61■□□□□ 0.89
TNXB-208ENST00000611016 LMOD2Q6P5Q4 547 aa20.61■□□□□ 0.89
TNXB-208ENST00000611016 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
TNXB-208ENST00000611016 POGKQ9P215 609 aa20.6■□□□□ 0.89
TNXB-208ENST00000611016 EIF5BO60841 1220 aaKnown RBP20.59■□□□□ 0.89
TNXB-208ENST00000611016 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.89
TNXB-208ENST00000611016 EIF4G1Q04637 1599 aaKnown RBP20.56■□□□□ 0.88
TNXB-208ENST00000611016 TNIKQ9UKE5 1360 aa20.55■□□□□ 0.88
TNXB-208ENST00000611016 GLIPR1L2Q4G1C9 344 aa20.54■□□□□ 0.88
TNXB-208ENST00000611016 CCNB3Q8WWL7 1395 aa20.53■□□□□ 0.88
TNXB-208ENST00000611016 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
TNXB-208ENST00000611016 MLECQ14165 292 aa20.52■□□□□ 0.88
TNXB-208ENST00000611016 ANP32EQ9BTT0 268 aa20.52■□□□□ 0.88
TNXB-208ENST00000611016 DDRGK1Q96HY6 314 aa20.51■□□□□ 0.87
TNXB-208ENST00000611016 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
TNXB-208ENST00000611016 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
TNXB-208ENST00000611016 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
TNXB-208ENST00000611016 BECN1Q14457 450 aa20.47■□□□□ 0.87
TNXB-208ENST00000611016 TNNT2P45379 298 aaPredicted RBP20.47■□□□□ 0.87
TNXB-208ENST00000611016 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
TNXB-208ENST00000611016 CUX2O14529 1486 aa20.46■□□□□ 0.87
TNXB-208ENST00000611016 CARMIL1Q5VZK9 1371 aa20.46■□□□□ 0.87
TNXB-208ENST00000611016 SIN3AQ96ST3 1273 aa20.46■□□□□ 0.87
TNXB-208ENST00000611016 NBR1Q14596 966 aa20.45■□□□□ 0.86
TNXB-208ENST00000611016 NUDCQ9Y266 331 aa20.44■□□□□ 0.86
TNXB-208ENST00000611016 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
TNXB-208ENST00000611016 KANK1Q14678 1352 aa20.42■□□□□ 0.86
TNXB-208ENST00000611016 FTSJ3Q8IY81 847 aaKnown RBP20.41■□□□□ 0.86
TNXB-208ENST00000611016 FHAD1B1AJZ9 1412 aa20.4■□□□□ 0.86
TNXB-208ENST00000611016 CC2D1BQ5T0F9 858 aaKnown RBP20.39■□□□□ 0.85
TNXB-208ENST00000611016 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
TNXB-208ENST00000611016 NCLP19338 710 aaKnown RBP20.38■□□□□ 0.85
TNXB-208ENST00000611016 HDGFP51858 240 aaKnown RBP20.37■□□□□ 0.85
TNXB-208ENST00000611016 NPHP1O15259 732 aa20.36■□□□□ 0.85
TNXB-208ENST00000611016 GOLGA6L22H0YM25 854 aa20.36■□□□□ 0.85
TNXB-208ENST00000611016 U2SURPO15042 1029 aaKnown RBP20.36■□□□□ 0.85
TNXB-208ENST00000611016 CDK11BP21127 795 aaKnown RBP20.35■□□□□ 0.85
TNXB-208ENST00000611016 GGT6Q6P531 493 aa20.35■□□□□ 0.85
TNXB-208ENST00000611016 SOX12O15370 315 aa20.33■□□□□ 0.84
TNXB-208ENST00000611016 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
TNXB-208ENST00000611016 SAFB2Q14151 953 aaKnown RBP eCLIP20.31■□□□□ 0.84
TNXB-208ENST00000611016 SRPK2P78362 688 aaKnown RBP20.31■□□□□ 0.84
TNXB-208ENST00000611016 CASC1Q6TDU7 716 aa20.31■□□□□ 0.84
TNXB-208ENST00000611016 TMF1P82094 1093 aa20.31■□□□□ 0.84
TNXB-208ENST00000611016 SOGA1O94964 1423 aa20.3■□□□□ 0.84
TNXB-208ENST00000611016 FRAT1Q92837 279 aaPredicted RBP20.29■□□□□ 0.84
TNXB-208ENST00000611016 SUPT16HQ9Y5B9 1047 aaKnown RBP20.26■□□□□ 0.83
TNXB-208ENST00000611016 CARMIL2Q6F5E8 1435 aa20.26■□□□□ 0.83
TNXB-208ENST00000611016 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
TNXB-208ENST00000611016 MS4A1P11836 297 aa20.25■□□□□ 0.83
TNXB-208ENST00000611016 PNNQ9H307 717 aaKnown RBP20.24■□□□□ 0.83
TNXB-208ENST00000611016 STK26Q9P289 416 aa20.24■□□□□ 0.83
TNXB-208ENST00000611016 OS9Q13438 667 aaPredicted RBP20.22■□□□□ 0.83
TNXB-208ENST00000611016 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
TNXB-208ENST00000611016 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
TNXB-208ENST00000611016 TPRNQ4KMQ1 711 aa20.19■□□□□ 0.82
TNXB-208ENST00000611016 TRIM44Q96DX7 344 aaPredicted RBP20.19■□□□□ 0.82
TNXB-208ENST00000611016 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
TNXB-208ENST00000611016 PKD2Q13563 968 aa20.19■□□□□ 0.82
TNXB-208ENST00000611016 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
TNXB-208ENST00000611016 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
TNXB-208ENST00000611016 TAOK2Q9UL54 1235 aa20.16■□□□□ 0.82
TNXB-208ENST00000611016 FOXD1Q16676 465 aa20.16■□□□□ 0.82
TNXB-208ENST00000611016 SMARCA2P51531 1590 aa20.16■□□□□ 0.82
TNXB-208ENST00000611016 RGS3P49796 1198 aa20.15■□□□□ 0.82
TNXB-208ENST00000611016 ZRSR1Q15695 479 aaKnown RBP20.15■□□□□ 0.82
TNXB-208ENST00000611016 TULP1O00294 542 aaPredicted RBP20.15■□□□□ 0.82
TNXB-208ENST00000611016 EFCAB2Q5VUJ9 269 aa20.14■□□□□ 0.82
TNXB-208ENST00000611016 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
TNXB-208ENST00000611016 ABCC8Q09428 1581 aa20.13■□□□□ 0.81
TNXB-208ENST00000611016 PAK3O75914 559 aaPredicted RBP20.13■□□□□ 0.81
TNXB-208ENST00000611016 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
TNXB-208ENST00000611016 SETD5Q9C0A6 1442 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms