RNA–Protein interactions for RNA: ENST00000610229.1

AC004448.4-210, humanhuman

TSL 5 BASIC

Gene AC004448.4, Length 833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.4-210ENST00000610229 EEA1Q15075 1411 aa11.7□□□□□ -0.54
AC004448.4-210ENST00000610229 CUX2O14529 1486 aa11.69□□□□□ -0.54
AC004448.4-210ENST00000610229 ERCC6Q03468 1493 aa11.69□□□□□ -0.54
AC004448.4-210ENST00000610229 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
AC004448.4-210ENST00000610229 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
AC004448.4-210ENST00000610229 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
AC004448.4-210ENST00000610229 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
AC004448.4-210ENST00000610229 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
AC004448.4-210ENST00000610229 MIER1Q8N108 512 aa11.57□□□□□ -0.56
AC004448.4-210ENST00000610229 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
AC004448.4-210ENST00000610229 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
AC004448.4-210ENST00000610229 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
AC004448.4-210ENST00000610229 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
AC004448.4-210ENST00000610229 WRNQ14191 1432 aaPredicted RBP eCLIP11.54□□□□□ -0.56
AC004448.4-210ENST00000610229 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
AC004448.4-210ENST00000610229 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
AC004448.4-210ENST00000610229 ABCC8Q09428 1581 aa11.51□□□□□ -0.57
AC004448.4-210ENST00000610229 SPOCK2Q92563 424 aa11.51□□□□□ -0.57
AC004448.4-210ENST00000610229 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
AC004448.4-210ENST00000610229 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
AC004448.4-210ENST00000610229 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
AC004448.4-210ENST00000610229 TRIM26Q12899 539 aaPredicted RBP11.47□□□□□ -0.57
AC004448.4-210ENST00000610229 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
AC004448.4-210ENST00000610229 TOP2BQ02880 1626 aa11.46□□□□□ -0.58
AC004448.4-210ENST00000610229 GOLGA3Q08378 1498 aa11.45□□□□□ -0.58
AC004448.4-210ENST00000610229 KIF21BO75037 1637 aa11.45□□□□□ -0.58
AC004448.4-210ENST00000610229 FAM9AQ8IZU1 332 aaPredicted RBP11.44□□□□□ -0.58
AC004448.4-210ENST00000610229 CEP164Q9UPV0 1460 aa11.44□□□□□ -0.58
AC004448.4-210ENST00000610229 PDS5BQ9NTI5 1447 aa11.43□□□□□ -0.58
AC004448.4-210ENST00000610229 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
AC004448.4-210ENST00000610229 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
AC004448.4-210ENST00000610229 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
AC004448.4-210ENST00000610229 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
AC004448.4-210ENST00000610229 PKD2Q13563 968 aa11.4□□□□□ -0.58
AC004448.4-210ENST00000610229 CFTRP13569 1480 aa11.39□□□□□ -0.59
AC004448.4-210ENST00000610229 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
AC004448.4-210ENST00000610229 PCGF6Q9BYE7 350 aa11.38□□□□□ -0.59
AC004448.4-210ENST00000610229 WDR62O43379 1518 aa11.38□□□□□ -0.59
AC004448.4-210ENST00000610229 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
AC004448.4-210ENST00000610229 ZEB1P37275 1124 aaPredicted RBP11.36□□□□□ -0.59
AC004448.4-210ENST00000610229 HRCP23327 699 aa11.34□□□□□ -0.59
AC004448.4-210ENST00000610229 CREBZFQ9NS37 354 aa11.34□□□□□ -0.59
AC004448.4-210ENST00000610229 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
AC004448.4-210ENST00000610229 CEP162Q5TB80 1403 aa11.33□□□□□ -0.6
AC004448.4-210ENST00000610229 SOGA1O94964 1423 aa11.32□□□□□ -0.6
AC004448.4-210ENST00000610229 FANCD2Q9BXW9 1451 aa11.31□□□□□ -0.6
AC004448.4-210ENST00000610229 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
AC004448.4-210ENST00000610229 UBTFP17480 764 aaKnown RBP11.29□□□□□ -0.6
AC004448.4-210ENST00000610229 KIF27Q86VH2 1401 aa11.28□□□□□ -0.6
AC004448.4-210ENST00000610229 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
AC004448.4-210ENST00000610229 URB2Q14146 1524 aaKnown RBP11.26□□□□□ -0.61
AC004448.4-210ENST00000610229 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
AC004448.4-210ENST00000610229 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
AC004448.4-210ENST00000610229 NUBP1P53384 320 aa11.24□□□□□ -0.61
AC004448.4-210ENST00000610229 CUX1P39880 1505 aa11.24□□□□□ -0.61
AC004448.4-210ENST00000610229 GSE1Q14687 1217 aa11.22□□□□□ -0.61
AC004448.4-210ENST00000610229 DNMBPQ6XZF7 1577 aa11.2□□□□□ -0.62
AC004448.4-210ENST00000610229 CLIP1P30622 1438 aa11.2□□□□□ -0.62
AC004448.4-210ENST00000610229 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
AC004448.4-210ENST00000610229 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
AC004448.4-210ENST00000610229 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
AC004448.4-210ENST00000610229 VPS8Q8N3P4 1428 aa11.17□□□□□ -0.62
AC004448.4-210ENST00000610229 RGL2O15211 777 aa11.16□□□□□ -0.62
AC004448.4-210ENST00000610229 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
AC004448.4-210ENST00000610229 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
AC004448.4-210ENST00000610229 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
AC004448.4-210ENST00000610229 CUL7Q14999 1698 aa11.15□□□□□ -0.62
AC004448.4-210ENST00000610229 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
AC004448.4-210ENST00000610229 RAPGEF2Q9Y4G8 1499 aa11.13□□□□□ -0.63
AC004448.4-210ENST00000610229 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.63
AC004448.4-210ENST00000610229 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
AC004448.4-210ENST00000610229 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
AC004448.4-210ENST00000610229 TOPBP1Q92547 1522 aa11.11□□□□□ -0.63
AC004448.4-210ENST00000610229 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
AC004448.4-210ENST00000610229 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
AC004448.4-210ENST00000610229 ABCA10Q8WWZ4 1543 aa11.09□□□□□ -0.63
AC004448.4-210ENST00000610229 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
AC004448.4-210ENST00000610229 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
AC004448.4-210ENST00000610229 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
AC004448.4-210ENST00000610229 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
AC004448.4-210ENST00000610229 IFT140Q96RY7 1462 aa11.08□□□□□ -0.64
AC004448.4-210ENST00000610229 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
AC004448.4-210ENST00000610229 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
AC004448.4-210ENST00000610229 TARBP1Q13395 1621 aaKnown RBP11.05□□□□□ -0.64
AC004448.4-210ENST00000610229 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
AC004448.4-210ENST00000610229 CHD1O14646 1710 aa11.04□□□□□ -0.64
AC004448.4-210ENST00000610229 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
AC004448.4-210ENST00000610229 CTTNBP2Q8WZ74 1663 aa11.04□□□□□ -0.64
AC004448.4-210ENST00000610229 FHAD1B1AJZ9 1412 aa11.03□□□□□ -0.64
AC004448.4-210ENST00000610229 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
AC004448.4-210ENST00000610229 CARMIL1Q5VZK9 1371 aa11.03□□□□□ -0.64
AC004448.4-210ENST00000610229 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
AC004448.4-210ENST00000610229 CHRM1P11229 460 aaPredicted RBP11.02□□□□□ -0.65
AC004448.4-210ENST00000610229 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
AC004448.4-210ENST00000610229 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
AC004448.4-210ENST00000610229 ARHGEF11O15085 1522 aa11.02□□□□□ -0.65
AC004448.4-210ENST00000610229 MAP3K1Q13233 1512 aa11.02□□□□□ -0.65
AC004448.4-210ENST00000610229 AQRO60306 1485 aaKnown RBP eCLIP11.01□□□□□ -0.65
AC004448.4-210ENST00000610229 IGF1RP08069 1367 aa11□□□□□ -0.65
AC004448.4-210ENST00000610229 RIOK3O14730 519 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms