RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 PHF12Q96QT6 1004 aa18.49■□□□□ 0.55
CSNK1A1-209ENST00000606299 NUBP1P53384 320 aa18.46■□□□□ 0.55
CSNK1A1-209ENST00000606299 CCDC61Q9Y6R9 512 aa18.44■□□□□ 0.54
CSNK1A1-209ENST00000606299 FAM212AQ96EL1 285 aa18.39■□□□□ 0.53
CSNK1A1-209ENST00000606299 KLHL34Q8N239 644 aa18.38■□□□□ 0.53
CSNK1A1-209ENST00000606299 GALR2O43603 387 aaPredicted RBP18.36■□□□□ 0.53
CSNK1A1-209ENST00000606299 ABCC9O60706 1549 aa18.32■□□□□ 0.52
CSNK1A1-209ENST00000606299 DCBLD2Q96PD2 775 aa18.31■□□□□ 0.52
CSNK1A1-209ENST00000606299 DCAF1Q9Y4B6 1507 aa18.3■□□□□ 0.52
CSNK1A1-209ENST00000606299 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
CSNK1A1-209ENST00000606299 KIF12Q96FN5 646 aa18.29■□□□□ 0.52
CSNK1A1-209ENST00000606299 MS4A3Q96HJ5 214 aa18.28■□□□□ 0.52
CSNK1A1-209ENST00000606299 IFNLR1Q8IU57 520 aaPredicted RBP18.27■□□□□ 0.52
CSNK1A1-209ENST00000606299 POTEIP0CG38 1075 aa18.25■□□□□ 0.51
CSNK1A1-209ENST00000606299 DCAF8Q5TAQ9 597 aa18.2■□□□□ 0.5
CSNK1A1-209ENST00000606299 SPOCK2Q92563 424 aa18.2■□□□□ 0.5
CSNK1A1-209ENST00000606299 SGIP1Q9BQI5 828 aa18.19■□□□□ 0.5
CSNK1A1-209ENST00000606299 MAP3K13O43283 966 aa18.18■□□□□ 0.5
CSNK1A1-209ENST00000606299 GSE1Q14687 1217 aa18.18■□□□□ 0.5
CSNK1A1-209ENST00000606299 SHROOM4Q9ULL8 1493 aa18.13■□□□□ 0.49
CSNK1A1-209ENST00000606299 PCDHB13Q9Y5F0 798 aa18.1■□□□□ 0.49
CSNK1A1-209ENST00000606299 ASTLQ6HA08 431 aaPredicted RBP18.08■□□□□ 0.48
CSNK1A1-209ENST00000606299 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
CSNK1A1-209ENST00000606299 NACADO15069 1562 aa18.04■□□□□ 0.48
CSNK1A1-209ENST00000606299 TIE1P35590 1138 aa18.03■□□□□ 0.48
CSNK1A1-209ENST00000606299 ATMINO43313 823 aaPredicted RBP18.02■□□□□ 0.48
CSNK1A1-209ENST00000606299 PYGBP11216 843 aa18.02■□□□□ 0.48
CSNK1A1-209ENST00000606299 IFNL1Q8IU54 200 aa17.99■□□□□ 0.47
CSNK1A1-209ENST00000606299 BMP2KQ9NSY1 1161 aaPredicted RBP17.98■□□□□ 0.47
CSNK1A1-209ENST00000606299 TRPC6Q9Y210 931 aa17.98■□□□□ 0.47
CSNK1A1-209ENST00000606299 CHRM1P11229 460 aaPredicted RBP17.97■□□□□ 0.47
CSNK1A1-209ENST00000606299 CIZ1Q9ULV3 898 aaPredicted RBP17.95■□□□□ 0.46
CSNK1A1-209ENST00000606299 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
CSNK1A1-209ENST00000606299 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
CSNK1A1-209ENST00000606299 LHX8Q68G74 356 aa17.92■□□□□ 0.46
CSNK1A1-209ENST00000606299 ATN1P54259 1190 aaPredicted RBP17.91■□□□□ 0.46
CSNK1A1-209ENST00000606299 SLC39A7Q92504 469 aa17.91■□□□□ 0.46
CSNK1A1-209ENST00000606299 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
CSNK1A1-209ENST00000606299 TTLL13PA6NNM8 815 aa17.9■□□□□ 0.46
CSNK1A1-209ENST00000606299 ZNF467Q7Z7K2 595 aaPredicted RBP17.89■□□□□ 0.45
CSNK1A1-209ENST00000606299 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
CSNK1A1-209ENST00000606299 C7P10643 843 aa17.87■□□□□ 0.45
CSNK1A1-209ENST00000606299 METRNQ9UJH8 293 aa17.85■□□□□ 0.45
CSNK1A1-209ENST00000606299 PCDHB8Q9UN66 801 aa17.83■□□□□ 0.44
CSNK1A1-209ENST00000606299 TMEM106CQ9BVX2 250 aa17.82■□□□□ 0.44
CSNK1A1-209ENST00000606299 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
CSNK1A1-209ENST00000606299 TRIM35Q9UPQ4 493 aa17.78■□□□□ 0.44
CSNK1A1-209ENST00000606299 IER5LQ5T953 404 aa17.75■□□□□ 0.43
CSNK1A1-209ENST00000606299 PDAP1Q13442 181 aaKnown RBP17.68■□□□□ 0.42
CSNK1A1-209ENST00000606299 PSEN1P49768 467 aa17.66■□□□□ 0.42
CSNK1A1-209ENST00000606299 POTEB2H3BUK9 544 aa17.64■□□□□ 0.41
CSNK1A1-209ENST00000606299 SEC24BO95487 1268 aa17.62■□□□□ 0.41
CSNK1A1-209ENST00000606299 POTEFA5A3E0 1075 aa17.6■□□□□ 0.41
CSNK1A1-209ENST00000606299 COLQQ9Y215 455 aaPredicted RBP17.57■□□□□ 0.4
CSNK1A1-209ENST00000606299 RIOK3O14730 519 aaKnown RBP17.55■□□□□ 0.4
CSNK1A1-209ENST00000606299 PLCG2P16885 1265 aa17.54■□□□□ 0.4
CSNK1A1-209ENST00000606299 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
CSNK1A1-209ENST00000606299 MAMSTRQ6ZN01 415 aa17.54■□□□□ 0.4
CSNK1A1-209ENST00000606299 IRX5P78411 483 aaPredicted RBP17.53■□□□□ 0.4
CSNK1A1-209ENST00000606299 RNF25Q96BH1 459 aaPredicted RBP17.52■□□□□ 0.4
CSNK1A1-209ENST00000606299 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
CSNK1A1-209ENST00000606299 MKRN3Q13064 507 aaKnown RBP17.49■□□□□ 0.39
CSNK1A1-209ENST00000606299 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
CSNK1A1-209ENST00000606299 OCEL1Q9H607 264 aa17.48■□□□□ 0.39
CSNK1A1-209ENST00000606299 VGFO15240 615 aaPredicted RBP17.47■□□□□ 0.39
CSNK1A1-209ENST00000606299 ECM2O94769 699 aaPredicted RBP17.46■□□□□ 0.39
CSNK1A1-209ENST00000606299 PKD2Q13563 968 aa17.46■□□□□ 0.39
CSNK1A1-209ENST00000606299 SCUBE2Q9NQ36 999 aa17.45■□□□□ 0.38
CSNK1A1-209ENST00000606299 TAOK2Q9UL54 1235 aa17.44■□□□□ 0.38
CSNK1A1-209ENST00000606299 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
CSNK1A1-209ENST00000606299 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
CSNK1A1-209ENST00000606299 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
CSNK1A1-209ENST00000606299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.36■□□□□ 0.37
CSNK1A1-209ENST00000606299 PDCD7Q8N8D1 485 aaKnown RBP17.36■□□□□ 0.37
CSNK1A1-209ENST00000606299 ZFP91Q96JP5 570 aaPredicted RBP17.36■□□□□ 0.37
CSNK1A1-209ENST00000606299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.372e-13■■■□□ 17.3
CSNK1A1-209ENST00000606299 ILDR1Q86SU0 546 aaPredicted RBP17.35■□□□□ 0.37
CSNK1A1-209ENST00000606299 RGL2O15211 777 aa17.28■□□□□ 0.36
CSNK1A1-209ENST00000606299 EFCAB3Q8N7B9 438 aa17.26■□□□□ 0.35
CSNK1A1-209ENST00000606299 L3MBTL3Q96JM7 780 aaPredicted RBP17.25■□□□□ 0.35
CSNK1A1-209ENST00000606299 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
CSNK1A1-209ENST00000606299 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
CSNK1A1-209ENST00000606299 SOX12O15370 315 aa17.2■□□□□ 0.34
CSNK1A1-209ENST00000606299 STK25O00506 426 aa17.18■□□□□ 0.34
CSNK1A1-209ENST00000606299 STK24Q9Y6E0 443 aa17.17■□□□□ 0.34
CSNK1A1-209ENST00000606299 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
CSNK1A1-209ENST00000606299 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.15■□□□□ 0.34
CSNK1A1-209ENST00000606299 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
CSNK1A1-209ENST00000606299 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
CSNK1A1-209ENST00000606299 C3orf67Q6ZVT6 689 aa17.13■□□□□ 0.33
CSNK1A1-209ENST00000606299 SLAIN1Q8ND83 568 aa17.13■□□□□ 0.33
CSNK1A1-209ENST00000606299 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
CSNK1A1-209ENST00000606299 WIZO95785 1651 aa17.12■□□□□ 0.33
CSNK1A1-209ENST00000606299 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
CSNK1A1-209ENST00000606299 G3V3G9 751 aa17.1■□□□□ 0.33
CSNK1A1-209ENST00000606299 BOLA1Q9Y3E2 137 aa17.1■□□□□ 0.33
CSNK1A1-209ENST00000606299 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
CSNK1A1-209ENST00000606299 NLRP6P59044 892 aa17.05■□□□□ 0.32
CSNK1A1-209ENST00000606299 MS4A4AQ96JQ5 239 aa17.03■□□□□ 0.32
CSNK1A1-209ENST00000606299 TMEM121BQ9BXQ6 578 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms