RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 KLHL34Q8N239 644 aa15.1■□□□□ 0.01
SH3D19-213ENST00000604922 PAK3O75914 559 aaPredicted RBP15.02■□□□□ -0
SH3D19-213ENST00000604922 IFNLR1Q8IU57 520 aaPredicted RBP15□□□□□ -0.01
SH3D19-213ENST00000604922 PCDH10Q9P2E7 1040 aa14.96□□□□□ -0.01
SH3D19-213ENST00000604922 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
SH3D19-213ENST00000604922 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
SH3D19-213ENST00000604922 NUBP1P53384 320 aa14.91□□□□□ -0.02
SH3D19-213ENST00000604922 SPOCK2Q92563 424 aa14.91□□□□□ -0.02
SH3D19-213ENST00000604922 TSPYL2Q9H2G4 693 aaPredicted RBP14.9□□□□□ -0.02
SH3D19-213ENST00000604922 RASEFQ8IZ41 740 aa14.89□□□□□ -0.03
SH3D19-213ENST00000604922 GALR2O43603 387 aaPredicted RBP14.88□□□□□ -0.03
SH3D19-213ENST00000604922 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
SH3D19-213ENST00000604922 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.04
SH3D19-213ENST00000604922 GSE1Q14687 1217 aa14.79□□□□□ -0.04
SH3D19-213ENST00000604922 LCE2DQ5TA82 110 aaPredicted RBP14.78□□□□□ -0.04
SH3D19-213ENST00000604922 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
SH3D19-213ENST00000604922 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
SH3D19-213ENST00000604922 PHF12Q96QT6 1004 aa14.73□□□□□ -0.05
SH3D19-213ENST00000604922 POTEJP0CG39 1038 aa14.72□□□□□ -0.05
SH3D19-213ENST00000604922 CIZ1Q9ULV3 898 aaPredicted RBP14.72□□□□□ -0.05
SH3D19-213ENST00000604922 KIF12Q96FN5 646 aa14.63□□□□□ -0.07
SH3D19-213ENST00000604922 PYGBP11216 843 aa14.61□□□□□ -0.07
SH3D19-213ENST00000604922 FAM163AQ96GL9 167 aaPredicted RBP14.61□□□□□ -0.07
SH3D19-213ENST00000604922 MAP3K13O43283 966 aa14.59□□□□□ -0.07
SH3D19-213ENST00000604922 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
SH3D19-213ENST00000604922 SGIP1Q9BQI5 828 aa14.58□□□□□ -0.08
SH3D19-213ENST00000604922 PCDHB13Q9Y5F0 798 aa14.56□□□□□ -0.08
SH3D19-213ENST00000604922 CHRM1P11229 460 aaPredicted RBP14.55□□□□□ -0.08
SH3D19-213ENST00000604922 MS4A3Q96HJ5 214 aa14.55□□□□□ -0.08
SH3D19-213ENST00000604922 METRNQ9UJH8 293 aa14.54□□□□□ -0.08
SH3D19-213ENST00000604922 MAMSTRQ6ZN01 415 aa14.48□□□□□ -0.09
SH3D19-213ENST00000604922 ASTLQ6HA08 431 aaPredicted RBP14.46□□□□□ -0.09
SH3D19-213ENST00000604922 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.09
SH3D19-213ENST00000604922 IFNL1Q8IU54 200 aa14.46□□□□□ -0.09
SH3D19-213ENST00000604922 C7P10643 843 aa14.45□□□□□ -0.1
SH3D19-213ENST00000604922 ATMINO43313 823 aaPredicted RBP14.42□□□□□ -0.1
SH3D19-213ENST00000604922 ECM2O94769 699 aaPredicted RBP14.42□□□□□ -0.1
SH3D19-213ENST00000604922 SLC39A7Q92504 469 aa14.42□□□□□ -0.1
SH3D19-213ENST00000604922 PKD2Q13563 968 aa14.41□□□□□ -0.1
SH3D19-213ENST00000604922 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
SH3D19-213ENST00000604922 CDAN1Q8IWY9 1227 aa14.39□□□□□ -0.11
SH3D19-213ENST00000604922 TIE1P35590 1138 aa14.38□□□□□ -0.11
SH3D19-213ENST00000604922 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
SH3D19-213ENST00000604922 SCUBE2Q9NQ36 999 aa14.34□□□□□ -0.11
SH3D19-213ENST00000604922 BMP2KQ9NSY1 1161 aaPredicted RBP14.32□□□□□ -0.12
SH3D19-213ENST00000604922 RIOK3O14730 519 aaKnown RBP14.31□□□□□ -0.12
SH3D19-213ENST00000604922 TMEM106CQ9BVX2 250 aa14.31□□□□□ -0.12
SH3D19-213ENST00000604922 PDAP1Q13442 181 aaKnown RBP14.3□□□□□ -0.12
SH3D19-213ENST00000604922 TAOK2Q9UL54 1235 aa14.3□□□□□ -0.12
SH3D19-213ENST00000604922 TTLL13PA6NNM8 815 aa14.29□□□□□ -0.12
SH3D19-213ENST00000604922 PSEN1P49768 467 aa14.28□□□□□ -0.12
SH3D19-213ENST00000604922 AMER1Q5JTC6 1135 aaPredicted RBP14.27□□□□□ -0.13
SH3D19-213ENST00000604922 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
SH3D19-213ENST00000604922 ATN1P54259 1190 aaPredicted RBP14.26□□□□□ -0.13
SH3D19-213ENST00000604922 RNF25Q96BH1 459 aaPredicted RBP14.26□□□□□ -0.13
SH3D19-213ENST00000604922 VGFO15240 615 aaPredicted RBP14.24□□□□□ -0.13
SH3D19-213ENST00000604922 RGL2O15211 777 aa14.23□□□□□ -0.13
SH3D19-213ENST00000604922 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
SH3D19-213ENST00000604922 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
SH3D19-213ENST00000604922 MMRN1Q13201 1228 aa14.16□□□□□ -0.14
SH3D19-213ENST00000604922 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.15□□□□□ -0.14
SH3D19-213ENST00000604922 ZFP91Q96JP5 570 aaPredicted RBP14.15□□□□□ -0.14
SH3D19-213ENST00000604922 RTN4Q9NQC3 1192 aaKnown RBP14.14□□□□□ -0.15
SH3D19-213ENST00000604922 IER5LQ5T953 404 aa14.12□□□□□ -0.15
SH3D19-213ENST00000604922 MKRN3Q13064 507 aaKnown RBP14.11□□□□□ -0.15
SH3D19-213ENST00000604922 CABP2Q9NPB3 220 aa14.11□□□□□ -0.15
SH3D19-213ENST00000604922 SEC24BO95487 1268 aa14.09□□□□□ -0.15
SH3D19-213ENST00000604922 SPNS2Q8IVW8 549 aa14.09□□□□□ -0.15
SH3D19-213ENST00000604922 STK25O00506 426 aa14.08□□□□□ -0.16
SH3D19-213ENST00000604922 DCAF8L2P0C7V8 631 aa14.07□□□□□ -0.16
SH3D19-213ENST00000604922 BCL11BQ9C0K0 894 aaPredicted RBP14.06□□□□□ -0.16
SH3D19-213ENST00000604922 STK24Q9Y6E0 443 aa14.06□□□□□ -0.16
SH3D19-213ENST00000604922 ST18O60284 1047 aa14.04□□□□□ -0.16
SH3D19-213ENST00000604922 PLCG2P16885 1265 aa14.02□□□□□ -0.17
SH3D19-213ENST00000604922 COLQQ9Y215 455 aaPredicted RBP14.02□□□□□ -0.17
SH3D19-213ENST00000604922 EFCAB3Q8N7B9 438 aa13.99□□□□□ -0.17
SH3D19-213ENST00000604922 OCEL1Q9H607 264 aa13.99□□□□□ -0.17
SH3D19-213ENST00000604922 CHGAP10645 457 aaKnown RBP13.98□□□□□ -0.17
SH3D19-213ENST00000604922 IRX5P78411 483 aaPredicted RBP13.98□□□□□ -0.17
SH3D19-213ENST00000604922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.17
SH3D19-213ENST00000604922 SOX12O15370 315 aa13.96□□□□□ -0.17
SH3D19-213ENST00000604922 HS6ST3Q8IZP7 471 aa13.96□□□□□ -0.17
SH3D19-213ENST00000604922 SLAIN1Q8ND83 568 aa13.87□□□□□ -0.19
SH3D19-213ENST00000604922 NLRP6P59044 892 aa13.86□□□□□ -0.19
SH3D19-213ENST00000604922 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
SH3D19-213ENST00000604922 PDCD7Q8N8D1 485 aaKnown RBP13.86□□□□□ -0.19
SH3D19-213ENST00000604922 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
SH3D19-213ENST00000604922 PHF8Q9UPP1 1060 aa13.84□□□□□ -0.19
SH3D19-213ENST00000604922 G3V3G9 751 aa13.81□□□□□ -0.2
SH3D19-213ENST00000604922 MFRPQ9BY79 579 aa13.8□□□□□ -0.2
SH3D19-213ENST00000604922 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
SH3D19-213ENST00000604922 DPY19L2Q6NUT2 758 aa13.78□□□□□ -0.2
SH3D19-213ENST00000604922 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
SH3D19-213ENST00000604922 RYDENQ9NUL5 291 aaKnown RBP13.76□□□□□ -0.21
SH3D19-213ENST00000604922 MS4A4AQ96JQ5 239 aa13.74□□□□□ -0.21
SH3D19-213ENST00000604922 BOLA1Q9Y3E2 137 aa13.74□□□□□ -0.21
SH3D19-213ENST00000604922 TMEM121BQ9BXQ6 578 aaPredicted RBP13.72□□□□□ -0.21
SH3D19-213ENST00000604922 C3orf67Q6ZVT6 689 aa13.71□□□□□ -0.21
SH3D19-213ENST00000604922 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
SH3D19-213ENST00000604922 BBXQ8WY36 941 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms