RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	ZNF326	Q5BKZ1	582 aa	Known RBP	5.53	□□□□□ -1.52
KCNMA1-223	ENST00000604624	CALR	P27797	417 aa	Known RBP	5.52	□□□□□ -1.53
KCNMA1-223	ENST00000604624	CC2D2A	Q9P2K1	1620 aa		5.51	□□□□□ -1.53
KCNMA1-223	ENST00000604624	TNIK	Q9UKE5	1360 aa		5.51	□□□□□ -1.53
KCNMA1-223	ENST00000604624	ZRSR1	Q15695	479 aa	Known RBP	5.51	□□□□□ -1.53
KCNMA1-223	ENST00000604624		A0A0G2JS52	829 aa		5.5	□□□□□ -1.53
KCNMA1-223	ENST00000604624	CLSTN1	O94985	981 aa		5.5	□□□□□ -1.53
KCNMA1-223	ENST00000604624	RTN4	Q9NQC3	1192 aa	Known RBP	5.5	□□□□□ -1.53
KCNMA1-223	ENST00000604624	TAOK2	Q9UL54	1235 aa		5.5	□□□□□ -1.53
KCNMA1-223	ENST00000604624	PTMA	P06454	111 aa	Known RBP	5.49	□□□□□ -1.53
KCNMA1-223	ENST00000604624	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.49	□□□□□ -1.53
KCNMA1-223	ENST00000604624	DNMBP	Q6XZF7	1577 aa		5.49	□□□□□ -1.53
KCNMA1-223	ENST00000604624	NAP1L5	Q96NT1	182 aa	Predicted RBP	5.49	□□□□□ -1.53
KCNMA1-223	ENST00000604624	CEP164	Q9UPV0	1460 aa		5.49	□□□□□ -1.53
KCNMA1-223	ENST00000604624	FBXO3	Q9UK99	471 aa		5.49	□□□□□ -1.53
KCNMA1-223	ENST00000604624	MAP3K1	Q13233	1512 aa		5.48	□□□□□ -1.53
KCNMA1-223	ENST00000604624	KIF21B	O75037	1637 aa		5.48	□□□□□ -1.53
KCNMA1-223	ENST00000604624	TNNT3	P45378	269 aa	Predicted RBP	5.47	□□□□□ -1.53
KCNMA1-223	ENST00000604624	WDR62	O43379	1518 aa		5.47	□□□□□ -1.53
KCNMA1-223	ENST00000604624	ARID3A	Q99856	593 aa		5.47	□□□□□ -1.53
KCNMA1-223	ENST00000604624	ANP32C	O43423	234 aa		5.46	□□□□□ -1.53
KCNMA1-223	ENST00000604624	PLCB2	Q00722	1185 aa		5.46	□□□□□ -1.53
KCNMA1-223	ENST00000604624	PABPN1	Q86U42	306 aa	Known RBP eCLIP	5.46	□□□□□ -1.54
KCNMA1-223	ENST00000604624	NEUROD1	Q13562	356 aa		5.46	□□□□□ -1.54
KCNMA1-223	ENST00000604624	NCL	P19338	710 aa	Known RBP	5.46	□□□□□ -1.54
KCNMA1-223	ENST00000604624	FANCD2	Q9BXW9	1451 aa		5.46	□□□□□ -1.54
KCNMA1-223	ENST00000604624	CUX1	P39880	1505 aa		5.45	□□□□□ -1.54
KCNMA1-223	ENST00000604624	GON4L	Q3T8J9	2241 aa		5.45	□□□□□ -1.54
KCNMA1-223	ENST00000604624	KIF27	Q86VH2	1401 aa		5.44	□□□□□ -1.54
KCNMA1-223	ENST00000604624	GOLGA3	Q08378	1498 aa		5.44	□□□□□ -1.54
KCNMA1-223	ENST00000604624	TRIM26	Q12899	539 aa	Predicted RBP	5.44	□□□□□ -1.54
KCNMA1-223	ENST00000604624	NOC3L	Q8WTT2	800 aa	Known RBP	5.44	□□□□□ -1.54
KCNMA1-223	ENST00000604624	POLA1	P09884	1462 aa	Predicted RBP	5.44	□□□□□ -1.54
KCNMA1-223	ENST00000604624	TOPBP1	Q92547	1522 aa		5.44	□□□□□ -1.54
KCNMA1-223	ENST00000604624	SYNJ1	O43426	1573 aa		5.44	□□□□□ -1.54
KCNMA1-223	ENST00000604624	SCAF1	Q9H7N4	1312 aa	Known RBP	5.44	□□□□□ -1.54
KCNMA1-223	ENST00000604624	IFT140	Q96RY7	1462 aa		5.43	□□□□□ -1.54
KCNMA1-223	ENST00000604624	AQR	O60306	1485 aa	Known RBP eCLIP	5.43	□□□□□ -1.54
KCNMA1-223	ENST00000604624	TRIM52	Q96A61	297 aa		5.43	□□□□□ -1.54
KCNMA1-223	ENST00000604624	IGF1R	P08069	1367 aa		5.43	□□□□□ -1.54
KCNMA1-223	ENST00000604624	CUX2	O14529	1486 aa		5.42	□□□□□ -1.54
KCNMA1-223	ENST00000604624	ZBTB7C	A1YPR0	619 aa		5.42	□□□□□ -1.54
KCNMA1-223	ENST00000604624	MRC2	Q9UBG0	1479 aa		5.42	□□□□□ -1.54
KCNMA1-223	ENST00000604624	PDE4C	Q08493	712 aa		5.42	□□□□□ -1.54
KCNMA1-223	ENST00000604624	SALL2	Q9Y467	1007 aa	Predicted RBP	5.42	□□□□□ -1.54
KCNMA1-223	ENST00000604624	PLPPR3	Q6T4P5	718 aa		5.41	□□□□□ -1.54
KCNMA1-223	ENST00000604624	CSRNP3	Q8WYN3	585 aa		5.41	□□□□□ -1.54
KCNMA1-223	ENST00000604624		A0A0U1RQG5	324 aa	Predicted RBP	5.4	□□□□□ -1.54
KCNMA1-223	ENST00000604624	ANO8	Q9HCE9	1232 aa	Predicted RBP	5.4	□□□□□ -1.54
KCNMA1-223	ENST00000604624	URB2	Q14146	1524 aa	Known RBP	5.4	□□□□□ -1.54
KCNMA1-223	ENST00000604624	CHAF1A	Q13111	956 aa	Predicted RBP	5.4	□□□□□ -1.54
KCNMA1-223	ENST00000604624	GOLGA6L22	H0YM25	854 aa		5.4	□□□□□ -1.54
KCNMA1-223	ENST00000604624	ERICH6B	Q5W0A0	696 aa		5.4	□□□□□ -1.55
KCNMA1-223	ENST00000604624	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	5.4	□□□□□ -1.55
KCNMA1-223	ENST00000604624	ABCA5	Q8WWZ7	1642 aa		5.4	□□□□□ -1.55
KCNMA1-223	ENST00000604624	FAM50A	Q14320	339 aa	Known RBP	5.4	□□□□□ -1.55
KCNMA1-223	ENST00000604624	KRI1	Q8N9T8	703 aa	Known RBP	5.39	□□□□□ -1.55
KCNMA1-223	ENST00000604624	EFCAB5	A4FU69	1503 aa		5.39	□□□□□ -1.55
KCNMA1-223	ENST00000604624	GOLGA6L6	A8MZA4	724 aa		5.39	□□□□□ -1.55
KCNMA1-223	ENST00000604624	PATL2	C9JE40	543 aa	Known RBP	5.39	□□□□□ -1.55
KCNMA1-223	ENST00000604624	FKBP8	Q14318	412 aa		5.39	□□□□□ -1.55
KCNMA1-223	ENST00000604624	FGD5	Q6ZNL6	1462 aa		5.39	□□□□□ -1.55
KCNMA1-223	ENST00000604624	PLEKHG5	O94827	1062 aa		5.38	□□□□□ -1.55
KCNMA1-223	ENST00000604624	RAPGEF2	Q9Y4G8	1499 aa		5.38	□□□□□ -1.55
KCNMA1-223	ENST00000604624	APP	P05067	770 aa		5.37	□□□□□ -1.55
KCNMA1-223	ENST00000604624	PTMS	P20962	102 aa		5.37	□□□□□ -1.55
KCNMA1-223	ENST00000604624	MYH16	Q9H6N6	1097 aa		5.37	□□□□□ -1.55
KCNMA1-223	ENST00000604624	THOC2	Q8NI27	1593 aa	Known RBP	5.37	□□□□□ -1.55
KCNMA1-223	ENST00000604624	NUP160	Q12769	1436 aa		5.37	□□□□□ -1.55
KCNMA1-223	ENST00000604624	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.37	□□□□□ -1.55
KCNMA1-223	ENST00000604624	MAGI1	Q96QZ7	1491 aa	Predicted RBP	5.37	□□□□□ -1.55
KCNMA1-223	ENST00000604624	FHAD1	B1AJZ9	1412 aa		5.37	□□□□□ -1.55
KCNMA1-223	ENST00000604624	TARBP1	Q13395	1621 aa	Known RBP	5.36	□□□□□ -1.55
KCNMA1-223	ENST00000604624	MEX3C	Q5U5Q3	659 aa	Known RBP	5.36	□□□□□ -1.55
KCNMA1-223	ENST00000604624	CCDC136	Q96JN2	1154 aa		5.36	□□□□□ -1.55
KCNMA1-223	ENST00000604624	TAF7L	Q5H9L4	462 aa		5.36	□□□□□ -1.55
KCNMA1-223	ENST00000604624	SOGA1	O94964	1423 aa		5.36	□□□□□ -1.55
KCNMA1-223	ENST00000604624	NRDC	O43847	1150 aa		5.35	□□□□□ -1.55
KCNMA1-223	ENST00000604624	PNN	Q9H307	717 aa	Known RBP	5.35	□□□□□ -1.55
KCNMA1-223	ENST00000604624	VPS8	Q8N3P4	1428 aa		5.35	□□□□□ -1.55
KCNMA1-223	ENST00000604624	DRC7	Q8IY82	874 aa		5.35	□□□□□ -1.55
KCNMA1-223	ENST00000604624	GRIN2B	Q13224	1484 aa		5.35	□□□□□ -1.55
KCNMA1-223	ENST00000604624	BECN1	Q14457	450 aa		5.34	□□□□□ -1.55
KCNMA1-223	ENST00000604624	CUL7	Q14999	1698 aa		5.34	□□□□□ -1.55
KCNMA1-223	ENST00000604624	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	5.34	□□□□□ -1.55
KCNMA1-223	ENST00000604624	KIAA2012	Q0VF49	1180 aa		5.34	□□□□□ -1.55
KCNMA1-223	ENST00000604624	MSN	P26038	577 aa	Known RBP	5.34	□□□□□ -1.55
KCNMA1-223	ENST00000604624	KIAA0586	Q9BVV6	1533 aa		5.34	□□□□□ -1.55
KCNMA1-223	ENST00000604624	NPHP1	O15259	732 aa		5.34	□□□□□ -1.55
KCNMA1-223	ENST00000604624	ANP32E	Q9BTT0	268 aa		5.34	□□□□□ -1.55
KCNMA1-223	ENST00000604624	PRDM2	Q13029	1718 aa		5.34	□□□□□ -1.56
KCNMA1-223	ENST00000604624	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.33	□□□□□ -1.56
KCNMA1-223	ENST00000604624	GOLGA6L1	Q8N7Z2	621 aa		5.32	□□□□□ -1.56
KCNMA1-223	ENST00000604624	ACIN1	Q9UKV3	1341 aa	Known RBP	5.32	□□□□□ -1.56
KCNMA1-223	ENST00000604624	SET	Q01105	290 aa	Predicted RBP	5.32	□□□□□ -1.56
KCNMA1-223	ENST00000604624	L1TD1	Q5T7N2	865 aa	Known RBP	5.32	□□□□□ -1.56
KCNMA1-223	ENST00000604624	UGGT2	Q9NYU1	1516 aa		5.31	□□□□□ -1.56
KCNMA1-223	ENST00000604624	ARHGEF11	O15085	1522 aa		5.31	□□□□□ -1.56
KCNMA1-223	ENST00000604624	FAM9B	Q8IZU0	186 aa		5.31	□□□□□ -1.56
KCNMA1-223	ENST00000604624	HNRNPU	Q00839	825 aa	Known RBP eCLIP	5.31	□□□□□ -1.56

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