RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 MYH16Q9H6N6 1097 aa27.87■■■□□ 2.05
SH3D19-211ENST00000604030 TNIKQ9UKE5 1360 aa27.84■■■□□ 2.05
SH3D19-211ENST00000604030 NPM1P06748 294 aaKnown RBP eCLIP27.81■■■□□ 2.04
SH3D19-211ENST00000604030 PPM1GO15355 546 aaPredicted RBP27.79■■■□□ 2.04
SH3D19-211ENST00000604030 MYO15BQ96JP2 1530 aa27.76■■■□□ 2.03
SH3D19-211ENST00000604030 GOLGA6L22H0YM25 854 aa27.75■■■□□ 2.03
SH3D19-211ENST00000604030 CDCA8Q53HL2 280 aa27.75■■■□□ 2.03
SH3D19-211ENST00000604030 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
SH3D19-211ENST00000604030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.73■■■□□ 2.032e-8■■□□□ 12
SH3D19-211ENST00000604030 KDM2AQ9Y2K7 1162 aa27.72■■■□□ 2.03
SH3D19-211ENST00000604030 IRX6P78412 446 aaPredicted RBP27.71■■■□□ 2.03
SH3D19-211ENST00000604030 TRIM44Q96DX7 344 aaPredicted RBP27.69■■■□□ 2.02
SH3D19-211ENST00000604030 PPP4R2Q9NY27 417 aa27.68■■■□□ 2.02
SH3D19-211ENST00000604030 NCLP19338 710 aaKnown RBP27.67■■■□□ 2.02
SH3D19-211ENST00000604030 WRNQ14191 1432 aaPredicted RBP eCLIP27.65■■■□□ 2.02
SH3D19-211ENST00000604030 TIMELESSQ9UNS1 1208 aa27.65■■■□□ 2.02
SH3D19-211ENST00000604030 CFAP53Q96M91 514 aa27.61■■■□□ 2.01
SH3D19-211ENST00000604030 ERICH6BQ5W0A0 696 aa27.6■■■□□ 2.01
SH3D19-211ENST00000604030 RRP7BPQ9NSQ0 103 aa27.6■■■□□ 2.01
SH3D19-211ENST00000604030 KIF27Q86VH2 1401 aa27.59■■■□□ 2.01
SH3D19-211ENST00000604030 HIRIP3Q9BW71 556 aaPredicted RBP27.57■■■□□ 2
SH3D19-211ENST00000604030 RB1CC1Q8TDY2 1594 aa27.55■■■□□ 2
SH3D19-211ENST00000604030 SUPT16HQ9Y5B9 1047 aaKnown RBP27.54■■■□□ 2
SH3D19-211ENST00000604030 ARXQ96QS3 562 aa27.53■■■□□ 2
SH3D19-211ENST00000604030 KNSTRNQ9Y448 316 aa27.51■■□□□ 1.99
SH3D19-211ENST00000604030 PLEKHD1A6NEE1 506 aa27.5■■□□□ 1.99
SH3D19-211ENST00000604030 CHMP7Q8WUX9 453 aaPredicted RBP27.49■■□□□ 1.99
SH3D19-211ENST00000604030 CHMP4BQ9H444 224 aaKnown RBP27.49■■□□□ 1.99
SH3D19-211ENST00000604030 CASC1Q6TDU7 716 aa27.47■■□□□ 1.99
SH3D19-211ENST00000604030 CCER2I3L3R5 266 aa27.46■■□□□ 1.99
SH3D19-211ENST00000604030 NOP58Q9Y2X3 529 aaKnown RBP27.45■■□□□ 1.99
SH3D19-211ENST00000604030 MS4A1P11836 297 aa27.44■■□□□ 1.98
SH3D19-211ENST00000604030 TNNT2P45379 298 aaPredicted RBP27.44■■□□□ 1.98
SH3D19-211ENST00000604030 CARD11Q9BXL7 1154 aa27.42■■□□□ 1.98
SH3D19-211ENST00000604030 FHAD1B1AJZ9 1412 aa27.4■■□□□ 1.98
SH3D19-211ENST00000604030 NACADO15069 1562 aa27.4■■□□□ 1.98
SH3D19-211ENST00000604030 CFDP1Q9UEE9 299 aaPredicted RBP27.36■■□□□ 1.97
SH3D19-211ENST00000604030 CCNB3Q8WWL7 1395 aa27.36■■□□□ 1.97
SH3D19-211ENST00000604030 FTSJ3Q8IY81 847 aaKnown RBP27.36■■□□□ 1.97
SH3D19-211ENST00000604030 BAZ1BQ9UIG0 1483 aaKnown RBP27.33■■□□□ 1.97
SH3D19-211ENST00000604030 CDK11BP21127 795 aaKnown RBP27.32■■□□□ 1.96
SH3D19-211ENST00000604030 NUDCQ9Y266 331 aa27.32■■□□□ 1.96
SH3D19-211ENST00000604030 PTMAP06454 111 aaKnown RBP27.32■■□□□ 1.96
SH3D19-211ENST00000604030 ZRSR1Q15695 479 aaKnown RBP27.27■■□□□ 1.96
SH3D19-211ENST00000604030 MAPK8IP3Q9UPT6 1336 aa27.26■■□□□ 1.96
SH3D19-211ENST00000604030 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
SH3D19-211ENST00000604030 RGL3Q3MIN7 710 aa27.24■■□□□ 1.95
SH3D19-211ENST00000604030 PNNQ9H307 717 aaKnown RBP27.24■■□□□ 1.95
SH3D19-211ENST00000604030 CFAP44Q96MT7 982 aa27.22■■□□□ 1.95
SH3D19-211ENST00000604030 PPP1R15AO75807 674 aaPredicted RBP27.22■■□□□ 1.95
SH3D19-211ENST00000604030 SIN3AQ96ST3 1273 aa27.2■■□□□ 1.94
SH3D19-211ENST00000604030 L1TD1Q5T7N2 865 aaKnown RBP27.19■■□□□ 1.94
SH3D19-211ENST00000604030 DNTTIP2Q5QJE6 756 aaKnown RBP27.16■■□□□ 1.94
SH3D19-211ENST00000604030 SETD5Q9C0A6 1442 aa27.15■■□□□ 1.94
SH3D19-211ENST00000604030 LAS1LQ9Y4W2 734 aaKnown RBP27.14■■□□□ 1.94
SH3D19-211ENST00000604030 VPS8Q8N3P4 1428 aa27.14■■□□□ 1.94
SH3D19-211ENST00000604030 TMF1P82094 1093 aa27.14■■□□□ 1.94
SH3D19-211ENST00000604030 RGS3P49796 1198 aa27.12■■□□□ 1.93
SH3D19-211ENST00000604030 NAP1L5Q96NT1 182 aaPredicted RBP27.12■■□□□ 1.93
SH3D19-211ENST00000604030 HSP90AB1P08238 724 aaKnown RBP27.1■■□□□ 1.93
SH3D19-211ENST00000604030 GOLGA6L6A8MZA4 724 aa27.09■■□□□ 1.93
SH3D19-211ENST00000604030 B4GALNT3Q6L9W6 998 aa27.09■■□□□ 1.93
SH3D19-211ENST00000604030 HSCBQ8IWL3 235 aa27.06■■□□□ 1.92
SH3D19-211ENST00000604030 PTMSP20962 102 aa27.06■■□□□ 1.92
SH3D19-211ENST00000604030 NRDCO43847 1150 aa27.06■■□□□ 1.92
SH3D19-211ENST00000604030 KCNH8Q96L42 1107 aa27.05■■□□□ 1.92
SH3D19-211ENST00000604030 RBM19Q9Y4C8 960 aaKnown RBP27.05■■□□□ 1.92
SH3D19-211ENST00000604030 HAP1P54257 671 aaPredicted RBP27.05■■□□□ 1.92
SH3D19-211ENST00000604030 FRAT1Q92837 279 aaPredicted RBP27.03■■□□□ 1.92
SH3D19-211ENST00000604030 ARHGAP35Q9NRY4 1499 aa27■■□□□ 1.91
SH3D19-211ENST00000604030 ARID4BQ4LE39 1312 aaPredicted RBP26.99■■□□□ 1.91
SH3D19-211ENST00000604030 CARMIL1Q5VZK9 1371 aa26.99■■□□□ 1.91
SH3D19-211ENST00000604030 NEUROD2Q15784 382 aa26.98■■□□□ 1.91
SH3D19-211ENST00000604030 TCERG1O14776 1098 aaKnown RBP26.97■■□□□ 1.91
SH3D19-211ENST00000604030 DEKP35659 375 aaKnown RBP26.97■■□□□ 1.91
SH3D19-211ENST00000604030 CC2D1BQ5T0F9 858 aaKnown RBP26.95■■□□□ 1.9
SH3D19-211ENST00000604030 KTN1Q86UP2 1357 aaKnown RBP26.95■■□□□ 1.9
SH3D19-211ENST00000604030 PLPPR3Q6T4P5 718 aa26.95■■□□□ 1.9
SH3D19-211ENST00000604030 KANK1Q14678 1352 aa26.94■■□□□ 1.9
SH3D19-211ENST00000604030 C14orf37Q86TY3 774 aa26.94■■□□□ 1.9
SH3D19-211ENST00000604030 RALBP1Q15311 655 aa26.93■■□□□ 1.9
SH3D19-211ENST00000604030 POGKQ9P215 609 aa26.93■■□□□ 1.9
SH3D19-211ENST00000604030 HSPA5P11021 654 aaKnown RBP26.93■■□□□ 1.9
SH3D19-211ENST00000604030 CHAF1AQ13111 956 aaPredicted RBP26.93■■□□□ 1.9
SH3D19-211ENST00000604030 MCCP23508 829 aa26.93■■□□□ 1.9
SH3D19-211ENST00000604030 DCAF11Q8TEB1 546 aa26.89■■□□□ 1.9
SH3D19-211ENST00000604030 MSNP26038 577 aaKnown RBP26.89■■□□□ 1.89
SH3D19-211ENST00000604030 SOGA1O94964 1423 aa26.89■■□□□ 1.89
SH3D19-211ENST00000604030 IPO8O15397 1037 aaKnown RBP26.85■■□□□ 1.89
SH3D19-211ENST00000604030 CUX2O14529 1486 aa26.85■■□□□ 1.89
SH3D19-211ENST00000604030 ZBTB7CA1YPR0 619 aa26.84■■□□□ 1.89
SH3D19-211ENST00000604030 U2SURPO15042 1029 aaKnown RBP26.84■■□□□ 1.89
SH3D19-211ENST00000604030 GBP4Q96PP9 640 aa26.83■■□□□ 1.89
SH3D19-211ENST00000604030 GOLGA6L4A6NEF3 574 aa26.82■■□□□ 1.88
SH3D19-211ENST00000604030 RTN4Q9NQC3 1192 aaKnown RBP26.82■■□□□ 1.88
SH3D19-211ENST00000604030 RCAN3Q9UKA8 241 aa26.82■■□□□ 1.88
SH3D19-211ENST00000604030 SENP3-EIF4A1A0A087X0R7 540 aa26.82■■□□□ 1.88
SH3D19-211ENST00000604030 OS9Q13438 667 aaPredicted RBP26.8■■□□□ 1.88
SH3D19-211ENST00000604030 MORC1Q86VD1 984 aa26.8■■□□□ 1.88
SH3D19-211ENST00000604030 FGD1P98174 961 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms