RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 ARID4BQ4LE39 1312 aaPredicted RBP21.31■■□□□ 1
PTPRS-205ENST00000588012 NACADO15069 1562 aa21.31■■□□□ 1
PTPRS-205ENST00000588012 ANP32BQ92688 251 aaKnown RBP21.31■■□□□ 1
PTPRS-205ENST00000588012 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
PTPRS-205ENST00000588012 GOLGA3Q08378 1498 aa21.3■■□□□ 1
PTPRS-205ENST00000588012 MRS2Q9HD23 443 aa21.29■■□□□ 1
PTPRS-205ENST00000588012 ERCC6Q03468 1493 aa21.29■■□□□ 1
PTPRS-205ENST00000588012 EEA1Q15075 1411 aa21.29■■□□□ 1
PTPRS-205ENST00000588012 PLEKHG5O94827 1062 aa21.26■□□□□ 0.99
PTPRS-205ENST00000588012 EIF4G2P78344 907 aaKnown RBP eCLIP21.24■□□□□ 0.99
PTPRS-205ENST00000588012 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
PTPRS-205ENST00000588012 MYH16Q9H6N6 1097 aa21.23■□□□□ 0.99
PTPRS-205ENST00000588012 CCDC136Q96JN2 1154 aa21.22■□□□□ 0.99
PTPRS-205ENST00000588012 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
PTPRS-205ENST00000588012 CFDP1Q9UEE9 299 aaPredicted RBP21.21■□□□□ 0.99
PTPRS-205ENST00000588012 HAP1P54257 671 aaPredicted RBP21.19■□□□□ 0.98
PTPRS-205ENST00000588012 RGL3Q3MIN7 710 aa21.18■□□□□ 0.98
PTPRS-205ENST00000588012 CEP162Q5TB80 1403 aa21.15■□□□□ 0.98
PTPRS-205ENST00000588012 HIRIP3Q9BW71 556 aaPredicted RBP21.13■□□□□ 0.97
PTPRS-205ENST00000588012 CDCA8Q53HL2 280 aa21.12■□□□□ 0.97
PTPRS-205ENST00000588012 CFAP53Q96M91 514 aa21.11■□□□□ 0.97
PTPRS-205ENST00000588012 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
PTPRS-205ENST00000588012 KNSTRNQ9Y448 316 aa21.04■□□□□ 0.96
PTPRS-205ENST00000588012 CARD11Q9BXL7 1154 aa21.01■□□□□ 0.95
PTPRS-205ENST00000588012 PPM1GO15355 546 aaPredicted RBP21■□□□□ 0.95
PTPRS-205ENST00000588012 POGKQ9P215 609 aa20.99■□□□□ 0.95
PTPRS-205ENST00000588012 BAZ1AQ9NRL2 1556 aaPredicted RBP20.98■□□□□ 0.95
PTPRS-205ENST00000588012 TNIKQ9UKE5 1360 aa20.98■□□□□ 0.95
PTPRS-205ENST00000588012 EIF4G1Q04637 1599 aaKnown RBP20.97■□□□□ 0.95
PTPRS-205ENST00000588012 ARXQ96QS3 562 aa20.96■□□□□ 0.95
PTPRS-205ENST00000588012 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.95
PTPRS-205ENST00000588012 IRX6P78412 446 aaPredicted RBP20.94■□□□□ 0.94
PTPRS-205ENST00000588012 LMOD2Q6P5Q4 547 aa20.94■□□□□ 0.94
PTPRS-205ENST00000588012 MIER1Q8N108 512 aa20.93■□□□□ 0.94
PTPRS-205ENST00000588012 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
PTPRS-205ENST00000588012 MAPK8IP3Q9UPT6 1336 aa20.91■□□□□ 0.94
PTPRS-205ENST00000588012 KANK1Q14678 1352 aa20.91■□□□□ 0.94
PTPRS-205ENST00000588012 NUDCQ9Y266 331 aa20.9■□□□□ 0.94
PTPRS-205ENST00000588012 CDK11BP21127 795 aaKnown RBP20.88■□□□□ 0.93
PTPRS-205ENST00000588012 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
PTPRS-205ENST00000588012 LAS1LQ9Y4W2 734 aaKnown RBP20.85■□□□□ 0.93
PTPRS-205ENST00000588012 CUX2O14529 1486 aa20.85■□□□□ 0.93
PTPRS-205ENST00000588012 HDGFP51858 240 aaKnown RBP20.85■□□□□ 0.93
PTPRS-205ENST00000588012 FTSJ3Q8IY81 847 aaKnown RBP20.85■□□□□ 0.93
PTPRS-205ENST00000588012 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
PTPRS-205ENST00000588012 BECN1Q14457 450 aa20.83■□□□□ 0.92
PTPRS-205ENST00000588012 CASC1Q6TDU7 716 aa20.82■□□□□ 0.92
PTPRS-205ENST00000588012 NBR1Q14596 966 aa20.81■□□□□ 0.92
PTPRS-205ENST00000588012 NCLP19338 710 aaKnown RBP20.81■□□□□ 0.92
PTPRS-205ENST00000588012 MLECQ14165 292 aa20.81■□□□□ 0.92
PTPRS-205ENST00000588012 NEUROD2Q15784 382 aa20.8■□□□□ 0.92
PTPRS-205ENST00000588012 MYO15BQ96JP2 1530 aa20.8■□□□□ 0.92
PTPRS-205ENST00000588012 DDRGK1Q96HY6 314 aa20.79■□□□□ 0.92
PTPRS-205ENST00000588012 NPHP1O15259 732 aa20.78■□□□□ 0.92
PTPRS-205ENST00000588012 TNNT2P45379 298 aaPredicted RBP20.77■□□□□ 0.92
PTPRS-205ENST00000588012 PNNQ9H307 717 aaKnown RBP20.75■□□□□ 0.91
PTPRS-205ENST00000588012 EIF5BO60841 1220 aaKnown RBP20.75■□□□□ 0.91
PTPRS-205ENST00000588012 SENP3-EIF4A1A0A087X0R7 540 aa20.75■□□□□ 0.91
PTPRS-205ENST00000588012 SIN3AQ96ST3 1273 aa20.74■□□□□ 0.91
PTPRS-205ENST00000588012 TMF1P82094 1093 aa20.73■□□□□ 0.91
PTPRS-205ENST00000588012 CC2D1BQ5T0F9 858 aaKnown RBP20.73■□□□□ 0.91
PTPRS-205ENST00000588012 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
PTPRS-205ENST00000588012 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
PTPRS-205ENST00000588012 DCAF11Q8TEB1 546 aa20.72■□□□□ 0.91
PTPRS-205ENST00000588012 CARMIL2Q6F5E8 1435 aa20.72■□□□□ 0.91
PTPRS-205ENST00000588012 GOLGA6L22H0YM25 854 aa20.71■□□□□ 0.91
PTPRS-205ENST00000588012 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
PTPRS-205ENST00000588012 CHMP4BQ9H444 224 aaKnown RBP20.69■□□□□ 0.9
PTPRS-205ENST00000588012 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
PTPRS-205ENST00000588012 GGT6Q6P531 493 aa20.65■□□□□ 0.9
PTPRS-205ENST00000588012 OS9Q13438 667 aaPredicted RBP20.65■□□□□ 0.9
PTPRS-205ENST00000588012 FRAT1Q92837 279 aaPredicted RBP20.65■□□□□ 0.9
PTPRS-205ENST00000588012 ZRSR1Q15695 479 aaKnown RBP20.65■□□□□ 0.9
PTPRS-205ENST00000588012 MS4A1P11836 297 aa20.64■□□□□ 0.89
PTPRS-205ENST00000588012 SMARCA2P51531 1590 aa20.64■□□□□ 0.89
PTPRS-205ENST00000588012 ARHGAP35Q9NRY4 1499 aa20.64■□□□□ 0.89
PTPRS-205ENST00000588012 ANP32EQ9BTT0 268 aa20.62■□□□□ 0.89
PTPRS-205ENST00000588012 SOGA1O94964 1423 aa20.61■□□□□ 0.89
PTPRS-205ENST00000588012 SOX12O15370 315 aa20.61■□□□□ 0.89
PTPRS-205ENST00000588012 SAFB2Q14151 953 aaKnown RBP eCLIP20.6■□□□□ 0.89
PTPRS-205ENST00000588012 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
PTPRS-205ENST00000588012 MORC1Q86VD1 984 aa20.59■□□□□ 0.89
PTPRS-205ENST00000588012 GOLGA2Q08379 1002 aa20.57■□□□□ 0.88
PTPRS-205ENST00000588012 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
PTPRS-205ENST00000588012 STK26Q9P289 416 aa20.55■□□□□ 0.88
PTPRS-205ENST00000588012 HDGFL2Q7Z4V5 671 aaPredicted RBP20.55■□□□□ 0.88
PTPRS-205ENST00000588012 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
PTPRS-205ENST00000588012 PKD2Q13563 968 aa20.53■□□□□ 0.88
PTPRS-205ENST00000588012 EFCAB2Q5VUJ9 269 aa20.53■□□□□ 0.88
PTPRS-205ENST00000588012 TRIM44Q96DX7 344 aaPredicted RBP20.53■□□□□ 0.88
PTPRS-205ENST00000588012 RTF1Q92541 710 aaKnown RBP20.52■□□□□ 0.87
PTPRS-205ENST00000588012 TIMELESSQ9UNS1 1208 aa20.51■□□□□ 0.87
PTPRS-205ENST00000588012 TPRNQ4KMQ1 711 aa20.51■□□□□ 0.87
PTPRS-205ENST00000588012 TULP1O00294 542 aaPredicted RBP20.5■□□□□ 0.87
PTPRS-205ENST00000588012 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
PTPRS-205ENST00000588012 RGS3P49796 1198 aa20.5■□□□□ 0.87
PTPRS-205ENST00000588012 FGD1P98174 961 aa20.5■□□□□ 0.87
PTPRS-205ENST00000588012 KCNJ4P48050 445 aa20.49■□□□□ 0.87
PTPRS-205ENST00000588012 FMN1Q68DA7 1419 aa20.49■□□□□ 0.87
PTPRS-205ENST00000588012 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms