RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 METRNQ9UJH8 293 aa15.57■□□□□ 0.08
RPRD1A-205ENST00000587563 MAMSTRQ6ZN01 415 aa15.55■□□□□ 0.08
RPRD1A-205ENST00000587563 POTEMA6NI47 508 aa15.54■□□□□ 0.08
RPRD1A-205ENST00000587563 ATMINO43313 823 aaPredicted RBP15.54■□□□□ 0.08
RPRD1A-205ENST00000587563 POTEGQ6S5H5 508 aa15.48■□□□□ 0.07
RPRD1A-205ENST00000587563 TSPYL2Q9H2G4 693 aaPredicted RBP15.48■□□□□ 0.07
RPRD1A-205ENST00000587563 PROM2Q8N271 834 aa15.47■□□□□ 0.07
RPRD1A-205ENST00000587563 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
RPRD1A-205ENST00000587563 PCDH10Q9P2E7 1040 aa15.46■□□□□ 0.07
RPRD1A-205ENST00000587563 CCDC61Q9Y6R9 512 aa15.43■□□□□ 0.06
RPRD1A-205ENST00000587563 SCUBE2Q9NQ36 999 aa15.41■□□□□ 0.06
RPRD1A-205ENST00000587563 KIF12Q96FN5 646 aa15.37■□□□□ 0.05
RPRD1A-205ENST00000587563 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
RPRD1A-205ENST00000587563 POTEJP0CG39 1038 aa15.33■□□□□ 0.04
RPRD1A-205ENST00000587563 TIE1P35590 1138 aa15.3■□□□□ 0.04
RPRD1A-205ENST00000587563 MIER1Q8N108 512 aa15.29■□□□□ 0.04
RPRD1A-205ENST00000587563 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
RPRD1A-205ENST00000587563 MAP3K13O43283 966 aa15.24■□□□□ 0.03
RPRD1A-205ENST00000587563 FAM163AQ96GL9 167 aaPredicted RBP15.23■□□□□ 0.03
RPRD1A-205ENST00000587563 SEC24BO95487 1268 aa15.18■□□□□ 0.02
RPRD1A-205ENST00000587563 RASEFQ8IZ41 740 aa15.18■□□□□ 0.02
RPRD1A-205ENST00000587563 SGIP1Q9BQI5 828 aa15.18■□□□□ 0.02
RPRD1A-205ENST00000587563 ZBTB47Q9UFB7 747 aaPredicted RBP15.17■□□□□ 0.02
RPRD1A-205ENST00000587563 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
RPRD1A-205ENST00000587563 POTEFA5A3E0 1075 aa15.16■□□□□ 0.02
RPRD1A-205ENST00000587563 PLCD3Q8N3E9 789 aa15.15■□□□□ 0.02
RPRD1A-205ENST00000587563 TTLL13PA6NNM8 815 aa15.14■□□□□ 0.01
RPRD1A-205ENST00000587563 IER5LQ5T953 404 aa15.13■□□□□ 0.01
RPRD1A-205ENST00000587563 LCE2DQ5TA82 110 aaPredicted RBP15.13■□□□□ 0.01
RPRD1A-205ENST00000587563 PCDHB13Q9Y5F0 798 aa15.09■□□□□ 0.01
RPRD1A-205ENST00000587563 TRIM35Q9UPQ4 493 aa15.06■□□□□ 0
RPRD1A-205ENST00000587563 COLQQ9Y215 455 aaPredicted RBP15.05■□□□□ -0
RPRD1A-205ENST00000587563 FAM212AQ96EL1 285 aa14.99□□□□□ -0.01
RPRD1A-205ENST00000587563 NUBP1P53384 320 aa14.97□□□□□ -0.01
RPRD1A-205ENST00000587563 PLCG2P16885 1265 aa14.92□□□□□ -0.02
RPRD1A-205ENST00000587563 IFNL1Q8IU54 200 aa14.92□□□□□ -0.02
RPRD1A-205ENST00000587563 SLAIN1Q8ND83 568 aa14.92□□□□□ -0.02
RPRD1A-205ENST00000587563 TMEM106CQ9BVX2 250 aa14.92□□□□□ -0.02
RPRD1A-205ENST00000587563 CDAN1Q8IWY9 1227 aa14.91□□□□□ -0.02
RPRD1A-205ENST00000587563 ST18O60284 1047 aa14.81□□□□□ -0.04
RPRD1A-205ENST00000587563 IRX5P78411 483 aaPredicted RBP14.8□□□□□ -0.04
RPRD1A-205ENST00000587563 OCEL1Q9H607 264 aa14.79□□□□□ -0.04
RPRD1A-205ENST00000587563 SNPHO15079 494 aa14.78□□□□□ -0.04
RPRD1A-205ENST00000587563 TMEM121BQ9BXQ6 578 aaPredicted RBP14.76□□□□□ -0.05
RPRD1A-205ENST00000587563 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
RPRD1A-205ENST00000587563 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
RPRD1A-205ENST00000587563 PYGBP11216 843 aa14.68□□□□□ -0.06
RPRD1A-205ENST00000587563 FKBP8Q14318 412 aa14.68□□□□□ -0.06
RPRD1A-205ENST00000587563 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
RPRD1A-205ENST00000587563 PCDHB8Q9UN66 801 aa14.61□□□□□ -0.07
RPRD1A-205ENST00000587563 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
RPRD1A-205ENST00000587563 GOLGA2Q08379 1002 aa14.58□□□□□ -0.08
RPRD1A-205ENST00000587563 GSE1Q14687 1217 aa14.57□□□□□ -0.08
RPRD1A-205ENST00000587563 L3MBTL3Q96JM7 780 aaPredicted RBP14.57□□□□□ -0.08
RPRD1A-205ENST00000587563 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
RPRD1A-205ENST00000587563 MKRN3Q13064 507 aaKnown RBP14.55□□□□□ -0.08
RPRD1A-205ENST00000587563 MMRN1Q13201 1228 aa14.55□□□□□ -0.08
RPRD1A-205ENST00000587563 SPNS2Q8IVW8 549 aa14.54□□□□□ -0.08
RPRD1A-205ENST00000587563 PDCD7Q8N8D1 485 aaKnown RBP14.5□□□□□ -0.09
RPRD1A-205ENST00000587563 MARVELD3Q96A59 401 aa14.5□□□□□ -0.09
RPRD1A-205ENST00000587563 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
RPRD1A-205ENST00000587563 CHRM1P11229 460 aaPredicted RBP14.47□□□□□ -0.09
RPRD1A-205ENST00000587563 EMP3P54852 163 aa14.45□□□□□ -0.1
RPRD1A-205ENST00000587563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.44□□□□□ -0.1
RPRD1A-205ENST00000587563 PSEN1P49768 467 aa14.4□□□□□ -0.1
RPRD1A-205ENST00000587563 VASPP50552 380 aaPredicted RBP14.39□□□□□ -0.11
RPRD1A-205ENST00000587563 G3V3G9 751 aa14.34□□□□□ -0.11
RPRD1A-205ENST00000587563 PDAP1Q13442 181 aaKnown RBP14.33□□□□□ -0.12
RPRD1A-205ENST00000587563 HS3ST6Q96QI5 342 aa14.32□□□□□ -0.12
RPRD1A-205ENST00000587563 FAM205CA6NFA0 338 aa14.3□□□□□ -0.12
RPRD1A-205ENST00000587563 ILDR1Q86SU0 546 aaPredicted RBP14.3□□□□□ -0.12
RPRD1A-205ENST00000587563 KRTAP3-3Q9BYR6 98 aa14.24□□□□□ -0.13
RPRD1A-205ENST00000587563 KRTAP3-2Q9BYR7 98 aa14.24□□□□□ -0.13
RPRD1A-205ENST00000587563 BOLA1Q9Y3E2 137 aa14.24□□□□□ -0.13
RPRD1A-205ENST00000587563 CABP2Q9NPB3 220 aa14.21□□□□□ -0.13
RPRD1A-205ENST00000587563 POTEB3A0JP26 581 aa14.2□□□□□ -0.14
RPRD1A-205ENST00000587563 POTEBQ6S5H4 581 aa14.2□□□□□ -0.14
RPRD1A-205ENST00000587563 ZNF710Q8N1W2 664 aa14.19□□□□□ -0.14
RPRD1A-205ENST00000587563 DPY19L2Q6NUT2 758 aa14.18□□□□□ -0.14
RPRD1A-205ENST00000587563 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
RPRD1A-205ENST00000587563 DOK7Q18PE1 504 aa14.17□□□□□ -0.14
RPRD1A-205ENST00000587563 CIZ1Q9ULV3 898 aaPredicted RBP14.16□□□□□ -0.14
RPRD1A-205ENST00000587563 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
RPRD1A-205ENST00000587563 HOXB1P14653 301 aaPredicted RBP14.14□□□□□ -0.15
RPRD1A-205ENST00000587563 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
RPRD1A-205ENST00000587563 ERBB3P21860 1342 aa14.1□□□□□ -0.15
RPRD1A-205ENST00000587563 TRIM41Q8WV44 630 aa14.07□□□□□ -0.16
RPRD1A-205ENST00000587563 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
RPRD1A-205ENST00000587563 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
RPRD1A-205ENST00000587563 RNF166Q96A37 237 aaPredicted RBP13.98□□□□□ -0.17
RPRD1A-205ENST00000587563 EFCAB3Q8N7B9 438 aa13.97□□□□□ -0.17
RPRD1A-205ENST00000587563 VARS2Q5ST30 1063 aaKnown RBP13.95□□□□□ -0.18
RPRD1A-205ENST00000587563 MICALL2Q8IY33 904 aa13.92□□□□□ -0.18
RPRD1A-205ENST00000587563 SOX12O15370 315 aa13.91□□□□□ -0.18
RPRD1A-205ENST00000587563 PTGER2P43116 358 aa13.91□□□□□ -0.18
RPRD1A-205ENST00000587563 ZNF687Q8N1G0 1237 aa13.91□□□□□ -0.18
RPRD1A-205ENST00000587563 MYT1LQ9UL68 1186 aa13.91□□□□□ -0.18
RPRD1A-205ENST00000587563 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
RPRD1A-205ENST00000587563 TMEM92Q6UXU6 159 aa13.82□□□□□ -0.2
RPRD1A-205ENST00000587563 RIOK3O14730 519 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms