RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
PRKCA-205ENST00000583775 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
PRKCA-205ENST00000583775 METRNQ9UJH8 293 aa13.39□□□□□ -0.27
PRKCA-205ENST00000583775 C7P10643 843 aa13.38□□□□□ -0.27
PRKCA-205ENST00000583775 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
PRKCA-205ENST00000583775 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
PRKCA-205ENST00000583775 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
PRKCA-205ENST00000583775 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.28
PRKCA-205ENST00000583775 ATN1P54259 1190 aaPredicted RBP13.31□□□□□ -0.28
PRKCA-205ENST00000583775 POTEMA6NI47 508 aa13.3□□□□□ -0.28
PRKCA-205ENST00000583775 POTEFA5A3E0 1075 aa13.27□□□□□ -0.29
PRKCA-205ENST00000583775 POTEGQ6S5H5 508 aa13.26□□□□□ -0.29
PRKCA-205ENST00000583775 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
PRKCA-205ENST00000583775 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
PRKCA-205ENST00000583775 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
PRKCA-205ENST00000583775 LCE2DQ5TA82 110 aaPredicted RBP13.23□□□□□ -0.29
PRKCA-205ENST00000583775 MAP3K13O43283 966 aa13.22□□□□□ -0.29
PRKCA-205ENST00000583775 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
PRKCA-205ENST00000583775 TIE1P35590 1138 aa13.19□□□□□ -0.3
PRKCA-205ENST00000583775 MIER1Q8N108 512 aa13.18□□□□□ -0.3
PRKCA-205ENST00000583775 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
PRKCA-205ENST00000583775 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
PRKCA-205ENST00000583775 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
PRKCA-205ENST00000583775 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
PRKCA-205ENST00000583775 SCUBE2Q9NQ36 999 aa13.1□□□□□ -0.31
PRKCA-205ENST00000583775 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
PRKCA-205ENST00000583775 NUBP1P53384 320 aa13.09□□□□□ -0.31
PRKCA-205ENST00000583775 FAM163AQ96GL9 167 aaPredicted RBP13.03□□□□□ -0.32
PRKCA-205ENST00000583775 IER5LQ5T953 404 aa13.02□□□□□ -0.33
PRKCA-205ENST00000583775 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
PRKCA-205ENST00000583775 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
PRKCA-205ENST00000583775 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
PRKCA-205ENST00000583775 IFNL1Q8IU54 200 aa12.97□□□□□ -0.33
PRKCA-205ENST00000583775 SEC24BO95487 1268 aa12.95□□□□□ -0.34
PRKCA-205ENST00000583775 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
PRKCA-205ENST00000583775 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
PRKCA-205ENST00000583775 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
PRKCA-205ENST00000583775 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
PRKCA-205ENST00000583775 FKBP8Q14318 412 aa12.81□□□□□ -0.36
PRKCA-205ENST00000583775 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
PRKCA-205ENST00000583775 ST18O60284 1047 aa12.78□□□□□ -0.36
PRKCA-205ENST00000583775 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
PRKCA-205ENST00000583775 PLCG2P16885 1265 aa12.76□□□□□ -0.37
PRKCA-205ENST00000583775 OCEL1Q9H607 264 aa12.74□□□□□ -0.37
PRKCA-205ENST00000583775 PYGBP11216 843 aa12.73□□□□□ -0.37
PRKCA-205ENST00000583775 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
PRKCA-205ENST00000583775 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
PRKCA-205ENST00000583775 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
PRKCA-205ENST00000583775 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
PRKCA-205ENST00000583775 TMEM121BQ9BXQ6 578 aaPredicted RBP12.62□□□□□ -0.39
PRKCA-205ENST00000583775 CHRM1P11229 460 aaPredicted RBP12.59□□□□□ -0.39
PRKCA-205ENST00000583775 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.58□□□□□ -0.4
PRKCA-205ENST00000583775 SNPHO15079 494 aa12.55□□□□□ -0.4
PRKCA-205ENST00000583775 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
PRKCA-205ENST00000583775 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
PRKCA-205ENST00000583775 VASPP50552 380 aaPredicted RBP12.54□□□□□ -0.4
PRKCA-205ENST00000583775 GSE1Q14687 1217 aa12.54□□□□□ -0.4
PRKCA-205ENST00000583775 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
PRKCA-205ENST00000583775 MMRN1Q13201 1228 aa12.49□□□□□ -0.41
PRKCA-205ENST00000583775 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
PRKCA-205ENST00000583775 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
PRKCA-205ENST00000583775 PSEN1P49768 467 aa12.46□□□□□ -0.41
PRKCA-205ENST00000583775 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
PRKCA-205ENST00000583775 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
PRKCA-205ENST00000583775 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRKCA-205ENST00000583775 POTEB3A0JP26 581 aa12.42□□□□□ -0.42
PRKCA-205ENST00000583775 POTEBQ6S5H4 581 aa12.42□□□□□ -0.42
PRKCA-205ENST00000583775 C3orf67Q6ZVT6 689 aa12.41□□□□□ -0.42
PRKCA-205ENST00000583775 GOLGA2Q08379 1002 aa12.39□□□□□ -0.43
PRKCA-205ENST00000583775 PDAP1Q13442 181 aaKnown RBP12.38□□□□□ -0.43
PRKCA-205ENST00000583775 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
PRKCA-205ENST00000583775 KRTAP3-3Q9BYR6 98 aa12.37□□□□□ -0.43
PRKCA-205ENST00000583775 KRTAP3-2Q9BYR7 98 aa12.37□□□□□ -0.43
PRKCA-205ENST00000583775 EMP3P54852 163 aa12.34□□□□□ -0.43
PRKCA-205ENST00000583775 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
PRKCA-205ENST00000583775 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
PRKCA-205ENST00000583775 HOXB3P14651 431 aaPredicted RBP12.31□□□□□ -0.44
PRKCA-205ENST00000583775 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
PRKCA-205ENST00000583775 CABP2Q9NPB3 220 aa12.28□□□□□ -0.44
PRKCA-205ENST00000583775 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
PRKCA-205ENST00000583775 FAM205CA6NFA0 338 aa12.27□□□□□ -0.45
PRKCA-205ENST00000583775 CIZ1Q9ULV3 898 aaPredicted RBP12.21□□□□□ -0.45
PRKCA-205ENST00000583775 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
PRKCA-205ENST00000583775 EFCAB3Q8N7B9 438 aa12.14□□□□□ -0.47
PRKCA-205ENST00000583775 TMEM92Q6UXU6 159 aa12.12□□□□□ -0.47
PRKCA-205ENST00000583775 G3V3G9 751 aa12.11□□□□□ -0.47
PRKCA-205ENST00000583775 DOK7Q18PE1 504 aa12.11□□□□□ -0.47
PRKCA-205ENST00000583775 TRIM41Q8WV44 630 aa12.1□□□□□ -0.47
PRKCA-205ENST00000583775 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
PRKCA-205ENST00000583775 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
PRKCA-205ENST00000583775 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
PRKCA-205ENST00000583775 ERBB3P21860 1342 aa12.05□□□□□ -0.48
PRKCA-205ENST00000583775 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
PRKCA-205ENST00000583775 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
PRKCA-205ENST00000583775 SOX12O15370 315 aa12.02□□□□□ -0.49
PRKCA-205ENST00000583775 GPR153Q6NV75 609 aa12.02□□□□□ -0.49
PRKCA-205ENST00000583775 RIMBP2O15034 1052 aa11.99□□□□□ -0.49
PRKCA-205ENST00000583775 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
PRKCA-205ENST00000583775 ZNF687Q8N1G0 1237 aa11.98□□□□□ -0.49
PRKCA-205ENST00000583775 RIOK3O14730 519 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms