RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 TNIKQ9UKE5 1360 aa21.78■■□□□ 1.08
ERBB2-214ENST00000583038 NACADO15069 1562 aa21.77■■□□□ 1.08
ERBB2-214ENST00000583038 MIER1Q8N108 512 aa21.77■■□□□ 1.08
ERBB2-214ENST00000583038 RRP7BPQ9NSQ0 103 aa21.75■■□□□ 1.07
ERBB2-214ENST00000583038 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
ERBB2-214ENST00000583038 CDCA8Q53HL2 280 aa21.73■■□□□ 1.07
ERBB2-214ENST00000583038 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
ERBB2-214ENST00000583038 MYH16Q9H6N6 1097 aa21.7■■□□□ 1.06
ERBB2-214ENST00000583038 CFDP1Q9UEE9 299 aaPredicted RBP21.65■■□□□ 1.06
ERBB2-214ENST00000583038 CFAP53Q96M91 514 aa21.61■■□□□ 1.05
ERBB2-214ENST00000583038 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
ERBB2-214ENST00000583038 HIRIP3Q9BW71 556 aaPredicted RBP21.6■■□□□ 1.05
ERBB2-214ENST00000583038 PPP1R15AO75807 674 aaPredicted RBP21.58■■□□□ 1.05
ERBB2-214ENST00000583038 KCNH8Q96L42 1107 aa21.58■■□□□ 1.05
ERBB2-214ENST00000583038 DDRGK1Q96HY6 314 aa21.57■■□□□ 1.04
ERBB2-214ENST00000583038 BAZ1AQ9NRL2 1556 aaPredicted RBP21.55■■□□□ 1.04
ERBB2-214ENST00000583038 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
ERBB2-214ENST00000583038 BECN1Q14457 450 aa21.55■■□□□ 1.04
ERBB2-214ENST00000583038 KNSTRNQ9Y448 316 aa21.55■■□□□ 1.04
ERBB2-214ENST00000583038 ANP32EQ9BTT0 268 aa21.54■■□□□ 1.04
ERBB2-214ENST00000583038 EIF5BO60841 1220 aaKnown RBP21.54■■□□□ 1.04
ERBB2-214ENST00000583038 FHAD1B1AJZ9 1412 aa21.53■■□□□ 1.04
ERBB2-214ENST00000583038 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
ERBB2-214ENST00000583038 TIMELESSQ9UNS1 1208 aa21.52■■□□□ 1.04
ERBB2-214ENST00000583038 CARD11Q9BXL7 1154 aa21.51■■□□□ 1.03
ERBB2-214ENST00000583038 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
ERBB2-214ENST00000583038 IRX6P78412 446 aaPredicted RBP21.49■■□□□ 1.03
ERBB2-214ENST00000583038 NBR1Q14596 966 aa21.48■■□□□ 1.03
ERBB2-214ENST00000583038 GLIPR1L2Q4G1C9 344 aa21.47■■□□□ 1.03
ERBB2-214ENST00000583038 CCNB3Q8WWL7 1395 aa21.42■■□□□ 1.02
ERBB2-214ENST00000583038 GOLGA6L22H0YM25 854 aa21.41■■□□□ 1.02
ERBB2-214ENST00000583038 NUDCQ9Y266 331 aa21.41■■□□□ 1.02
ERBB2-214ENST00000583038 NCLP19338 710 aaKnown RBP21.39■■□□□ 1.01
ERBB2-214ENST00000583038 CHMP4BQ9H444 224 aaKnown RBP21.37■■□□□ 1.01
ERBB2-214ENST00000583038 C14orf37Q86TY3 774 aa21.36■■□□□ 1.01
ERBB2-214ENST00000583038 MAPK8IP3Q9UPT6 1336 aa21.35■■□□□ 1.01
ERBB2-214ENST00000583038 CARMIL1Q5VZK9 1371 aa21.35■■□□□ 1.01
ERBB2-214ENST00000583038 MS4A1P11836 297 aa21.33■■□□□ 1.01
ERBB2-214ENST00000583038 PPP4R2Q9NY27 417 aa21.33■■□□□ 1.01
ERBB2-214ENST00000583038 FTSJ3Q8IY81 847 aaKnown RBP21.33■■□□□ 1.01
ERBB2-214ENST00000583038 SUPT16HQ9Y5B9 1047 aaKnown RBP21.33■■□□□ 1.01
ERBB2-214ENST00000583038 CASC1Q6TDU7 716 aa21.31■■□□□ 1
ERBB2-214ENST00000583038 PPM1GO15355 546 aaPredicted RBP21.31■■□□□ 1
ERBB2-214ENST00000583038 SIN3AQ96ST3 1273 aa21.31■■□□□ 1
ERBB2-214ENST00000583038 PNNQ9H307 717 aaKnown RBP21.28■■□□□ 1
ERBB2-214ENST00000583038 POGKQ9P215 609 aa21.28■■□□□ 1
ERBB2-214ENST00000583038 ARXQ96QS3 562 aa21.27■■□□□ 1
ERBB2-214ENST00000583038 TMF1P82094 1093 aa21.27■■□□□ 1
ERBB2-214ENST00000583038 CUX2O14529 1486 aa21.27■□□□□ 0.99
ERBB2-214ENST00000583038 TRIM44Q96DX7 344 aaPredicted RBP21.26■□□□□ 0.99
ERBB2-214ENST00000583038 ZBTB7CA1YPR0 619 aa21.26■□□□□ 0.99
ERBB2-214ENST00000583038 ERCC6Q03468 1493 aa21.25■□□□□ 0.99
ERBB2-214ENST00000583038 ARID4BQ4LE39 1312 aaPredicted RBP21.25■□□□□ 0.99
ERBB2-214ENST00000583038 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
ERBB2-214ENST00000583038 KANK1Q14678 1352 aa21.24■□□□□ 0.99
ERBB2-214ENST00000583038 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
ERBB2-214ENST00000583038 CCER2I3L3R5 266 aa21.23■□□□□ 0.99
ERBB2-214ENST00000583038 CDK11BP21127 795 aaKnown RBP21.22■□□□□ 0.99
ERBB2-214ENST00000583038 A0A0G2JS52 829 aa21.21■□□□□ 0.99
ERBB2-214ENST00000583038 SETD5Q9C0A6 1442 aa21.2■□□□□ 0.98
ERBB2-214ENST00000583038 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
ERBB2-214ENST00000583038 SOGA1O94964 1423 aa21.18■□□□□ 0.98
ERBB2-214ENST00000583038 HDGFP51858 240 aaKnown RBP21.18■□□□□ 0.98
ERBB2-214ENST00000583038 HAP1P54257 671 aaPredicted RBP21.18■□□□□ 0.98
ERBB2-214ENST00000583038 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
ERBB2-214ENST00000583038 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
ERBB2-214ENST00000583038 ARHGAP35Q9NRY4 1499 aa21.15■□□□□ 0.98
ERBB2-214ENST00000583038 ZRSR1Q15695 479 aaKnown RBP21.15■□□□□ 0.98
ERBB2-214ENST00000583038 FRAT1Q92837 279 aaPredicted RBP21.11■□□□□ 0.97
ERBB2-214ENST00000583038 CC2D1BQ5T0F9 858 aaKnown RBP21.11■□□□□ 0.97
ERBB2-214ENST00000583038 LAS1LQ9Y4W2 734 aaKnown RBP21.11■□□□□ 0.97
ERBB2-214ENST00000583038 CARMIL2Q6F5E8 1435 aa21.1■□□□□ 0.97
ERBB2-214ENST00000583038 EIF4G1Q04637 1599 aaKnown RBP21.09■□□□□ 0.97
ERBB2-214ENST00000583038 FMN1Q68DA7 1419 aa21.09■□□□□ 0.97
ERBB2-214ENST00000583038 U2SURPO15042 1029 aaKnown RBP21.09■□□□□ 0.97
ERBB2-214ENST00000583038 PLEKHG5O94827 1062 aa21.09■□□□□ 0.97
ERBB2-214ENST00000583038 ERICH6BQ5W0A0 696 aa21.09■□□□□ 0.97
ERBB2-214ENST00000583038 RGS3P49796 1198 aa21.08■□□□□ 0.97
ERBB2-214ENST00000583038 CFAP44Q96MT7 982 aa21.07■□□□□ 0.96
ERBB2-214ENST00000583038 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
ERBB2-214ENST00000583038 PTMAP06454 111 aaKnown RBP21.05■□□□□ 0.96
ERBB2-214ENST00000583038 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
ERBB2-214ENST00000583038 SENP3-EIF4A1A0A087X0R7 540 aa21.04■□□□□ 0.96
ERBB2-214ENST00000583038 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
ERBB2-214ENST00000583038 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
ERBB2-214ENST00000583038 NOP58Q9Y2X3 529 aaKnown RBP21.03■□□□□ 0.96
ERBB2-214ENST00000583038 PKD2Q13563 968 aa21.02■□□□□ 0.96
ERBB2-214ENST00000583038 HSPA5P11021 654 aaKnown RBP21.02■□□□□ 0.96
ERBB2-214ENST00000583038 MORC1Q86VD1 984 aa21.02■□□□□ 0.96
ERBB2-214ENST00000583038 KTN1Q86UP2 1357 aaKnown RBP21.01■□□□□ 0.95
ERBB2-214ENST00000583038 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
ERBB2-214ENST00000583038 SRPK2P78362 688 aaKnown RBP20.99■□□□□ 0.95
ERBB2-214ENST00000583038 LMOD2Q6P5Q4 547 aa20.99■□□□□ 0.95
ERBB2-214ENST00000583038 B4GALNT3Q6L9W6 998 aa20.97■□□□□ 0.95
ERBB2-214ENST00000583038 OS9Q13438 667 aaPredicted RBP20.97■□□□□ 0.95
ERBB2-214ENST00000583038 RALBP1Q15311 655 aa20.97■□□□□ 0.95
ERBB2-214ENST00000583038 EFCAB2Q5VUJ9 269 aa20.97■□□□□ 0.95
ERBB2-214ENST00000583038 ANKRD30AQ9BXX3 1397 aa20.97■□□□□ 0.95
ERBB2-214ENST00000583038 HSP90AB1P08238 724 aaKnown RBP20.96■□□□□ 0.95
ERBB2-214ENST00000583038 KANK4Q5T7N3 995 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms