RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
DDX42-211ENST00000580108 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
DDX42-211ENST00000580108 PELP1Q8IZL8 1130 aaKnown RBP9.69□□□□□ -0.86
DDX42-211ENST00000580108 KIF12Q96FN5 646 aa9.66□□□□□ -0.86
DDX42-211ENST00000580108 NUBP1P53384 320 aa9.65□□□□□ -0.86
DDX42-211ENST00000580108 ASTLQ6HA08 431 aaPredicted RBP9.64□□□□□ -0.87
DDX42-211ENST00000580108 ATMINO43313 823 aaPredicted RBP9.63□□□□□ -0.87
DDX42-211ENST00000580108 POTEB2H3BUK9 544 aa9.62□□□□□ -0.87
DDX42-211ENST00000580108 TRPC6Q9Y210 931 aa9.62□□□□□ -0.87
DDX42-211ENST00000580108 MAP3K13O43283 966 aa9.61□□□□□ -0.87
DDX42-211ENST00000580108 ZBTB47Q9UFB7 747 aaPredicted RBP9.58□□□□□ -0.88
DDX42-211ENST00000580108 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
DDX42-211ENST00000580108 BMP2KQ9NSY1 1161 aaPredicted RBP9.56□□□□□ -0.88
DDX42-211ENST00000580108 METRNQ9UJH8 293 aa9.55□□□□□ -0.88
DDX42-211ENST00000580108 FBXO3Q9UK99 471 aa9.55□□□□□ -0.88
DDX42-211ENST00000580108 OTUD5Q96G74 571 aa9.54□□□□□ -0.88
DDX42-211ENST00000580108 SLC39A7Q92504 469 aa9.52□□□□□ -0.89
DDX42-211ENST00000580108 POTEJP0CG39 1038 aa9.51□□□□□ -0.89
DDX42-211ENST00000580108 C7P10643 843 aa9.51□□□□□ -0.89
DDX42-211ENST00000580108 VASPP50552 380 aaPredicted RBP9.51□□□□□ -0.89
DDX42-211ENST00000580108 FAM212AQ96EL1 285 aa9.51□□□□□ -0.89
DDX42-211ENST00000580108 TIE1P35590 1138 aa9.5□□□□□ -0.89
DDX42-211ENST00000580108 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
DDX42-211ENST00000580108 POTEFA5A3E0 1075 aa9.48□□□□□ -0.89
DDX42-211ENST00000580108 TTLL13PA6NNM8 815 aa9.48□□□□□ -0.89
DDX42-211ENST00000580108 IFNL1Q8IU54 200 aa9.48□□□□□ -0.89
DDX42-211ENST00000580108 SGIP1Q9BQI5 828 aa9.48□□□□□ -0.89
DDX42-211ENST00000580108 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
DDX42-211ENST00000580108 PYGBP11216 843 aa9.42□□□□□ -0.9
DDX42-211ENST00000580108 KLHL34Q8N239 644 aa9.41□□□□□ -0.9
DDX42-211ENST00000580108 TRIM35Q9UPQ4 493 aa9.41□□□□□ -0.9
DDX42-211ENST00000580108 COLQQ9Y215 455 aaPredicted RBP9.41□□□□□ -0.9
DDX42-211ENST00000580108 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
DDX42-211ENST00000580108 TMEM106CQ9BVX2 250 aa9.37□□□□□ -0.91
DDX42-211ENST00000580108 PCDHB8Q9UN66 801 aa9.36□□□□□ -0.91
DDX42-211ENST00000580108 IER5LQ5T953 404 aa9.35□□□□□ -0.91
DDX42-211ENST00000580108 GSE1Q14687 1217 aa9.33□□□□□ -0.92
DDX42-211ENST00000580108 SEC24BO95487 1268 aa9.32□□□□□ -0.92
DDX42-211ENST00000580108 MAMSTRQ6ZN01 415 aa9.32□□□□□ -0.92
DDX42-211ENST00000580108 SCUBE2Q9NQ36 999 aa9.3□□□□□ -0.92
DDX42-211ENST00000580108 IRX5P78411 483 aaPredicted RBP9.29□□□□□ -0.92
DDX42-211ENST00000580108 CHRM1P11229 460 aaPredicted RBP9.28□□□□□ -0.92
DDX42-211ENST00000580108 SPOCK2Q92563 424 aa9.28□□□□□ -0.92
DDX42-211ENST00000580108 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
DDX42-211ENST00000580108 ZNF467Q7Z7K2 595 aaPredicted RBP9.24□□□□□ -0.93
DDX42-211ENST00000580108 POTEMA6NI47 508 aa9.23□□□□□ -0.93
DDX42-211ENST00000580108 PLCG2P16885 1265 aa9.23□□□□□ -0.93
DDX42-211ENST00000580108 CIZ1Q9ULV3 898 aaPredicted RBP9.22□□□□□ -0.93
DDX42-211ENST00000580108 POTEGQ6S5H5 508 aa9.21□□□□□ -0.94
DDX42-211ENST00000580108 PSEN1P49768 467 aa9.2□□□□□ -0.94
DDX42-211ENST00000580108 OCEL1Q9H607 264 aa9.2□□□□□ -0.94
DDX42-211ENST00000580108 PDCD7Q8N8D1 485 aaKnown RBP9.17□□□□□ -0.94
DDX42-211ENST00000580108 FAM163AQ96GL9 167 aaPredicted RBP9.17□□□□□ -0.94
DDX42-211ENST00000580108 PDAP1Q13442 181 aaKnown RBP9.15□□□□□ -0.94
DDX42-211ENST00000580108 SLAIN1Q8ND83 568 aa9.14□□□□□ -0.95
DDX42-211ENST00000580108 MKRN3Q13064 507 aaKnown RBP9.12□□□□□ -0.95
DDX42-211ENST00000580108 GOLGA2Q08379 1002 aa9.11□□□□□ -0.95
DDX42-211ENST00000580108 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
DDX42-211ENST00000580108 CABP2Q9NPB3 220 aa9.09□□□□□ -0.95
DDX42-211ENST00000580108 PLSCR2Q9NRY7 297 aa9.09□□□□□ -0.95
DDX42-211ENST00000580108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.09□□□□□ -0.952e-9■□□□□ 11.1
DDX42-211ENST00000580108 DPY19L2Q6NUT2 758 aa9.06□□□□□ -0.96
DDX42-211ENST00000580108 TRIM41Q8WV44 630 aa9.06□□□□□ -0.96
DDX42-211ENST00000580108 RNF25Q96BH1 459 aaPredicted RBP9.06□□□□□ -0.96
DDX42-211ENST00000580108 ST18O60284 1047 aa9.05□□□□□ -0.96
DDX42-211ENST00000580108 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.05□□□□□ -0.96
DDX42-211ENST00000580108 L3MBTL3Q96JM7 780 aaPredicted RBP9.02□□□□□ -0.97
DDX42-211ENST00000580108 C3orf67Q6ZVT6 689 aa9.01□□□□□ -0.97
DDX42-211ENST00000580108 PCDH10Q9P2E7 1040 aa9.01□□□□□ -0.97
DDX42-211ENST00000580108 EFCAB3Q8N7B9 438 aa9□□□□□ -0.97
DDX42-211ENST00000580108 RIOK3O14730 519 aaKnown RBP8.99□□□□□ -0.97
DDX42-211ENST00000580108 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.97□□□□□ -0.97
DDX42-211ENST00000580108 ZFP91Q96JP5 570 aaPredicted RBP8.97□□□□□ -0.97
DDX42-211ENST00000580108 BOLA1Q9Y3E2 137 aa8.95□□□□□ -0.98
DDX42-211ENST00000580108 SNPHO15079 494 aa8.93□□□□□ -0.98
DDX42-211ENST00000580108 VGFO15240 615 aaPredicted RBP8.93□□□□□ -0.98
DDX42-211ENST00000580108 CDAN1Q8IWY9 1227 aa8.93□□□□□ -0.98
DDX42-211ENST00000580108 MARVELD3Q96A59 401 aa8.92□□□□□ -0.98
DDX42-211ENST00000580108 MS4A4AQ96JQ5 239 aa8.92□□□□□ -0.98
DDX42-211ENST00000580108 TMEM121BQ9BXQ6 578 aaPredicted RBP8.92□□□□□ -0.98
DDX42-211ENST00000580108 PHF8Q9UPP1 1060 aa8.89□□□□□ -0.99
DDX42-211ENST00000580108 G3V3G9 751 aa8.88□□□□□ -0.99
DDX42-211ENST00000580108 SOX12O15370 315 aa8.87□□□□□ -0.99
DDX42-211ENST00000580108 PKD2Q13563 968 aa8.87□□□□□ -0.99
DDX42-211ENST00000580108 MICALL2Q8IY33 904 aa8.87□□□□□ -0.99
DDX42-211ENST00000580108 HOXB3P14651 431 aaPredicted RBP8.86□□□□□ -0.99
DDX42-211ENST00000580108 TMEM92Q6UXU6 159 aa8.86□□□□□ -0.99
DDX42-211ENST00000580108 BCL11BQ9C0K0 894 aaPredicted RBP8.86□□□□□ -0.99
DDX42-211ENST00000580108 ECM2O94769 699 aaPredicted RBP8.85□□□□□ -0.99
DDX42-211ENST00000580108 POTEB3A0JP26 581 aa8.83□□□□□ -1
DDX42-211ENST00000580108 RGL2O15211 777 aa8.83□□□□□ -1
DDX42-211ENST00000580108 POTEBQ6S5H4 581 aa8.83□□□□□ -1
DDX42-211ENST00000580108 FBXO22Q8NEZ5 403 aa8.83□□□□□ -1
DDX42-211ENST00000580108 EMP3P54852 163 aa8.82□□□□□ -1
DDX42-211ENST00000580108 STK24Q9Y6E0 443 aa8.82□□□□□ -1
DDX42-211ENST00000580108 CCDC180Q9P1Z9 1646 aa8.8□□□□□ -1
DDX42-211ENST00000580108 MFRPQ9BY79 579 aa8.8□□□□□ -1
DDX42-211ENST00000580108 ABCC9O60706 1549 aa8.8□□□□□ -1
DDX42-211ENST00000580108 STK25O00506 426 aa8.79□□□□□ -1
DDX42-211ENST00000580108 NLRP6P59044 892 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms