RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.06
RNF43-203ENST00000577716 BCL11AQ9H165 835 aa14.69□□□□□ -0.06
RNF43-203ENST00000577716 SUPT16HQ9Y5B9 1047 aaKnown RBP14.69□□□□□ -0.06
RNF43-203ENST00000577716 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
RNF43-203ENST00000577716 NBR1Q14596 966 aa14.68□□□□□ -0.06
RNF43-203ENST00000577716 CCNB3Q8WWL7 1395 aa14.67□□□□□ -0.06
RNF43-203ENST00000577716 TSPY4P0CV99 314 aa14.67□□□□□ -0.06
RNF43-203ENST00000577716 TSPY10P0CW01 314 aa14.67□□□□□ -0.06
RNF43-203ENST00000577716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.066e-9■■□□□ 14.4
RNF43-203ENST00000577716 VPS8Q8N3P4 1428 aa14.65□□□□□ -0.06
RNF43-203ENST00000577716 NEFMP07197 916 aa14.63□□□□□ -0.07
RNF43-203ENST00000577716 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
RNF43-203ENST00000577716 ANP32EQ9BTT0 268 aa14.62□□□□□ -0.07
RNF43-203ENST00000577716 RUSC2Q8N2Y8 1516 aa14.62□□□□□ -0.07
RNF43-203ENST00000577716 SENP3-EIF4A1A0A087X0R7 540 aa14.6□□□□□ -0.07
RNF43-203ENST00000577716 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
RNF43-203ENST00000577716 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
RNF43-203ENST00000577716 CHGAP10645 457 aaKnown RBP14.6□□□□□ -0.07
RNF43-203ENST00000577716 CUX2O14529 1486 aa14.59□□□□□ -0.07
RNF43-203ENST00000577716 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
RNF43-203ENST00000577716 CARMIL1Q5VZK9 1371 aa14.57□□□□□ -0.08
RNF43-203ENST00000577716 WDR43Q15061 677 aaKnown RBP eCLIP14.57□□□□□ -0.08
RNF43-203ENST00000577716 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.55□□□□□ -0.08
RNF43-203ENST00000577716 CHMP7Q8WUX9 453 aaPredicted RBP14.55□□□□□ -0.08
RNF43-203ENST00000577716 TIMELESSQ9UNS1 1208 aa14.54□□□□□ -0.08
RNF43-203ENST00000577716 UPF2Q9HAU5 1272 aaKnown RBP14.54□□□□□ -0.08
RNF43-203ENST00000577716 FHAD1B1AJZ9 1412 aa14.52□□□□□ -0.08
RNF43-203ENST00000577716 RGL3Q3MIN7 710 aa14.51□□□□□ -0.09
RNF43-203ENST00000577716 EIF5BO60841 1220 aaKnown RBP14.51□□□□□ -0.09
RNF43-203ENST00000577716 RAPGEF2Q9Y4G8 1499 aa14.51□□□□□ -0.09
RNF43-203ENST00000577716 PPP4R2Q9NY27 417 aa14.5□□□□□ -0.09
RNF43-203ENST00000577716 SLC24A1O60721 1099 aa14.5□□□□□ -0.09
RNF43-203ENST00000577716 CFDP1Q9UEE9 299 aaPredicted RBP14.5□□□□□ -0.09
RNF43-203ENST00000577716 SETD5Q9C0A6 1442 aa14.5□□□□□ -0.09
RNF43-203ENST00000577716 PLEKHD1A6NEE1 506 aa14.48□□□□□ -0.09
RNF43-203ENST00000577716 CCER2I3L3R5 266 aa14.48□□□□□ -0.09
RNF43-203ENST00000577716 CARD11Q9BXL7 1154 aa14.47□□□□□ -0.09
RNF43-203ENST00000577716 HSP90AA1P07900 732 aaKnown RBP14.47□□□□□ -0.09
RNF43-203ENST00000577716 RAB3GAP2Q9H2M9 1393 aa14.46□□□□□ -0.09
RNF43-203ENST00000577716 B4GALNT3Q6L9W6 998 aa14.45□□□□□ -0.1
RNF43-203ENST00000577716 RBM19Q9Y4C8 960 aaKnown RBP14.41□□□□□ -0.1
RNF43-203ENST00000577716 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
RNF43-203ENST00000577716 HSPA5P11021 654 aaKnown RBP14.39□□□□□ -0.11
RNF43-203ENST00000577716 CADPSQ9ULU8 1353 aa14.39□□□□□ -0.11
RNF43-203ENST00000577716 KCNH8Q96L42 1107 aa14.39□□□□□ -0.11
RNF43-203ENST00000577716 ARXQ96QS3 562 aa14.39□□□□□ -0.11
RNF43-203ENST00000577716 PPP1R15AO75807 674 aaPredicted RBP14.38□□□□□ -0.11
RNF43-203ENST00000577716 TDRD9Q8NDG6 1382 aaKnown RBP14.38□□□□□ -0.11
RNF43-203ENST00000577716 NPM1P06748 294 aaKnown RBP eCLIP14.37□□□□□ -0.11
RNF43-203ENST00000577716 ARHGAP35Q9NRY4 1499 aa14.37□□□□□ -0.11
RNF43-203ENST00000577716 ANP32BQ92688 251 aaKnown RBP14.36□□□□□ -0.11
RNF43-203ENST00000577716 TSHZ2Q9NRE2 1034 aa14.36□□□□□ -0.11
RNF43-203ENST00000577716 DDRGK1Q96HY6 314 aa14.36□□□□□ -0.11
RNF43-203ENST00000577716 KNSTRNQ9Y448 316 aa14.36□□□□□ -0.11
RNF43-203ENST00000577716 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
RNF43-203ENST00000577716 NOP58Q9Y2X3 529 aaKnown RBP14.34□□□□□ -0.11
RNF43-203ENST00000577716 FOXD1Q16676 465 aa14.33□□□□□ -0.12
RNF43-203ENST00000577716 ESF1Q9H501 851 aaKnown RBP14.31□□□□□ -0.12
RNF43-203ENST00000577716 EIF4G1Q04637 1599 aaKnown RBP14.31□□□□□ -0.12
RNF43-203ENST00000577716 CDCA8Q53HL2 280 aa14.31□□□□□ -0.12
RNF43-203ENST00000577716 DCAF11Q8TEB1 546 aa14.3□□□□□ -0.12
RNF43-203ENST00000577716 LAS1LQ9Y4W2 734 aaKnown RBP14.3□□□□□ -0.12
RNF43-203ENST00000577716 CC2D1BQ5T0F9 858 aaKnown RBP14.29□□□□□ -0.12
RNF43-203ENST00000577716 PPM1GO15355 546 aaPredicted RBP14.29□□□□□ -0.12
RNF43-203ENST00000577716 BECN1Q14457 450 aa14.28□□□□□ -0.12
RNF43-203ENST00000577716 FHOD3Q2V2M9 1422 aa14.28□□□□□ -0.12
RNF43-203ENST00000577716 SENP3Q9H4L4 574 aaPredicted RBP14.27□□□□□ -0.12
RNF43-203ENST00000577716 RGS3P49796 1198 aa14.27□□□□□ -0.12
RNF43-203ENST00000577716 MPHOSPH9Q99550 1183 aa14.27□□□□□ -0.13
RNF43-203ENST00000577716 NEUROD2Q15784 382 aa14.26□□□□□ -0.13
RNF43-203ENST00000577716 ERICH6BQ5W0A0 696 aa14.25□□□□□ -0.13
RNF43-203ENST00000577716 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
RNF43-203ENST00000577716 PKD2Q13563 968 aa14.25□□□□□ -0.13
RNF43-203ENST00000577716 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
RNF43-203ENST00000577716 L3MBTL2Q969R5 705 aa14.23□□□□□ -0.13
RNF43-203ENST00000577716 IGF1RP08069 1367 aa14.23□□□□□ -0.13
RNF43-203ENST00000577716 CFAP53Q96M91 514 aa14.22□□□□□ -0.13
RNF43-203ENST00000577716 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
RNF43-203ENST00000577716 SYNJ1O43426 1573 aa14.21□□□□□ -0.13
RNF43-203ENST00000577716 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
RNF43-203ENST00000577716 TMF1P82094 1093 aa14.2□□□□□ -0.14
RNF43-203ENST00000577716 MYH16Q9H6N6 1097 aa14.2□□□□□ -0.14
RNF43-203ENST00000577716 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
RNF43-203ENST00000577716 FRAT1Q92837 279 aaPredicted RBP14.19□□□□□ -0.14
RNF43-203ENST00000577716 DEKP35659 375 aaKnown RBP14.18□□□□□ -0.14
RNF43-203ENST00000577716 KIF21BO75037 1637 aa14.18□□□□□ -0.14
RNF43-203ENST00000577716 TNNT2P45379 298 aaPredicted RBP14.18□□□□□ -0.14
RNF43-203ENST00000577716 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
RNF43-203ENST00000577716 FTSJ3Q8IY81 847 aaKnown RBP14.17□□□□□ -0.14
RNF43-203ENST00000577716 RTN4Q9NQC3 1192 aaKnown RBP14.17□□□□□ -0.14
RNF43-203ENST00000577716 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
RNF43-203ENST00000577716 RCAN3Q9UKA8 241 aa14.14□□□□□ -0.15
RNF43-203ENST00000577716 GLIPR1L2Q4G1C9 344 aa14.13□□□□□ -0.15
RNF43-203ENST00000577716 NUDCQ9Y266 331 aa14.13□□□□□ -0.15
RNF43-203ENST00000577716 NUP155O75694 1391 aa14.13□□□□□ -0.15
RNF43-203ENST00000577716 KTN1Q86UP2 1357 aaKnown RBP14.12□□□□□ -0.15
RNF43-203ENST00000577716 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
RNF43-203ENST00000577716 RALBP1Q15311 655 aa14.11□□□□□ -0.15
RNF43-203ENST00000577716 MAPK8IP3Q9UPT6 1336 aa14.1□□□□□ -0.15
RNF43-203ENST00000577716 TRIM44Q96DX7 344 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms