RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 NUBP1P53384 320 aa17.04■□□□□ 0.32
CALCOCO2-226ENST00000575461 DCAF8Q5TAQ9 597 aa17■□□□□ 0.31
CALCOCO2-226ENST00000575461 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.31
CALCOCO2-226ENST00000575461 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
CALCOCO2-226ENST00000575461 GTPBP6O43824 516 aaPredicted RBP16.95■□□□□ 0.3
CALCOCO2-226ENST00000575461 VGFO15240 615 aaPredicted RBP16.93■□□□□ 0.3
CALCOCO2-226ENST00000575461 FAM212AQ96EL1 285 aa16.92■□□□□ 0.3
CALCOCO2-226ENST00000575461 SPDYE1Q8NFV5 336 aaPredicted RBP16.91■□□□□ 0.3
CALCOCO2-226ENST00000575461 STK25O00506 426 aa16.89■□□□□ 0.29
CALCOCO2-226ENST00000575461 CHRM1P11229 460 aaPredicted RBP16.88■□□□□ 0.29
CALCOCO2-226ENST00000575461 RYDENQ9NUL5 291 aaKnown RBP16.87■□□□□ 0.29
CALCOCO2-226ENST00000575461 SGIP1Q9BQI5 828 aa16.85■□□□□ 0.29
CALCOCO2-226ENST00000575461 CREBZFQ9NS37 354 aa16.79■□□□□ 0.28
CALCOCO2-226ENST00000575461 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
CALCOCO2-226ENST00000575461 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
CALCOCO2-226ENST00000575461 MNX1P50219 401 aaPredicted RBP16.74■□□□□ 0.27
CALCOCO2-226ENST00000575461 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
CALCOCO2-226ENST00000575461 STK24Q9Y6E0 443 aa16.73■□□□□ 0.27
CALCOCO2-226ENST00000575461 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
CALCOCO2-226ENST00000575461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.7■□□□□ 0.26
CALCOCO2-226ENST00000575461 ZFP91Q96JP5 570 aaPredicted RBP16.7■□□□□ 0.26
CALCOCO2-226ENST00000575461 CLEC11AQ9Y240 323 aa16.7■□□□□ 0.26
CALCOCO2-226ENST00000575461 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
CALCOCO2-226ENST00000575461 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
CALCOCO2-226ENST00000575461 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
CALCOCO2-226ENST00000575461 PYGBP11216 843 aa16.58■□□□□ 0.24
CALCOCO2-226ENST00000575461 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
CALCOCO2-226ENST00000575461 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
CALCOCO2-226ENST00000575461 REM2Q8IYK8 340 aaPredicted RBP16.55■□□□□ 0.24
CALCOCO2-226ENST00000575461 WDR70Q9NW82 654 aa16.51■□□□□ 0.23
CALCOCO2-226ENST00000575461 TULP1O00294 542 aaPredicted RBP16.5■□□□□ 0.23
CALCOCO2-226ENST00000575461 TMEM132AQ24JP5 1023 aa16.5■□□□□ 0.23
CALCOCO2-226ENST00000575461 TIMELESSQ9UNS1 1208 aa16.5■□□□□ 0.23
CALCOCO2-226ENST00000575461 ZNF467Q7Z7K2 595 aaPredicted RBP16.47■□□□□ 0.23
CALCOCO2-226ENST00000575461 PDAP1Q13442 181 aaKnown RBP16.38■□□□□ 0.21
CALCOCO2-226ENST00000575461 KCNV2Q8TDN2 545 aa16.38■□□□□ 0.21
CALCOCO2-226ENST00000575461 CADPS2Q86UW7 1296 aa16.36■□□□□ 0.21
CALCOCO2-226ENST00000575461 LMOD2Q6P5Q4 547 aa16.35■□□□□ 0.21
CALCOCO2-226ENST00000575461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.35■□□□□ 0.21
CALCOCO2-226ENST00000575461 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
CALCOCO2-226ENST00000575461 TSPYL2Q9H2G4 693 aaPredicted RBP16.29■□□□□ 0.2
CALCOCO2-226ENST00000575461 ARHGEF1Q92888 912 aaKnown RBP16.23■□□□□ 0.19
CALCOCO2-226ENST00000575461 MFRPQ9BY79 579 aa16.23■□□□□ 0.19
CALCOCO2-226ENST00000575461 PSEN1P49768 467 aa16.22■□□□□ 0.19
CALCOCO2-226ENST00000575461 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
CALCOCO2-226ENST00000575461 PCDHB8Q9UN66 801 aa16.21■□□□□ 0.19
CALCOCO2-226ENST00000575461 PCDHB13Q9Y5F0 798 aa16.21■□□□□ 0.19
CALCOCO2-226ENST00000575461 FARP1Q9Y4F1 1045 aaPredicted RBP16.17■□□□□ 0.18
CALCOCO2-226ENST00000575461 ARXQ96QS3 562 aa16.15■□□□□ 0.18
CALCOCO2-226ENST00000575461 E2F4Q16254 413 aa16.14■□□□□ 0.17
CALCOCO2-226ENST00000575461 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
CALCOCO2-226ENST00000575461 CCDC61Q9Y6R9 512 aa16.13■□□□□ 0.17
CALCOCO2-226ENST00000575461 NLRP6P59044 892 aa16.12■□□□□ 0.17
CALCOCO2-226ENST00000575461 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
CALCOCO2-226ENST00000575461 SOX12O15370 315 aa16.09■□□□□ 0.17
CALCOCO2-226ENST00000575461 ZC3H15Q8WU90 426 aaKnown RBP16.09■□□□□ 0.17
CALCOCO2-226ENST00000575461 BRPF1P55201 1214 aaPredicted RBP16.08■□□□□ 0.16
CALCOCO2-226ENST00000575461 PPP1R37O75864 691 aa16.06■□□□□ 0.16
CALCOCO2-226ENST00000575461 FBXO22Q8NEZ5 403 aa16.06■□□□□ 0.16
CALCOCO2-226ENST00000575461 TESPA1A2RU30 521 aaPredicted RBP16.05■□□□□ 0.16
CALCOCO2-226ENST00000575461 EFCAB3Q8N7B9 438 aa16.03■□□□□ 0.16
CALCOCO2-226ENST00000575461 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.16
CALCOCO2-226ENST00000575461 SEMA3EO15041 775 aa15.99■□□□□ 0.15
CALCOCO2-226ENST00000575461 SMYD5Q6GMV2 418 aa15.99■□□□□ 0.15
CALCOCO2-226ENST00000575461 IFNL1Q8IU54 200 aa15.99■□□□□ 0.15
CALCOCO2-226ENST00000575461 CABP2Q9NPB3 220 aa15.99■□□□□ 0.15
CALCOCO2-226ENST00000575461 NEUROD2Q15784 382 aa15.97■□□□□ 0.15
CALCOCO2-226ENST00000575461 PHF8Q9UPP1 1060 aa15.97■□□□□ 0.15
CALCOCO2-226ENST00000575461 PRKAR2AP13861 404 aaKnown RBP15.94■□□□□ 0.14
CALCOCO2-226ENST00000575461 PDE4AP27815 886 aa15.94■□□□□ 0.14
CALCOCO2-226ENST00000575461 SLC24A3Q9HC58 644 aa15.94■□□□□ 0.14
CALCOCO2-226ENST00000575461 KIF12Q96FN5 646 aa15.91■□□□□ 0.14
CALCOCO2-226ENST00000575461 MAP3K13O43283 966 aa15.9■□□□□ 0.14
CALCOCO2-226ENST00000575461 ARIH1Q9Y4X5 557 aaPredicted RBP15.9■□□□□ 0.14
CALCOCO2-226ENST00000575461 NCKAP5LQ9HCH0 1330 aa15.9■□□□□ 0.14
CALCOCO2-226ENST00000575461 MFSD10Q14728 455 aa15.89■□□□□ 0.13
CALCOCO2-226ENST00000575461 LARP6Q9BRS8 491 aaKnown RBP15.89■□□□□ 0.13
CALCOCO2-226ENST00000575461 ZMYND10O75800 440 aa15.88■□□□□ 0.13
CALCOCO2-226ENST00000575461 HOMEZQ8IX15 550 aa15.84■□□□□ 0.13
CALCOCO2-226ENST00000575461 FXR2P51116 673 aaKnown RBP eCLIP15.82■□□□□ 0.12
CALCOCO2-226ENST00000575461 DDX27Q96GQ7 796 aaKnown RBP15.82■□□□□ 0.12
CALCOCO2-226ENST00000575461 CRISPLD2Q9H0B8 497 aa15.82■□□□□ 0.12
CALCOCO2-226ENST00000575461 DAXXQ9UER7 740 aaPredicted RBP15.79■□□□□ 0.12
CALCOCO2-226ENST00000575461 BARGINQ6ZT62 677 aa15.78■□□□□ 0.12
CALCOCO2-226ENST00000575461 CAMK2BQ13554 666 aa15.77■□□□□ 0.12
CALCOCO2-226ENST00000575461 MS4A4AQ96JQ5 239 aa15.77■□□□□ 0.12
CALCOCO2-226ENST00000575461 GOLGA2Q08379 1002 aa15.74■□□□□ 0.11
CALCOCO2-226ENST00000575461 AK7Q96M32 723 aa15.7■□□□□ 0.1
CALCOCO2-226ENST00000575461 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
CALCOCO2-226ENST00000575461 GPIHBP1Q8IV16 184 aa15.65■□□□□ 0.1
CALCOCO2-226ENST00000575461 MKRN3Q13064 507 aaKnown RBP15.63■□□□□ 0.09
CALCOCO2-226ENST00000575461 TMEM106CQ9BVX2 250 aa15.63■□□□□ 0.09
CALCOCO2-226ENST00000575461 KRI1Q8N9T8 703 aaKnown RBP15.61■□□□□ 0.09
CALCOCO2-226ENST00000575461 RBM26Q5T8P6 1007 aaKnown RBP15.6■□□□□ 0.09
CALCOCO2-226ENST00000575461 PPP1R15BQ5SWA1 713 aa15.58■□□□□ 0.08
CALCOCO2-226ENST00000575461 MLLT3P42568 568 aaPredicted RBP15.57■□□□□ 0.08
CALCOCO2-226ENST00000575461 PHF12Q96QT6 1004 aa15.57■□□□□ 0.08
CALCOCO2-226ENST00000575461 SUPT5HO00267 1087 aaKnown RBP15.56■□□□□ 0.08
CALCOCO2-226ENST00000575461 CD44P16070 742 aaKnown RBP15.56■□□□□ 0.08
CALCOCO2-226ENST00000575461 PIP4P2Q8N4L2 257 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms