RNA–Protein interactions for RNA: ENST00000567329.1

USP7-217, Transcript of ubiquitin specific peptidase 7, human

TSL 4

Gene USP7, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP7-217	ENST00000567329	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.3	□□□□□ -0.6
USP7-217	ENST00000567329	PLEKHG5	O94827	1062 aa		11.28	□□□□□ -0.6
USP7-217	ENST00000567329	NUBP1	P53384	320 aa		11.26	□□□□□ -0.61
USP7-217	ENST00000567329	REM2	Q8IYK8	340 aa	Predicted RBP	11.26	□□□□□ -0.61
USP7-217	ENST00000567329	MNX1	P50219	401 aa	Predicted RBP	11.25	□□□□□ -0.61
USP7-217	ENST00000567329	CREBZF	Q9NS37	354 aa		11.25	□□□□□ -0.61
USP7-217	ENST00000567329	ERCC6	Q03468	1493 aa		11.25	□□□□□ -0.61
USP7-217	ENST00000567329	BBX	Q8WY36	941 aa	Predicted RBP	11.23	□□□□□ -0.61
USP7-217	ENST00000567329	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.23	□□□□□ -0.61
USP7-217	ENST00000567329	HAP1	P54257	671 aa	Predicted RBP	11.2	□□□□□ -0.62
USP7-217	ENST00000567329	TRIM41	Q8WV44	630 aa		11.19	□□□□□ -0.62
USP7-217	ENST00000567329	RNF25	Q96BH1	459 aa	Predicted RBP	11.19	□□□□□ -0.62
USP7-217	ENST00000567329	CLEC11A	Q9Y240	323 aa		11.18	□□□□□ -0.62
USP7-217	ENST00000567329	SUPT5H	O00267	1087 aa	Known RBP	11.16	□□□□□ -0.62
USP7-217	ENST00000567329	PITPNM1	O00562	1244 aa		11.16	□□□□□ -0.62
USP7-217	ENST00000567329	MYT1	Q01538	1121 aa		11.16	□□□□□ -0.62
USP7-217	ENST00000567329	PCGF6	Q9BYE7	350 aa		11.16	□□□□□ -0.62
USP7-217	ENST00000567329	PRR29	P0C7W0	189 aa		11.15	□□□□□ -0.62
USP7-217	ENST00000567329	ZEB1	P37275	1124 aa	Predicted RBP	11.15	□□□□□ -0.62
USP7-217	ENST00000567329	NES	P48681	1621 aa		11.15	□□□□□ -0.62
USP7-217	ENST00000567329	GSE1	Q14687	1217 aa		11.14	□□□□□ -0.63
USP7-217	ENST00000567329	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.12	□□□□□ -0.63
USP7-217	ENST00000567329	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.1	□□□□□ -0.63
USP7-217	ENST00000567329	NCAPD3	P42695	1498 aa		11.1	□□□□□ -0.63
USP7-217	ENST00000567329	RASEF	Q8IZ41	740 aa		11.09	□□□□□ -0.63
USP7-217	ENST00000567329	HS6ST3	Q8IZP7	471 aa		11.09	□□□□□ -0.63
USP7-217	ENST00000567329	CHGA	P10645	457 aa	Known RBP	11.08	□□□□□ -0.64
USP7-217	ENST00000567329	VSIG10	Q8N0Z9	540 aa		11.07	□□□□□ -0.64
USP7-217	ENST00000567329	TRIM26	Q12899	539 aa	Predicted RBP	11.06	□□□□□ -0.64
USP7-217	ENST00000567329	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.05	□□□□□ -0.64
USP7-217	ENST00000567329	THOC2	Q8NI27	1593 aa	Known RBP	11.05	□□□□□ -0.64
USP7-217	ENST00000567329	FAM212A	Q96EL1	285 aa		11.05	□□□□□ -0.64
USP7-217	ENST00000567329	ATAD2B	Q9ULI0	1458 aa		11.05	□□□□□ -0.64
USP7-217	ENST00000567329	DCAF8	Q5TAQ9	597 aa		11.04	□□□□□ -0.64
USP7-217	ENST00000567329	CFAP44	Q96MT7	982 aa		11.04	□□□□□ -0.64
USP7-217	ENST00000567329	KDM2A	Q9Y2K7	1162 aa		11.04	□□□□□ -0.64
USP7-217	ENST00000567329	RIOK3	O14730	519 aa	Known RBP	11.01	□□□□□ -0.65
USP7-217	ENST00000567329	CHRM1	P11229	460 aa	Predicted RBP	11.01	□□□□□ -0.65
USP7-217	ENST00000567329	SPRYD3	Q8NCJ5	442 aa		11.01	□□□□□ -0.65
USP7-217	ENST00000567329	SMARCA2	P51531	1590 aa		10.99	□□□□□ -0.65
USP7-217	ENST00000567329	NKX1-1	Q15270	411 aa	Predicted RBP	10.98	□□□□□ -0.65
USP7-217	ENST00000567329	HMGXB3	Q12766	1538 aa		10.97	□□□□□ -0.65
USP7-217	ENST00000567329	KIF21A	Q7Z4S6	1674 aa		10.96	□□□□□ -0.65
USP7-217	ENST00000567329	CHADL	Q6NUI6	762 aa		10.96	□□□□□ -0.65
USP7-217	ENST00000567329	TSHZ2	Q9NRE2	1034 aa		10.96	□□□□□ -0.65
USP7-217	ENST00000567329	SMARCA4	P51532	1647 aa		10.95	□□□□□ -0.66
USP7-217	ENST00000567329	SGIP1	Q9BQI5	828 aa		10.94	□□□□□ -0.66
USP7-217	ENST00000567329	VGF	O15240	615 aa	Predicted RBP	10.93	□□□□□ -0.66
USP7-217	ENST00000567329	PYGB	P11216	843 aa		10.91	□□□□□ -0.66
USP7-217	ENST00000567329	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.9	□□□□□ -0.66
USP7-217	ENST00000567329	LAMC3	Q9Y6N6	1575 aa		10.9	□□□□□ -0.67
USP7-217	ENST00000567329	TAOK2	Q9UL54	1235 aa		10.89	□□□□□ -0.67
USP7-217	ENST00000567329	BCAN	Q96GW7	911 aa		10.88	□□□□□ -0.67
USP7-217	ENST00000567329	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.88	□□□□□ -0.67
USP7-217	ENST00000567329	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.87	□□□□□ -0.67
USP7-217	ENST00000567329	STK25	O00506	426 aa		10.87	□□□□□ -0.67
USP7-217	ENST00000567329	GTPBP6	O43824	516 aa	Predicted RBP	10.87	□□□□□ -0.67
USP7-217	ENST00000567329	ZFP91	Q96JP5	570 aa	Predicted RBP	10.87	□□□□□ -0.67
USP7-217	ENST00000567329	FXR2	P51116	673 aa	Known RBP eCLIP	10.86	□□□□□ -0.67	2e-14	■■□□□ 13.8
USP7-217	ENST00000567329	PDS5B	Q9NTI5	1447 aa		10.84	□□□□□ -0.67
USP7-217	ENST00000567329	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.83	□□□□□ -0.68
USP7-217	ENST00000567329	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.82	□□□□□ -0.68
USP7-217	ENST00000567329	PRKAR2A	P13861	404 aa	Known RBP	10.82	□□□□□ -0.68
USP7-217	ENST00000567329	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.81	□□□□□ -0.68
USP7-217	ENST00000567329	CCDC61	Q9Y6R9	512 aa		10.81	□□□□□ -0.68
USP7-217	ENST00000567329	STK24	Q9Y6E0	443 aa		10.8	□□□□□ -0.68
USP7-217	ENST00000567329	MRC2	Q9UBG0	1479 aa		10.8	□□□□□ -0.68
USP7-217	ENST00000567329	PEG3	Q9GZU2	1588 aa		10.79	□□□□□ -0.68
USP7-217	ENST00000567329	WDR62	O43379	1518 aa		10.79	□□□□□ -0.68
USP7-217	ENST00000567329	LOC105371045	A0A1W2PR82	267 aa		10.78	□□□□□ -0.68
USP7-217	ENST00000567329	MROH2B	Q7Z745	1585 aa		10.77	□□□□□ -0.68
USP7-217	ENST00000567329	CADPS	Q9ULU8	1353 aa		10.76	□□□□□ -0.69
USP7-217	ENST00000567329	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.75	□□□□□ -0.69
USP7-217	ENST00000567329	CHRDL2	Q6WN34	429 aa		10.74	□□□□□ -0.69
USP7-217	ENST00000567329	PIP4P2	Q8N4L2	257 aa		10.74	□□□□□ -0.69
USP7-217	ENST00000567329	ACIN1	Q9UKV3	1341 aa	Known RBP	10.73	□□□□□ -0.69
USP7-217	ENST00000567329	PCDHB8	Q9UN66	801 aa		10.72	□□□□□ -0.69
USP7-217	ENST00000567329	PCDHB13	Q9Y5F0	798 aa		10.72	□□□□□ -0.69
USP7-217	ENST00000567329	RIMBP3C	A6NJZ7	1639 aa		10.72	□□□□□ -0.69
USP7-217	ENST00000567329	RIMBP3B	A6NNM3	1639 aa		10.72	□□□□□ -0.69
USP7-217	ENST00000567329	RIMBP3	Q9UFD9	1639 aa		10.72	□□□□□ -0.69
USP7-217	ENST00000567329	PDAP1	Q13442	181 aa	Known RBP	10.7	□□□□□ -0.7
USP7-217	ENST00000567329	ZNF579	Q8NAF0	562 aa	Known RBP	10.7	□□□□□ -0.7
USP7-217	ENST00000567329	PRKCSH	P14314	528 aa	Predicted RBP	10.68	□□□□□ -0.7
USP7-217	ENST00000567329	CEP164	Q9UPV0	1460 aa		10.68	□□□□□ -0.7
USP7-217	ENST00000567329	RYDEN	Q9NUL5	291 aa	Known RBP	10.66	□□□□□ -0.7
USP7-217	ENST00000567329	IFNL1	Q8IU54	200 aa		10.65	□□□□□ -0.7
USP7-217	ENST00000567329	KIF12	Q96FN5	646 aa		10.65	□□□□□ -0.7
USP7-217	ENST00000567329	FANCD2	Q9BXW9	1451 aa		10.65	□□□□□ -0.7
USP7-217	ENST00000567329	WIZ	O95785	1651 aa		10.65	□□□□□ -0.7
USP7-217	ENST00000567329	CENPB	P07199	599 aa	Predicted RBP	10.64	□□□□□ -0.71
USP7-217	ENST00000567329	PSEN1	P49768	467 aa		10.64	□□□□□ -0.71
USP7-217	ENST00000567329	MFRP	Q9BY79	579 aa		10.63	□□□□□ -0.71
USP7-217	ENST00000567329	URB2	Q14146	1524 aa	Known RBP	10.63	□□□□□ -0.71
USP7-217	ENST00000567329	MAP3K13	O43283	966 aa		10.62	□□□□□ -0.71
USP7-217	ENST00000567329	ARHGEF11	O15085	1522 aa		10.62	□□□□□ -0.71
USP7-217	ENST00000567329	PAK3	O75914	559 aa	Predicted RBP	10.59	□□□□□ -0.71
USP7-217	ENST00000567329	CYB5RL	Q6IPT4	315 aa		10.59	□□□□□ -0.71
USP7-217	ENST00000567329	CADPS2	Q86UW7	1296 aa		10.59	□□□□□ -0.71
USP7-217	ENST00000567329	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms