RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 EVX2Q03828 476 aa23.03■■□□□ 1.28
NIFKP4-201ENST00000567275 CCDC61Q9Y6R9 512 aa22.99■■□□□ 1.27
NIFKP4-201ENST00000567275 AMER1Q5JTC6 1135 aaPredicted RBP22.98■■□□□ 1.27
NIFKP4-201ENST00000567275 ZNF579Q8NAF0 562 aaKnown RBP22.94■■□□□ 1.26
NIFKP4-201ENST00000567275 PHF12Q96QT6 1004 aa22.9■■□□□ 1.26
NIFKP4-201ENST00000567275 PYGBP11216 843 aa22.89■■□□□ 1.25
NIFKP4-201ENST00000567275 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
NIFKP4-201ENST00000567275 PKD2Q13563 968 aa22.88■■□□□ 1.25
NIFKP4-201ENST00000567275 RTN4Q9NQC3 1192 aaKnown RBP22.86■■□□□ 1.25
NIFKP4-201ENST00000567275 ECM2O94769 699 aaPredicted RBP22.83■■□□□ 1.25
NIFKP4-201ENST00000567275 CHRM1P11229 460 aaPredicted RBP22.77■■□□□ 1.24
NIFKP4-201ENST00000567275 KIF12Q96FN5 646 aa22.77■■□□□ 1.24
NIFKP4-201ENST00000567275 SP7Q8TDD2 431 aaPredicted RBP22.74■■□□□ 1.23
NIFKP4-201ENST00000567275 MAP3K13O43283 966 aa22.73■■□□□ 1.23
NIFKP4-201ENST00000567275 CLCN6P51797 869 aa22.73■■□□□ 1.23
NIFKP4-201ENST00000567275 PCDHB13Q9Y5F0 798 aa22.7■■□□□ 1.22
NIFKP4-201ENST00000567275 SGIP1Q9BQI5 828 aa22.67■■□□□ 1.22
NIFKP4-201ENST00000567275 GABBR2O75899 941 aa22.63■■□□□ 1.21
NIFKP4-201ENST00000567275 MS4A3Q96HJ5 214 aa22.62■■□□□ 1.21
NIFKP4-201ENST00000567275 ZNF467Q7Z7K2 595 aaPredicted RBP22.6■■□□□ 1.21
NIFKP4-201ENST00000567275 GALR2O43603 387 aaPredicted RBP22.57■■□□□ 1.2
NIFKP4-201ENST00000567275 IFNL1Q8IU54 200 aa22.57■■□□□ 1.2
NIFKP4-201ENST00000567275 PCDHB8Q9UN66 801 aa22.56■■□□□ 1.2
NIFKP4-201ENST00000567275 RGL2O15211 777 aa22.55■■□□□ 1.2
NIFKP4-201ENST00000567275 RIOK3O14730 519 aaKnown RBP22.52■■□□□ 1.2
NIFKP4-201ENST00000567275 RNF25Q96BH1 459 aaPredicted RBP22.52■■□□□ 1.2
NIFKP4-201ENST00000567275 TAOK2Q9UL54 1235 aa22.44■■□□□ 1.18
NIFKP4-201ENST00000567275 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
NIFKP4-201ENST00000567275 VGFO15240 615 aaPredicted RBP22.39■■□□□ 1.17
NIFKP4-201ENST00000567275 PDAP1Q13442 181 aaKnown RBP22.39■■□□□ 1.17
NIFKP4-201ENST00000567275 TRPC6Q9Y210 931 aa22.38■■□□□ 1.17
NIFKP4-201ENST00000567275 DCBLD2Q96PD2 775 aa22.36■■□□□ 1.17
NIFKP4-201ENST00000567275 PSEN1P49768 467 aa22.35■■□□□ 1.17
NIFKP4-201ENST00000567275 TIE1P35590 1138 aa22.32■■□□□ 1.16
NIFKP4-201ENST00000567275 TMEM106CQ9BVX2 250 aa22.28■■□□□ 1.16
NIFKP4-201ENST00000567275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.27■■□□□ 1.16
NIFKP4-201ENST00000567275 ZFP91Q96JP5 570 aaPredicted RBP22.27■■□□□ 1.16
NIFKP4-201ENST00000567275 BMP2KQ9NSY1 1161 aaPredicted RBP22.26■■□□□ 1.15
NIFKP4-201ENST00000567275 TTLL13PA6NNM8 815 aa22.22■■□□□ 1.15
NIFKP4-201ENST00000567275 STK25O00506 426 aa22.19■■□□□ 1.14
NIFKP4-201ENST00000567275 ATMINO43313 823 aaPredicted RBP22.18■■□□□ 1.14
NIFKP4-201ENST00000567275 ASTLQ6HA08 431 aaPredicted RBP22.17■■□□□ 1.14
NIFKP4-201ENST00000567275 CHGAP10645 457 aaKnown RBP22.15■■□□□ 1.14
NIFKP4-201ENST00000567275 BCL11BQ9C0K0 894 aaPredicted RBP22.15■■□□□ 1.14
NIFKP4-201ENST00000567275 ATN1P54259 1190 aaPredicted RBP22.14■■□□□ 1.13
NIFKP4-201ENST00000567275 STK24Q9Y6E0 443 aa22.14■■□□□ 1.13
NIFKP4-201ENST00000567275 GOLGA2Q08379 1002 aa22.11■■□□□ 1.13
NIFKP4-201ENST00000567275 POTEIP0CG38 1075 aa22.1■■□□□ 1.13
NIFKP4-201ENST00000567275 TRIM35Q9UPQ4 493 aa22.1■■□□□ 1.13
NIFKP4-201ENST00000567275 CABP2Q9NPB3 220 aa22.09■■□□□ 1.13
NIFKP4-201ENST00000567275 HS6ST3Q8IZP7 471 aa22.08■■□□□ 1.13
NIFKP4-201ENST00000567275 MKRN3Q13064 507 aaKnown RBP21.99■■□□□ 1.11
NIFKP4-201ENST00000567275 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
NIFKP4-201ENST00000567275 EFCAB3Q8N7B9 438 aa21.94■■□□□ 1.1
NIFKP4-201ENST00000567275 SLC39A7Q92504 469 aa21.93■■□□□ 1.1
NIFKP4-201ENST00000567275 IER5LQ5T953 404 aa21.89■■□□□ 1.09
NIFKP4-201ENST00000567275 C7P10643 843 aa21.86■■□□□ 1.09
NIFKP4-201ENST00000567275 METRNQ9UJH8 293 aa21.84■■□□□ 1.09
NIFKP4-201ENST00000567275 SOX12O15370 315 aa21.83■■□□□ 1.09
NIFKP4-201ENST00000567275 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
NIFKP4-201ENST00000567275 SEC24BO95487 1268 aa21.81■■□□□ 1.08
NIFKP4-201ENST00000567275 BBXQ8WY36 941 aaPredicted RBP21.8■■□□□ 1.08
NIFKP4-201ENST00000567275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.8■■□□□ 1.08
NIFKP4-201ENST00000567275 PLCG2P16885 1265 aa21.75■■□□□ 1.07
NIFKP4-201ENST00000567275 IRX5P78411 483 aaPredicted RBP21.74■■□□□ 1.07
NIFKP4-201ENST00000567275 PHF8Q9UPP1 1060 aa21.74■■□□□ 1.07
NIFKP4-201ENST00000567275 NLRP6P59044 892 aa21.73■■□□□ 1.07
NIFKP4-201ENST00000567275 NKX1-1Q15270 411 aaPredicted RBP21.73■■□□□ 1.07
NIFKP4-201ENST00000567275 OCEL1Q9H607 264 aa21.73■■□□□ 1.07
NIFKP4-201ENST00000567275 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.73■■□□□ 1.07
NIFKP4-201ENST00000567275 MFRPQ9BY79 579 aa21.71■■□□□ 1.07
NIFKP4-201ENST00000567275 COLQQ9Y215 455 aaPredicted RBP21.69■■□□□ 1.06
NIFKP4-201ENST00000567275 RYDENQ9NUL5 291 aaKnown RBP21.65■■□□□ 1.06
NIFKP4-201ENST00000567275 ILDR1Q86SU0 546 aaPredicted RBP21.64■■□□□ 1.05
NIFKP4-201ENST00000567275 POTEFA5A3E0 1075 aa21.63■■□□□ 1.05
NIFKP4-201ENST00000567275 PDCD7Q8N8D1 485 aaKnown RBP21.62■■□□□ 1.05
NIFKP4-201ENST00000567275 FBXO22Q8NEZ5 403 aa21.62■■□□□ 1.05
NIFKP4-201ENST00000567275 MS4A4AQ96JQ5 239 aa21.57■■□□□ 1.04
NIFKP4-201ENST00000567275 GTPBP6O43824 516 aaPredicted RBP21.53■■□□□ 1.04
NIFKP4-201ENST00000567275 DPY19L2Q6NUT2 758 aa21.53■■□□□ 1.04
NIFKP4-201ENST00000567275 SPRYD3Q8NCJ5 442 aa21.53■■□□□ 1.04
NIFKP4-201ENST00000567275 PAXIP1Q6ZW49 1069 aaPredicted RBP21.52■■□□□ 1.04
NIFKP4-201ENST00000567275 CFAP44Q96MT7 982 aa21.51■■□□□ 1.03
NIFKP4-201ENST00000567275 G3V3G9 751 aa21.48■■□□□ 1.03
NIFKP4-201ENST00000567275 L3MBTL3Q96JM7 780 aaPredicted RBP21.48■■□□□ 1.03
NIFKP4-201ENST00000567275 POTEB2H3BUK9 544 aa21.41■■□□□ 1.02
NIFKP4-201ENST00000567275 PPP1R37O75864 691 aa21.41■■□□□ 1.02
NIFKP4-201ENST00000567275 BOLA1Q9Y3E2 137 aa21.41■■□□□ 1.02
NIFKP4-201ENST00000567275 LHX8Q68G74 356 aa21.36■■□□□ 1.01
NIFKP4-201ENST00000567275 PLCB2Q00722 1185 aa21.33■■□□□ 1.01
NIFKP4-201ENST00000567275 MICALL2Q8IY33 904 aa21.32■■□□□ 1
NIFKP4-201ENST00000567275 POTEJP0CG39 1038 aa21.29■■□□□ 1
NIFKP4-201ENST00000567275 MAMSTRQ6ZN01 415 aa21.28■■□□□ 1
NIFKP4-201ENST00000567275 C3orf67Q6ZVT6 689 aa21.28■■□□□ 1
NIFKP4-201ENST00000567275 TMEM121BQ9BXQ6 578 aaPredicted RBP21.27■■□□□ 1
NIFKP4-201ENST00000567275 SCUBE2Q9NQ36 999 aa21.25■□□□□ 0.99
NIFKP4-201ENST00000567275 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.22■□□□□ 0.99
NIFKP4-201ENST00000567275 OTUD5Q96G74 571 aa21.1■□□□□ 0.97
NIFKP4-201ENST00000567275 HAP1P54257 671 aaPredicted RBP21.06■□□□□ 0.96
NIFKP4-201ENST00000567275 SLAIN1Q8ND83 568 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms